BLASTX nr result

ID: Glycyrrhiza23_contig00019760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019760
         (1214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528870.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   377   e-102
ref|XP_003622915.1| DEAD-box ATP-dependent RNA helicase [Medicag...   341   2e-91
ref|XP_002518204.1| dead box ATP-dependent RNA helicase, putativ...   321   3e-85
ref|XP_004163501.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   266   8e-69
ref|XP_004147170.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   266   8e-69

>ref|XP_003528870.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like [Glycine
           max]
          Length = 810

 Score =  377 bits (967), Expect = e-102
 Identities = 211/328 (64%), Positives = 233/328 (71%), Gaps = 6/328 (1%)
 Frame = -3

Query: 966 MEEVAA---SSQRKVKRTKQALEAGNPELERIDSLPRNSAIPQQNEDDPFSIFIGSNELE 796
           ME  AA   SSQRK KR K+A    +PEL+R+DSLP NSA+PQ ++DD FS+FIGSNELE
Sbjct: 1   MEAAAATANSSQRKPKR-KRASAKSDPELDRLDSLPWNSALPQNDDDDAFSLFIGSNELE 59

Query: 795 GGFFSLEEIDEAEYGLDIPDPEDDNRXXXXXXXXXXXXXXQHEVDG---APSDMLKAEFN 625
           GGF SLEEIDEAEYGL IP+PE D R              + + DG   A SD    E  
Sbjct: 60  GGFLSLEEIDEAEYGLSIPEPEVDKRKTKKKKSEQNENVKKQQQDGVDSACSDDTVVEAE 119

Query: 624 GETVXXXXXXXXXXXXXXXXXXXXXXXXXXEQPNXXXXXXXXXXXXXDNIDETEFYAWNE 445
            +                            E  +             +++DETEFYAWNE
Sbjct: 120 LDESLKSKEKKKKKKKTKNKKKDAREDQTVEPSDAGLDTNVKDDIGEEDVDETEFYAWNE 179

Query: 444 LRLHPLLMKAIYKLGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTLAFGLPILQRLL 265
           LRLHPLL+KAI KLGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTLAFGLPILQRLL
Sbjct: 180 LRLHPLLLKAICKLGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTLAFGLPILQRLL 239

Query: 264 EEREKGAKMVEEKGEESEKYAPTGLLRSLIIAPTRELALQVTDHLKAVAKHINVRVTPIV 85
           EEREK   MV E+GEE EKYA TGLLR+LIIAPTRELALQVTDHLKAVAKHINVRVTPIV
Sbjct: 240 EEREKAGNMVGERGEEPEKYASTGLLRALIIAPTRELALQVTDHLKAVAKHINVRVTPIV 299

Query: 84  GGILAQKQERLLRARPEIVVGTPGRLWE 1
           GGILA+KQERLL+A+PEIVVGTPGRLWE
Sbjct: 300 GGILAEKQERLLKAKPEIVVGTPGRLWE 327


>ref|XP_003622915.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355497930|gb|AES79133.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 798

 Score =  341 bits (874), Expect = 2e-91
 Identities = 195/325 (60%), Positives = 222/325 (68%), Gaps = 6/325 (1%)
 Frame = -3

Query: 957 VAASSQRKVKRTKQALEAGNPELERIDSLPRNSAIPQQNEDDP----FSIFIGSNELEGG 790
           +A +S +K KR  + ++  + EL+R DSLP NS+IPQ +E+D     FS+F GSNELEGG
Sbjct: 1   MAEASIKKSKRKNRTVKPHDAELDRFDSLPWNSSIPQPDENDDNDASFSLFTGSNELEGG 60

Query: 789 FFSLEEIDEAEYGLDIPDPEDDNRXXXXXXXXXXXXXXQHEVDGAPSDMLKAEFNGETVX 610
           F SLEEIDEAEYGL+IPDPE+ +R                + DGA S        GET+ 
Sbjct: 61  FLSLEEIDEAEYGLNIPDPENHDRKHNSKPDKKSNK---QKQDGACS-------GGETMN 110

Query: 609 XXXXXXXXXXXXXXXXXXXXXXXXXEQ-PNXXXXXXXXXXXXXDNIDETEFYAWNELRLH 433
                                     +  N             +NIDETE+YAWNELRLH
Sbjct: 111 DESIKSEVKKKKKKKKNKDAKENQKVELSNTGVNADVKDSVDEENIDETEYYAWNELRLH 170

Query: 432 PLLMKAIYKLGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTLAFGLPILQRLLEERE 253
           P LMKAI+KLGFKEPTPIQKAC+PAAAHQGKDV+GAAETGSGKTLAFGLPILQRLLEERE
Sbjct: 171 PRLMKAIHKLGFKEPTPIQKACVPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEERE 230

Query: 252 KGAKMVEEKGEE-SEKYAPTGLLRSLIIAPTRELALQVTDHLKAVAKHINVRVTPIVGGI 76
           K   +    GEE +EKYA TGLLRSLIIAPTRELALQV  HLKAVAKHINVRVT IVGGI
Sbjct: 231 KAESISGVNGEEAAEKYATTGLLRSLIIAPTRELALQVAKHLKAVAKHINVRVTAIVGGI 290

Query: 75  LAQKQERLLRARPEIVVGTPGRLWE 1
           L +KQERLL+ARPEIVV TPGRLWE
Sbjct: 291 LPEKQERLLKARPEIVVATPGRLWE 315


>ref|XP_002518204.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223542800|gb|EEF44337.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 496

 Score =  321 bits (822), Expect = 3e-85
 Identities = 180/320 (56%), Positives = 213/320 (66%)
 Frame = -3

Query: 960 EVAASSQRKVKRTKQALEAGNPELERIDSLPRNSAIPQQNEDDPFSIFIGSNELEGGFFS 781
           E   +S +KVK  K+     +PELER DSL  NS++   +EDDPFS F+GS+ELEGGF S
Sbjct: 9   EKLPNSNKKVK-WKRKRNNEDPELERFDSLSWNSSL---SEDDPFSGFVGSHELEGGFLS 64

Query: 780 LEEIDEAEYGLDIPDPEDDNRXXXXXXXXXXXXXXQHEVDGAPSDMLKAEFNGETVXXXX 601
           LEEIDE +YG +IP PE                   ++ DG+  +  K E   E      
Sbjct: 65  LEEIDEVDYGFEIPKPEKGKTGKKLKSKKQKH----NDADGSVKEKEKEEKTLEN----- 115

Query: 600 XXXXXXXXXXXXXXXXXXXXXXEQPNXXXXXXXXXXXXXDNIDETEFYAWNELRLHPLLM 421
                                 EQP              +++DE EF+AWNELRLHPLLM
Sbjct: 116 --EKKKKKRKKKKKKAKETQKNEQP--AAVSNGEDDTDGESVDEAEFHAWNELRLHPLLM 171

Query: 420 KAIYKLGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTLAFGLPILQRLLEEREKGAK 241
           K+IY+LGFKEPTPIQKACIP AAHQGKDV+GAAETGSGKTLAFGLPILQRLLEER+K A 
Sbjct: 172 KSIYRLGFKEPTPIQKACIPPAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEERDKAAN 231

Query: 240 MVEEKGEESEKYAPTGLLRSLIIAPTRELALQVTDHLKAVAKHINVRVTPIVGGILAQKQ 61
            ++E GEE+EKY PTGLLR+LII PTRELALQVTDHLK  A  IN++V PIVGG+  +KQ
Sbjct: 232 YLDEMGEEAEKYGPTGLLRALIITPTRELALQVTDHLKEAAMGINIKVVPIVGGMSTEKQ 291

Query: 60  ERLLRARPEIVVGTPGRLWE 1
           ERLL+ARPEI+VGTPGRLWE
Sbjct: 292 ERLLKARPEIIVGTPGRLWE 311


>ref|XP_004163501.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like, partial
           [Cucumis sativus]
          Length = 784

 Score =  266 bits (680), Expect = 8e-69
 Identities = 130/159 (81%), Positives = 144/159 (90%)
 Frame = -3

Query: 477 IDETEFYAWNELRLHPLLMKAIYKLGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTL 298
           +DETE+YAWNELRLHPLLMK+IYKLGFKEPT IQKACIPAAA+QGKDVVGAAETGSGKTL
Sbjct: 190 VDETEYYAWNELRLHPLLMKSIYKLGFKEPTAIQKACIPAAAYQGKDVVGAAETGSGKTL 249

Query: 297 AFGLPILQRLLEEREKGAKMVEEKGEESEKYAPTGLLRSLIIAPTRELALQVTDHLKAVA 118
           AFGLPILQR L+EREK  KM EEKG +++KYAP  LLR+LII PTRELALQVTDHLKAVA
Sbjct: 250 AFGLPILQRFLDEREKSGKMSEEKGVDAKKYAPKSLLRALIITPTRELALQVTDHLKAVA 309

Query: 117 KHINVRVTPIVGGILAQKQERLLRARPEIVVGTPGRLWE 1
             I++RV PIVGG+  +KQERLLR RPE+VVGTPGRLWE
Sbjct: 310 VGIDIRVVPIVGGMSTEKQERLLRTRPEVVVGTPGRLWE 348



 Score = 83.6 bits (205), Expect = 9e-14
 Identities = 45/80 (56%), Positives = 57/80 (71%)
 Frame = -3

Query: 969 AMEEVAASSQRKVKRTKQALEAGNPELERIDSLPRNSAIPQQNEDDPFSIFIGSNELEGG 790
           A E   ++S +K +R K+     +PE ER+DSLP NS+IP    DD  S FIGSN+LEGG
Sbjct: 2   AAESTQSTSSQK-RRLKRKKTQKDPEFERLDSLPWNSSIPI---DDTLSAFIGSNDLEGG 57

Query: 789 FFSLEEIDEAEYGLDIPDPE 730
           F SLEEIDEAEYG+ IP+P+
Sbjct: 58  FLSLEEIDEAEYGMVIPEPD 77


>ref|XP_004147170.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like [Cucumis
           sativus]
          Length = 848

 Score =  266 bits (680), Expect = 8e-69
 Identities = 130/159 (81%), Positives = 144/159 (90%)
 Frame = -3

Query: 477 IDETEFYAWNELRLHPLLMKAIYKLGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTL 298
           +DETE+YAWNELRLHPLLMK+IYKLGFKEPT IQKACIPAAA+QGKDVVGAAETGSGKTL
Sbjct: 210 VDETEYYAWNELRLHPLLMKSIYKLGFKEPTAIQKACIPAAAYQGKDVVGAAETGSGKTL 269

Query: 297 AFGLPILQRLLEEREKGAKMVEEKGEESEKYAPTGLLRSLIIAPTRELALQVTDHLKAVA 118
           AFGLPILQR L+EREK  KM EEKG +++KYAP  LLR+LII PTRELALQVTDHLKAVA
Sbjct: 270 AFGLPILQRFLDEREKSGKMSEEKGVDAKKYAPKSLLRALIITPTRELALQVTDHLKAVA 329

Query: 117 KHINVRVTPIVGGILAQKQERLLRARPEIVVGTPGRLWE 1
             I++RV PIVGG+  +KQERLLR RPE+VVGTPGRLWE
Sbjct: 330 VGIDIRVVPIVGGMSTEKQERLLRTRPEVVVGTPGRLWE 368



 Score = 83.6 bits (205), Expect = 9e-14
 Identities = 45/80 (56%), Positives = 57/80 (71%)
 Frame = -3

Query: 969 AMEEVAASSQRKVKRTKQALEAGNPELERIDSLPRNSAIPQQNEDDPFSIFIGSNELEGG 790
           A E   ++S +K +R K+     +PE ER+DSLP NS+IP    DD  S FIGSN+LEGG
Sbjct: 2   AAESTQSTSSQK-RRLKRKKTQKDPEFERLDSLPWNSSIPI---DDTLSAFIGSNDLEGG 57

Query: 789 FFSLEEIDEAEYGLDIPDPE 730
           F SLEEIDEAEYG+ IP+P+
Sbjct: 58  FLSLEEIDEAEYGMVIPEPD 77


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