BLASTX nr result

ID: Glycyrrhiza23_contig00019806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019806
         (803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591673.1| Ring finger protein [Medicago truncatula] gi...   180   4e-43
gb|AFK46438.1| unknown [Lotus japonicus]                              157   3e-36
gb|AFK47405.1| unknown [Lotus japonicus]                              156   6e-36
ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein A...    94   3e-17
ref|XP_002524078.1| ring finger protein, putative [Ricinus commu...    92   2e-16

>ref|XP_003591673.1| Ring finger protein [Medicago truncatula]
           gi|358346047|ref|XP_003637084.1| Ring finger protein
           [Medicago truncatula] gi|355480721|gb|AES61924.1| Ring
           finger protein [Medicago truncatula]
           gi|355503019|gb|AES84222.1| Ring finger protein
           [Medicago truncatula] gi|388507518|gb|AFK41825.1|
           unknown [Medicago truncatula]
          Length = 156

 Score =  180 bits (456), Expect = 4e-43
 Identities = 101/173 (58%), Positives = 115/173 (66%), Gaps = 1/173 (0%)
 Frame = +1

Query: 61  MNNSSSTDSEAKHNNK-GFEASEFTYIVTFVFGILFLVLSVVVACVRLRVSRXXXXXXTH 237
           MN  ++  SE  HNN  GF+A+ FTYI+  VFG++FLVLS+V+ACVRLR SR        
Sbjct: 1   MNIDNNGTSEPPHNNNNGFDANGFTYILILVFGLVFLVLSIVIACVRLRSSRS------- 53

Query: 238 NNILAILTGIPSRPSRQDDDEIMEEGLRHRTDTSFEGYPKLLYSQVIHQHNKGEGEXXXX 417
            NIL IL+G P  P R +D  IME+GLRH TDTSFEGYPKLLYSQ+  Q N         
Sbjct: 54  RNILNILSGFP--PHRHEDS-IMEQGLRHHTDTSFEGYPKLLYSQI--QKNGSSTSISCS 108

Query: 418 XXXXXXXXXXXXXGDYKESDTLRLLPGCGHLYHLACVDPWLRLHSTCPICRKS 576
                        GDYKESD LRLLP CGHLYH+ACVDPWL LHSTCPICRKS
Sbjct: 109 ICL----------GDYKESDMLRLLPDCGHLYHVACVDPWLVLHSTCPICRKS 151


>gb|AFK46438.1| unknown [Lotus japonicus]
          Length = 163

 Score =  157 bits (396), Expect = 3e-36
 Identities = 85/175 (48%), Positives = 109/175 (62%), Gaps = 3/175 (1%)
 Frame = +1

Query: 61  MNNSSSTDSEAKHNNKGFEASEFTYIVTFVFGILFLVLSVVVACVRLRVSRXXXXXXTHN 240
           M+N+S+  SE  H   G   + FTYI+ FV G++FL+LSV  ACVRLR+S+         
Sbjct: 1   MDNNSN--SEPTHQGGGLGINGFTYIIVFVIGLIFLLLSVGFACVRLRMSQSL------- 51

Query: 241 NILAILTGIPS-RPSRQDDDEIMEEGLR--HRTDTSFEGYPKLLYSQVIHQHNKGEGEXX 411
           NI  IL G P  R + +++ + ME+GLR  H  D SFE YPKLLYS+V+ + +       
Sbjct: 52  NIFNILAGFPPPRTAGEEESQDMEQGLRDDHNMDNSFESYPKLLYSEVVKKSDSSVSSCC 111

Query: 412 XXXXXXXXXXXXXXXGDYKESDTLRLLPGCGHLYHLACVDPWLRLHSTCPICRKS 576
                          GDYKE+DTLR+LP CGH+YHLACVDPWL+ HSTCPICRKS
Sbjct: 112 SICL-----------GDYKEADTLRMLPDCGHVYHLACVDPWLKFHSTCPICRKS 155


>gb|AFK47405.1| unknown [Lotus japonicus]
          Length = 163

 Score =  156 bits (394), Expect = 6e-36
 Identities = 86/175 (49%), Positives = 109/175 (62%), Gaps = 3/175 (1%)
 Frame = +1

Query: 61  MNNSSSTDSEAKHNNKGFEASEFTYIVTFVFGILFLVLSVVVACVRLRVSRXXXXXXTHN 240
           M+N+S+  SE  H   G   + FTYI+ FV G++FL+LSV  ACVRLR+S+         
Sbjct: 1   MDNNSN--SEPTHQGGGLGINGFTYIIVFVIGLIFLLLSVGFACVRLRMSQSL------- 51

Query: 241 NILAILTGIPS-RPSRQDDDEIMEEGLR--HRTDTSFEGYPKLLYSQVIHQHNKGEGEXX 411
           NI  IL G P  R + +++ + ME+GLR  H  D SFE YPKLLYS+V  + +       
Sbjct: 52  NIFNILAGFPPPRTAGEEESQDMEQGLRDDHNMDNSFESYPKLLYSEVEKRSDSSVSSCC 111

Query: 412 XXXXXXXXXXXXXXXGDYKESDTLRLLPGCGHLYHLACVDPWLRLHSTCPICRKS 576
                          GDYKE+DTLR+LP CGH+YHLACVDPWL+LHSTCPICRKS
Sbjct: 112 SICL-----------GDYKEADTLRMLPDCGHVYHLACVDPWLKLHSTCPICRKS 155


>ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein ATL71-like [Cucumis
           sativus]
          Length = 172

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 58/154 (37%), Positives = 74/154 (48%), Gaps = 3/154 (1%)
 Frame = +1

Query: 127 FTYIVTFVFGILFLVLSVVVA---CVRLRVSRXXXXXXTHNNILAILTGIPSRPSRQDDD 297
           F Y +    G+L L+ ++++A   C R  +S         N         P +   + D 
Sbjct: 20  FGYGIGVSLGLLILITTILLASYYCTRNGLSSSVVQRTPPNRS-------PPQAVGEMDS 72

Query: 298 EIMEEGLRHRTDTSFEGYPKLLYSQVIHQHNKGEGEXXXXXXXXXXXXXXXXXGDYKESD 477
            +++ GL   T TS   YPKLLYS+   Q N                       DYK SD
Sbjct: 73  VVVDIGLDQETITS---YPKLLYSEAKLQKNDSTASCCSICL-----------ADYKNSD 118

Query: 478 TLRLLPGCGHLYHLACVDPWLRLHSTCPICRKSP 579
            LRLLP CGHL+HL CVDPWLRLH TCP+CR SP
Sbjct: 119 VLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSP 152


>ref|XP_002524078.1| ring finger protein, putative [Ricinus communis]
           gi|223536646|gb|EEF38288.1| ring finger protein,
           putative [Ricinus communis]
          Length = 172

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 63/176 (35%), Positives = 79/176 (44%), Gaps = 3/176 (1%)
 Frame = +1

Query: 61  MNNSSSTDSEAKHNNKGFEASEFTYIVTFVFGILFLVLSVVVA---CVRLRVSRXXXXXX 231
           MNN+SS       N+ G     F Y +    GIL L+ ++ +A   C R    +      
Sbjct: 1   MNNTSSGGGFLGSNDIG----GFGYGIGVSIGILLLITTITLASYFCTRNHQQQQQSMQT 56

Query: 232 THNNILAILTGIPSRPSRQDDDEIMEEGLRHRTDTSFEGYPKLLYSQVIHQHNKGEGEXX 411
              N           P  +  D ++E G+   T    + YPKLLYSQ    HN       
Sbjct: 57  RRRN------RSEEPPDDRLQDIVVEVGIDEAT---LKNYPKLLYSQA-KLHNTDT---- 102

Query: 412 XXXXXXXXXXXXXXXGDYKESDTLRLLPGCGHLYHLACVDPWLRLHSTCPICRKSP 579
                           DYK +D LRLLP CGHL+HL CVDPWLRLH TCP+CR SP
Sbjct: 103 ------TATCCSICLADYKSTDMLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRNSP 152


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