BLASTX nr result

ID: Glycyrrhiza23_contig00019801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019801
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589591.1| Replication factor C large subunit [Medicago...   273   1e-71
ref|XP_003601043.1| ATPase family AAA domain-containing protein ...   251   4e-65
ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784...   250   9e-65
ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784...   236   1e-60
emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]   224   6e-57

>ref|XP_003589591.1| Replication factor C large subunit [Medicago truncatula]
           gi|355478639|gb|AES59842.1| Replication factor C large
           subunit [Medicago truncatula]
          Length = 1178

 Score =  273 bits (698), Expect = 1e-71
 Identities = 131/158 (82%), Positives = 142/158 (89%)
 Frame = -1

Query: 483 VDILFPEDHGCIAAIQHIAETAKGPIILTSNSNNAGLPDNFVRLHVPFSLPLPDELLCHL 304
           VDILFPED GCIAAIQHIAETAKGPIILTSNS  AGLP+NF RLHV FSLPLPDELL HL
Sbjct: 486 VDILFPEDRGCIAAIQHIAETAKGPIILTSNSKKAGLPNNFCRLHVSFSLPLPDELLRHL 545

Query: 303 YRVCVTEEVNINPLLLEKFIQSCDRDIRKTIMHLQFWFQNKKYKKDRKVQTAYGSLPFDL 124
           + VC TEEV+ NPLL+EKFIQSCDRDIRKTI+HLQFWFQNKKY KD+KVQT YGSLPFDL
Sbjct: 546 FTVCATEEVDANPLLMEKFIQSCDRDIRKTILHLQFWFQNKKYSKDKKVQTLYGSLPFDL 605

Query: 123 EAGHQILPKIMPWNFPSELSELIEKEVAKSITTMEKAS 10
           EAGH+ILPK++PW+FPSELS+LIE EV KSI TME  S
Sbjct: 606 EAGHKILPKMIPWSFPSELSKLIENEVTKSIATMENNS 643


>ref|XP_003601043.1| ATPase family AAA domain-containing protein [Medicago truncatula]
            gi|355490091|gb|AES71294.1| ATPase family AAA
            domain-containing protein [Medicago truncatula]
          Length = 1283

 Score =  251 bits (641), Expect = 4e-65
 Identities = 124/163 (76%), Positives = 136/163 (83%), Gaps = 2/163 (1%)
 Frame = -1

Query: 483  VDILFPEDHGCIAAIQHIAETAKGPIILTSNSNNAGLPDNFVRLHVPFSLPLPDELLCHL 304
            VDILFPED GCIAAIQ IAETAKGPIILTSN +N GLPDNF RLH+ FSLP P ELLCHL
Sbjct: 606  VDILFPEDRGCIAAIQQIAETAKGPIILTSNCDNPGLPDNFDRLHISFSLPTPKELLCHL 665

Query: 303  YRVCVT--EEVNINPLLLEKFIQSCDRDIRKTIMHLQFWFQNKKYKKDRKVQTAYGSLPF 130
            Y VCV   E V+I+PLLLEKFIQSCD DIRKT+MHLQFW Q+K ++KDRKVQT Y SLPF
Sbjct: 666  YSVCVCLREGVSIHPLLLEKFIQSCDGDIRKTLMHLQFWLQSKIFRKDRKVQTGYVSLPF 725

Query: 129  DLEAGHQILPKIMPWNFPSELSELIEKEVAKSITTMEKASCSQ 1
            DLE GHQILPKIMPW+FPSE+SEL+E E  KSI  ME+ S  Q
Sbjct: 726  DLEVGHQILPKIMPWDFPSEISELVENEFVKSINKMEEDSSVQ 768


>ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784209 [Glycine max]
          Length = 1199

 Score =  250 bits (638), Expect = 9e-65
 Identities = 121/158 (76%), Positives = 133/158 (84%)
 Frame = -1

Query: 483  VDILFPEDHGCIAAIQHIAETAKGPIILTSNSNNAGLPDNFVRLHVPFSLPLPDELLCHL 304
            VDIL PED GCIAAIQ IAETAKGPIILTSNS+N GLPDNF  LHV F LP P ELLCHL
Sbjct: 527  VDILSPEDRGCIAAIQQIAETAKGPIILTSNSDNPGLPDNFDVLHVSFVLPSPKELLCHL 586

Query: 303  YRVCVTEEVNINPLLLEKFIQSCDRDIRKTIMHLQFWFQNKKYKKDRKVQTAYGSLPFDL 124
            Y VC+TE VNI+PLLLEKFI SCD DIRK+IMHLQFWFQ K+++KD K QT YGSLPFDL
Sbjct: 587  YTVCLTEGVNIHPLLLEKFIHSCDGDIRKSIMHLQFWFQGKRFQKDGKAQTHYGSLPFDL 646

Query: 123  EAGHQILPKIMPWNFPSELSELIEKEVAKSITTMEKAS 10
            E GHQILPKIMPW+FPSE+S+LIE E+ KS   ME+ S
Sbjct: 647  ELGHQILPKIMPWDFPSEISKLIENEITKSTNKMEETS 684


>ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784968 [Glycine max]
          Length = 1197

 Score =  236 bits (602), Expect = 1e-60
 Identities = 118/158 (74%), Positives = 129/158 (81%)
 Frame = -1

Query: 483 VDILFPEDHGCIAAIQHIAETAKGPIILTSNSNNAGLPDNFVRLHVPFSLPLPDELLCHL 304
           VDIL PED GCIAAIQ IAETAKGPIILTS   N GLP NF  LHV F LP P ELLCHL
Sbjct: 532 VDILSPEDRGCIAAIQQIAETAKGPIILTSV--NPGLPGNFDVLHVSFMLPSPQELLCHL 589

Query: 303 YRVCVTEEVNINPLLLEKFIQSCDRDIRKTIMHLQFWFQNKKYKKDRKVQTAYGSLPFDL 124
           Y VC+TE VNI+PLLLEKFI SCD DIRK+IMHLQFWFQ+K+++KD   QT YGSLPFDL
Sbjct: 590 YTVCLTEGVNIHPLLLEKFIHSCDGDIRKSIMHLQFWFQSKRFQKDVMTQTCYGSLPFDL 649

Query: 123 EAGHQILPKIMPWNFPSELSELIEKEVAKSITTMEKAS 10
           E GHQILPKIMPW+FPSE+SELIE E+AK    ME+ S
Sbjct: 650 ELGHQILPKIMPWDFPSEISELIENEIAKLTNIMEENS 687


>emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]
          Length = 1170

 Score =  224 bits (571), Expect = 6e-57
 Identities = 108/160 (67%), Positives = 125/160 (78%)
 Frame = -1

Query: 483 VDILFPEDHGCIAAIQHIAETAKGPIILTSNSNNAGLPDNFVRLHVPFSLPLPDELLCHL 304
           VDI FPED G IAAIQ +AETAK PIILTSNSNN  LPDN  RL V F+LP P ELLCH 
Sbjct: 468 VDITFPEDRGLIAAIQQLAETAKRPIILTSNSNNPVLPDNLDRLEVCFTLPSPKELLCHA 527

Query: 303 YRVCVTEEVNINPLLLEKFIQSCDRDIRKTIMHLQFWFQNKKYKKDRKVQTAYGSLPFDL 124
           Y VC  E+ NI P L+E+FI+ C  DIRKT+MHLQFW Q K+Y++DRK    YG L FDL
Sbjct: 528 YMVCAAEKTNIQPWLIERFIEYCQGDIRKTLMHLQFWCQGKRYRQDRKAHKIYGPLSFDL 587

Query: 123 EAGHQILPKIMPWNFPSELSELIEKEVAKSITTMEKASCS 4
           EAGHQILPKI+PW+FPS+LSEL+EKE+AKS++ ME  S S
Sbjct: 588 EAGHQILPKIIPWDFPSQLSELVEKEIAKSLSKMEGDSSS 627


Top