BLASTX nr result
ID: Glycyrrhiza23_contig00019708
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00019708 (279 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator c... 139 2e-31 ref|XP_003598665.1| Integrator complex subunit [Medicago truncat... 134 8e-30 ref|XP_002520390.1| conserved hypothetical protein [Ricinus comm... 93 2e-17 ref|XP_002328846.1| predicted protein [Populus trichocarpa] gi|2... 89 5e-16 ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homo... 80 1e-13 >ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 9-like [Glycine max] Length = 794 Score = 139 bits (351), Expect = 2e-31 Identities = 72/93 (77%), Positives = 78/93 (83%), Gaps = 1/93 (1%) Frame = +1 Query: 4 KVQPLLKTLHPKTVLCPEDLRLQIRFSCEKSS-SVLYYTEAETLKVSCQKDSSQSKIAAD 180 +VQPLLKTL PKTVLCPE+LRL I FS EK S SVLYYTEAETLKV +KDSS+ KIA D Sbjct: 606 EVQPLLKTLQPKTVLCPEELRLHINFSSEKKSFSVLYYTEAETLKVPYRKDSSELKIATD 665 Query: 181 LASQFYWKTFKNEGINIASLKGKLLMENGSHYL 279 LAS FYWKTFK E INIA LKG+LLMENG H+L Sbjct: 666 LASHFYWKTFKKEEINIAKLKGELLMENGRHHL 698 >ref|XP_003598665.1| Integrator complex subunit [Medicago truncatula] gi|355487713|gb|AES68916.1| Integrator complex subunit [Medicago truncatula] Length = 536 Score = 134 bits (337), Expect = 8e-30 Identities = 73/125 (58%), Positives = 81/125 (64%), Gaps = 32/125 (25%) Frame = +1 Query: 1 QKVQPLLKTLHPKTVLCPEDLRLQIRFSCEKSSSVLYYTEAETLKVSCQKDSSQSK---- 168 QK+QPLLKTL PKT+L PEDLRL++ FSCEKS SV YYTEAETLKV CQK+SS+ K Sbjct: 315 QKLQPLLKTLQPKTILFPEDLRLKMCFSCEKSFSVSYYTEAETLKVPCQKESSELKMSFS 374 Query: 169 ----------------------------IAADLASQFYWKTFKNEGINIASLKGKLLMEN 264 I ADLASQFYWKTFK EGIN+ LKGKLLMEN Sbjct: 375 CEKSFSVSYCTEPETLKVFCQKESSELKIEADLASQFYWKTFKKEGINVTKLKGKLLMEN 434 Query: 265 GSHYL 279 G H+L Sbjct: 435 GRHHL 439 >ref|XP_002520390.1| conserved hypothetical protein [Ricinus communis] gi|223540437|gb|EEF42006.1| conserved hypothetical protein [Ricinus communis] Length = 705 Score = 93.2 bits (230), Expect = 2e-17 Identities = 49/95 (51%), Positives = 63/95 (66%), Gaps = 2/95 (2%) Frame = +1 Query: 1 QKVQPLLKTLHPKTVLCPEDLRLQIRFSCEKSS--SVLYYTEAETLKVSCQKDSSQSKIA 174 QK+QPLLK LHPK VL PEDL+ I S S SVLYYTE ET ++ KDSS +IA Sbjct: 516 QKIQPLLKILHPKVVLFPEDLKQHINASSSSSHPFSVLYYTENETQEIQSLKDSSDVEIA 575 Query: 175 ADLASQFYWKTFKNEGINIASLKGKLLMENGSHYL 279 DLA++F WK K + +I L+G+LL+++ H L Sbjct: 576 TDLATRFCWKKLKRKDTDITRLEGELLIDDSKHRL 610 >ref|XP_002328846.1| predicted protein [Populus trichocarpa] gi|222839144|gb|EEE77495.1| predicted protein [Populus trichocarpa] Length = 213 Score = 88.6 bits (218), Expect = 5e-16 Identities = 45/91 (49%), Positives = 61/91 (67%) Frame = +1 Query: 1 QKVQPLLKTLHPKTVLCPEDLRLQIRFSCEKSSSVLYYTEAETLKVSCQKDSSQSKIAAD 180 QK QPLL+ L PK VL PEDLR QI+FS S SV YY E ETL V K S +IA++ Sbjct: 25 QKTQPLLEMLRPKEVLFPEDLREQIKFSGSHSFSVFYYAENETLGVPRSKGSVDLEIASN 84 Query: 181 LASQFYWKTFKNEGINIASLKGKLLMENGSH 273 LA+QF W+ ++ ++I L+G+L +++G H Sbjct: 85 LATQFSWRKLDHDDVDITRLEGQLFIDHGKH 115 >ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homolog [Vitis vinifera] gi|296081277|emb|CBI17721.3| unnamed protein product [Vitis vinifera] Length = 774 Score = 80.5 bits (197), Expect = 1e-13 Identities = 45/93 (48%), Positives = 55/93 (59%) Frame = +1 Query: 1 QKVQPLLKTLHPKTVLCPEDLRLQIRFSCEKSSSVLYYTEAETLKVSCQKDSSQSKIAAD 180 QKVQPLLK L PK VL PEDLR + +S S + YY E ETL V K+SS+ +IAAD Sbjct: 586 QKVQPLLKILQPKFVLFPEDLRQLVSYSDTNSHAFFYYCENETLPVPSLKNSSELEIAAD 645 Query: 181 LASQFYWKTFKNEGINIASLKGKLLMENGSHYL 279 L S + + E I I LKG + +G H L Sbjct: 646 LVSLIHCRRLTAESIGIGRLKGDFSVTHGKHQL 678