BLASTX nr result

ID: Glycyrrhiza23_contig00019829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019829
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520220.1| PREDICTED: putative E3 ubiquitin-protein lig...   168   4e-40
ref|XP_002516824.1| conserved hypothetical protein [Ricinus comm...   110   2e-22
ref|XP_002277269.1| PREDICTED: putative E3 ubiquitin-protein lig...   108   5e-22
ref|XP_003542905.1| PREDICTED: putative E3 ubiquitin-protein lig...   107   8e-22
ref|XP_002312723.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22

>ref|XP_003520220.1| PREDICTED: putative E3 ubiquitin-protein ligase RF4-like [Glycine
           max]
          Length = 813

 Score =  168 bits (426), Expect = 4e-40
 Identities = 86/119 (72%), Positives = 97/119 (81%)
 Frame = +2

Query: 2   FDEALGKYVPRDERDAQVLKLISRAQELQDELQSWDKWTNQKVMQVTVKLSKLQAEFRSL 181
           FDEALGKYVPRDE+D  +LKLI+R QELQ+EL  W+ WTNQKVMQVT +L KLQAEF++L
Sbjct: 469 FDEALGKYVPRDEKDRLILKLITRVQELQNELHGWNNWTNQKVMQVTNRLGKLQAEFKTL 528

Query: 182 RKEKQXXXXXXXXXXXXXXNAVKRISEMENAMENTKRQVESAASATLMLEAENSLLKKE 358
           RKEKQ              NAVKRISEMENAMENTK+Q+ESAASATL+LEAENSLLKKE
Sbjct: 529 RKEKQDAELLKKDKKIVEENAVKRISEMENAMENTKKQIESAASATLVLEAENSLLKKE 587


>ref|XP_002516824.1| conserved hypothetical protein [Ricinus communis]
           gi|223543912|gb|EEF45438.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 894

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/119 (44%), Positives = 80/119 (67%)
 Frame = +2

Query: 2   FDEALGKYVPRDERDAQVLKLISRAQELQDELQSWDKWTNQKVMQVTVKLSKLQAEFRSL 181
           +D++L ++VPRD++D  ++KL+ RA+ELQ++LQ W +W NQKVMQ   +LSK +AE +SL
Sbjct: 531 YDKSLAQWVPRDKKDEMIMKLVPRARELQNQLQEWTEWANQKVMQAARRLSKDKAELKSL 590

Query: 182 RKEKQXXXXXXXXXXXXXXNAVKRISEMENAMENTKRQVESAASATLMLEAENSLLKKE 358
           R+EK+              N +K+++EMENA+     QVE A SA   LE EN+ L++E
Sbjct: 591 RQEKEEVERLKKEKQTLEENTMKKLTEMENALCKASGQVERANSAVRRLEVENAALRQE 649


>ref|XP_002277269.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Vitis
           vinifera]
          Length = 893

 Score =  108 bits (270), Expect = 5e-22
 Identities = 52/119 (43%), Positives = 78/119 (65%)
 Frame = +2

Query: 2   FDEALGKYVPRDERDAQVLKLISRAQELQDELQSWDKWTNQKVMQVTVKLSKLQAEFRSL 181
           +D++LG++VP+D++D  +LKL+ R +ELQ++LQ W +W NQKVMQ   +L K +AE ++L
Sbjct: 527 YDKSLGQWVPQDKKDEMILKLVPRVRELQNQLQEWTEWANQKVMQAARRLGKDKAELKTL 586

Query: 182 RKEKQXXXXXXXXXXXXXXNAVKRISEMENAMENTKRQVESAASATLMLEAENSLLKKE 358
           R+EK+              N  K++SEMENA+     QVE A +A   LE ENS L++E
Sbjct: 587 RQEKEEVERLKKEKQTLEDNTAKKLSEMENALGKASGQVERANAAVRRLEVENSSLRQE 645


>ref|XP_003542905.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Glycine
           max]
          Length = 883

 Score =  107 bits (268), Expect = 8e-22
 Identities = 52/118 (44%), Positives = 74/118 (62%)
 Frame = +2

Query: 5   DEALGKYVPRDERDAQVLKLISRAQELQDELQSWDKWTNQKVMQVTVKLSKLQAEFRSLR 184
           D +LGK++P+D +D  +LKL+ R +ELQ++LQ W +W NQKVMQ   +LSK +AE ++LR
Sbjct: 519 DRSLGKWIPQDRKDEMILKLVPRVRELQNQLQEWTEWANQKVMQAARRLSKDRAELKTLR 578

Query: 185 KEKQXXXXXXXXXXXXXXNAVKRISEMENAMENTKRQVESAASATLMLEAENSLLKKE 358
           +EK               N +K+ISEMENA+     QVE   +    LE EN+ L+KE
Sbjct: 579 QEKDEVERLKKEKQSLEENTMKKISEMENALSKASAQVERTNADVRKLEVENAALRKE 636


>ref|XP_002312723.1| predicted protein [Populus trichocarpa] gi|222852543|gb|EEE90090.1|
           predicted protein [Populus trichocarpa]
          Length = 762

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/119 (44%), Positives = 79/119 (66%)
 Frame = +2

Query: 2   FDEALGKYVPRDERDAQVLKLISRAQELQDELQSWDKWTNQKVMQVTVKLSKLQAEFRSL 181
           +D++L ++VPRD++D  ++KLI RAQELQ++LQ W +W NQKVMQ   +L K +AE +SL
Sbjct: 422 YDKSLTRWVPRDKKDEMIMKLIPRAQELQNQLQEWTEWANQKVMQAARRLGKDKAELKSL 481

Query: 182 RKEKQXXXXXXXXXXXXXXNAVKRISEMENAMENTKRQVESAASATLMLEAENSLLKKE 358
           R+EK+              + +K+++EMENA+     QVE A SA   LE EN+ L++E
Sbjct: 482 RQEKEEVERLKKEKQTLEESTMKKLTEMENALCKASGQVEIANSAVQRLEVENAALRQE 540


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