BLASTX nr result

ID: Glycyrrhiza23_contig00019803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019803
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Gly...   130   1e-28
ref|XP_002324039.1| f-box family protein [Populus trichocarpa] g...   120   2e-25
emb|CBI22162.3| unnamed protein product [Vitis vinifera]              113   1e-23
ref|XP_002517477.1| conserved hypothetical protein [Ricinus comm...   109   3e-22
emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera]   109   3e-22

>ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Glycine max]
          Length = 501

 Score =  130 bits (327), Expect = 1e-28
 Identities = 72/142 (50%), Positives = 93/142 (65%), Gaps = 7/142 (4%)
 Frame = +3

Query: 63  ITDLNEDSMAHCATYLTLRDVCNLAMTSTSLKRLAYSDSVWQHLFTERWHQRLPL----S 230
           ITDLNED +AHCA +L+L DVCN+AMTS++LKRLAYSD +WQ  F E WH  LP     +
Sbjct: 15  ITDLNEDCIAHCAGHLSLGDVCNMAMTSSALKRLAYSDFIWQRFFREHWHLELPWHSSGN 74

Query: 231 GTVTGARELYLTRRTALQQXXXXXXXXXXXXXY-KPFNHLLLHQNRIFFT-QGSIVEIID 404
           G   GAR +Y+ R  AL+Q             + KPF+ LLLH+N +F++ QGS VE+ID
Sbjct: 75  GGGGGARGVYMVRHAALRQFKFVDPFVLDFDAHAKPFDQLLLHKNHLFYSQQGSRVEVID 134

Query: 405 LDG-YQKGGKGFVHTLSDHKAR 467
           LDG  ++    F H+L  HKAR
Sbjct: 135 LDGCLKRTTTDFFHSLCYHKAR 156


>ref|XP_002324039.1| f-box family protein [Populus trichocarpa]
           gi|222867041|gb|EEF04172.1| f-box family protein
           [Populus trichocarpa]
          Length = 498

 Score =  120 bits (300), Expect = 2e-25
 Identities = 68/141 (48%), Positives = 88/141 (62%), Gaps = 6/141 (4%)
 Frame = +3

Query: 63  ITDLNEDSMAHCATYLTLRDVCNLAMTSTSLKRLAYSDSVWQHLFTERWHQRLPLSGTVT 242
           ITDLNEDS+AHCATYL+L+D+ NLA T  SLKR+AYSD +WQH F E W + L      +
Sbjct: 14  ITDLNEDSLAHCATYLSLQDLSNLATTCKSLKRVAYSDPIWQHCFREHWPRELL---QTS 70

Query: 243 GARELYLTRRTALQQ--XXXXXXXXXXXXXYKPFNHLLLHQNRIFFTQ----GSIVEIID 404
           G RE YL RR A+QQ                KPF+H++L +N I F+Q    GS+V++ +
Sbjct: 71  GLREAYLKRRVAVQQFKFVDPLVADLYITGAKPFDHIILDKNDISFSQGSYPGSLVQMTN 130

Query: 405 LDGYQKGGKGFVHTLSDHKAR 467
           +D +  G  G V  LSDH AR
Sbjct: 131 IDSFLNGRDG-VTALSDHNAR 150


>emb|CBI22162.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  113 bits (283), Expect = 1e-23
 Identities = 64/138 (46%), Positives = 87/138 (63%), Gaps = 3/138 (2%)
 Frame = +3

Query: 63  ITDLNEDSMAHCATYLTLRDVCNLAMTSTSLKRLAYSDSVWQHLFTERWHQRLPLS-GTV 239
           ITDL+ DS+A C  YL L+D+ N+AM+   LK +AYSDS+WQ  F+E W  ++P +    
Sbjct: 7   ITDLDADSLAECGRYLDLQDLSNMAMSCKFLKTVAYSDSIWQRWFSEHWPLQMPSTFSQA 66

Query: 240 TGARELYLTRRTALQQ-XXXXXXXXXXXXXYKPFNHLLLHQNR-IFFTQGSIVEIIDLDG 413
           +G RE YL RRTAL+Q               KPFNHLLL +N  I F+QGS+++I+ + G
Sbjct: 67  SGVRESYLARRTALRQFKFVDPLAAQFHTDAKPFNHLLLDKNNDIIFSQGSVIQIMKM-G 125

Query: 414 YQKGGKGFVHTLSDHKAR 467
               G+ FV TL+DH AR
Sbjct: 126 SIFSGRDFVVTLNDHNAR 143


>ref|XP_002517477.1| conserved hypothetical protein [Ricinus communis]
           gi|223543488|gb|EEF45019.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 209

 Score =  109 bits (272), Expect = 3e-22
 Identities = 60/138 (43%), Positives = 81/138 (58%), Gaps = 3/138 (2%)
 Frame = +3

Query: 63  ITDLNEDSMAHCATYLTLRDVCNLAMTSTSLKRLAYSDSVWQHLFTERWHQRLPLSGTVT 242
           +TDLNEDS+AHCA YL+L+D+ NLA+T   LKR+AYSDS+W   + ERW   +P  G + 
Sbjct: 8   LTDLNEDSLAHCANYLSLQDLSNLAITCKCLKRVAYSDSIWHRCYRERWPLEVP--GGLL 65

Query: 243 GARELYLTRRTALQQ--XXXXXXXXXXXXXYKPFNHLLLHQNRIFFTQGSIVEIIDLDGY 416
             RE Y  R  +L Q                KPF+H++L  N I F+QGS V+I+ +D +
Sbjct: 66  SLREAYSERLASLHQFKCTDPLCADLYTNDSKPFDHVMLDNNDIIFSQGSSVQIVKIDSF 125

Query: 417 QKGGKGFVHT-LSDHKAR 467
             G      T L+DH AR
Sbjct: 126 LNGIDSEATTILTDHNAR 143


>emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera]
          Length = 491

 Score =  109 bits (272), Expect = 3e-22
 Identities = 63/138 (45%), Positives = 86/138 (62%), Gaps = 3/138 (2%)
 Frame = +3

Query: 63  ITDLNEDSMAHCATYLTLRDVCNLAMTSTSLKRLAYSDSVWQHLFTERWHQRLPLS-GTV 239
           ITDL+ DS+A    YL L+D+ N+AM+   LK +AYSDS+WQ  F+E W  ++P +    
Sbjct: 7   ITDLDADSLAEYGRYLDLQDLSNMAMSCKFLKTVAYSDSIWQRWFSEHWPLQMPSTFSQA 66

Query: 240 TGARELYLTRRTALQQ-XXXXXXXXXXXXXYKPFNHLLLHQNR-IFFTQGSIVEIIDLDG 413
           +G RE YL RRTAL+Q               KPFNHLLL +N  I F+QGS+++I+ + G
Sbjct: 67  SGVRESYLARRTALRQFKFVDPLAAQFHTDAKPFNHLLLDKNNDIIFSQGSVIQIMKM-G 125

Query: 414 YQKGGKGFVHTLSDHKAR 467
               G+ FV TL+DH AR
Sbjct: 126 SIFSGRDFVVTLNDHNAR 143


Top