BLASTX nr result

ID: Glycyrrhiza23_contig00019647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019647
         (839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530841.1| PREDICTED: probable E3 ubiquitin-protein lig...   358   8e-97
gb|ABN06170.1| Regulator of chromosome condensation/beta-lactama...   354   2e-95
emb|CBI34146.3| unnamed protein product [Vitis vinifera]              327   3e-87
ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein lig...   325   6e-87
ref|XP_002331537.1| predicted protein [Populus trichocarpa] gi|2...   317   3e-84

>ref|XP_003530841.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 444

 Score =  358 bits (919), Expect = 8e-97
 Identities = 173/199 (86%), Positives = 181/199 (90%)
 Frame = +2

Query: 56  HAGGLSTPSKVKELPFPIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPR 235
           HAGGLS PSKVKELP+PIAAVSCGGFFTMALT DGQLWNWGANSNYELGRGDKIGGWKPR
Sbjct: 245 HAGGLSIPSKVKELPYPIAAVSCGGFFTMALTVDGQLWNWGANSNYELGRGDKIGGWKPR 304

Query: 236 PIPSLENVRIIQIASGGYHSLALTDDGKVLSWXXXXXXXXXXXSIQNQKIPTVVEALAHE 415
           P+PSLENV+IIQ+ASGGYHSLALTDDGKVLSW           SIQNQKIP VVEALAHE
Sbjct: 305 PVPSLENVKIIQLASGGYHSLALTDDGKVLSWGHGGQGQLGHGSIQNQKIPAVVEALAHE 364

Query: 416 HIIYISCGGSSSAAVTDKGKLYMWGNASDSQLGVPGLPEVQSSPVEVNFLMEDDGLGPHK 595
           +IIYISCGGSSSAAVTD GKLYMWGNA+DSQLG+PGLP VQS PVEVNFLMEDDGLGPHK
Sbjct: 365 NIIYISCGGSSSAAVTDNGKLYMWGNANDSQLGIPGLPPVQSCPVEVNFLMEDDGLGPHK 424

Query: 596 VLSIANGASHAMCLALRES 652
           VLS+A GASHAMCLALRES
Sbjct: 425 VLSVAIGASHAMCLALRES 443



 Score = 82.8 bits (203), Expect = 9e-14
 Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
 Frame = +2

Query: 74  TPSKVKELPFPI-----AAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRP 238
           TP + + LP P        +SCG  F  +L  DG LW WG      LG G +   + P  
Sbjct: 87  TPGRRRLLPSPPKRALEVGLSCG-LFHSSLIVDGALWIWGKGDGGRLGFGHENPLFVPTL 145

Query: 239 IPSLENVRIIQIASGGYHSLALTDDGKVLSWXXXXXXXXXXXSIQNQKIPTVVEALAHEH 418
            P L+N  ++ +A GG HS+ALT DG+V +W               +  P +V+      
Sbjct: 146 NPHLDN--LLSVALGGLHSVALTSDGEVFTWGYGGFGALGHSVYHRELFPRLVKGSWEGT 203

Query: 419 IIYISCGGSSSAAVTDKGKLYMWG-NASDSQLGV-PG 523
           I +I+  G+ +AA+T+ G+LY+WG +  D +LG+ PG
Sbjct: 204 IKHIATSGTHTAAITESGELYIWGRDEGDGRLGLGPG 240


>gb|ABN06170.1| Regulator of chromosome condensation/beta-lactamase-inhibitor
           protein II [Medicago truncatula]
          Length = 444

 Score =  354 bits (908), Expect = 2e-95
 Identities = 167/199 (83%), Positives = 181/199 (90%)
 Frame = +2

Query: 56  HAGGLSTPSKVKELPFPIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPR 235
           HAGGLS P KVKELPFP+AAVSCGGFFT+ALTE+GQLWNWGANSNYELGRGD+IGGW+PR
Sbjct: 245 HAGGLSIPCKVKELPFPVAAVSCGGFFTLALTEEGQLWNWGANSNYELGRGDRIGGWRPR 304

Query: 236 PIPSLENVRIIQIASGGYHSLALTDDGKVLSWXXXXXXXXXXXSIQNQKIPTVVEALAHE 415
           P+PSLE VR+IQIASGGYHSLALTDDGKVLSW           S++NQKIPT+VEA+AHE
Sbjct: 305 PVPSLEKVRVIQIASGGYHSLALTDDGKVLSWGHGGQGQLGHGSVENQKIPTLVEAIAHE 364

Query: 416 HIIYISCGGSSSAAVTDKGKLYMWGNASDSQLGVPGLPEVQSSPVEVNFLMEDDGLGPHK 595
           HIIYISCGG+SSAAVTD+GKLYMWGNASDSQLGVPGLP +Q  PVEVNFLMEDDGLG HK
Sbjct: 365 HIIYISCGGASSAAVTDEGKLYMWGNASDSQLGVPGLPAIQPYPVEVNFLMEDDGLGSHK 424

Query: 596 VLSIANGASHAMCLALRES 652
           VLSIANGASHAMCLALRES
Sbjct: 425 VLSIANGASHAMCLALRES 443



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 49/138 (35%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
 Frame = +2

Query: 116 VSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPIPSLENVRIIQIASGGYHS 295
           +SCG  F   L  DG LW WG      LG G +   + P   P LENV+   +A GG HS
Sbjct: 106 ISCG-LFHSCLVVDGGLWVWGKGDGGRLGLGHESSMFVPTLNPHLENVK--SVALGGLHS 162

Query: 296 LALTDDGKVLSWXXXXXXXXXXXSIQNQKIPTVVEALAHEHIIYISCGGSSSAAVTDKGK 475
           +ALT  G+V +W               +  P +V+      I +I+  G+ +AAVT+ G 
Sbjct: 163 VALTSAGEVFTWGYGGFGALGHSVYTRELFPRLVKGAWEGTIKHIATSGAHTAAVTESGD 222

Query: 476 LYMWG-NASDSQLGV-PG 523
           LY+WG    + +LG+ PG
Sbjct: 223 LYIWGREEGEGRLGLGPG 240



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 23/193 (11%)
 Frame = +2

Query: 107 IAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPIPSLENVRIIQIASGG 286
           + +V+ GG  ++ALT  G+++ WG      LG         PR +       I  IA+ G
Sbjct: 152 VKSVALGGLHSVALTSAGEVFTWGYGGFGALGHSVYTRELFPRLVKGAWEGTIKHIATSG 211

Query: 287 YHSLALTDDGKVLSWXXXXXXXXXXXS-------IQNQKIPTVVEALAHEHIIYISCGGS 445
            H+ A+T+ G +  W                        IP  V+ L    +  +SCGG 
Sbjct: 212 AHTAAVTESGDLYIWGREEGEGRLGLGPGRGPDHAGGLSIPCKVKELPFP-VAAVSCGGF 270

Query: 446 SSAAVTDKGKLYMWGNASDSQLG------------VPGLPEVQ----SSPVEVNFLMEDD 577
            + A+T++G+L+ WG  S+ +LG            VP L +V+    +S    +  + DD
Sbjct: 271 FTLALTEEGQLWNWGANSNYELGRGDRIGGWRPRPVPSLEKVRVIQIASGGYHSLALTDD 330

Query: 578 GLGPHKVLSIANG 616
           G    KVLS  +G
Sbjct: 331 G----KVLSWGHG 339


>emb|CBI34146.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  327 bits (837), Expect = 3e-87
 Identities = 155/195 (79%), Positives = 168/195 (86%)
 Frame = +2

Query: 62  GGLSTPSKVKELPFPIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPI 241
           GGLS PSKVK LP P+AAVSCGGFFTM LT++GQLWNWGANSNYELGRGDK+GGWKP+PI
Sbjct: 132 GGLSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPI 191

Query: 242 PSLENVRIIQIASGGYHSLALTDDGKVLSWXXXXXXXXXXXSIQNQKIPTVVEALAHEHI 421
           PSL++VRIIQIASGGYHSLALTDDGKVLSW           SI+NQKIPTV+EALA EH+
Sbjct: 192 PSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHV 251

Query: 422 IYISCGGSSSAAVTDKGKLYMWGNASDSQLGVPGLPEVQSSPVEVNFLMEDDGLGPHKVL 601
           IYI+CGGSSSAA+TD GKLYMWGNA DSQLGVPGLPE Q  PVEV FLMEDD LGPH VL
Sbjct: 252 IYIACGGSSSAAITDNGKLYMWGNAKDSQLGVPGLPETQPLPVEVKFLMEDDRLGPHNVL 311

Query: 602 SIANGASHAMCLALR 646
           S+A GASHAMCL  R
Sbjct: 312 SVAVGASHAMCLVSR 326


>ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
           vinifera]
          Length = 489

 Score =  325 bits (834), Expect = 6e-87
 Identities = 154/192 (80%), Positives = 167/192 (86%)
 Frame = +2

Query: 62  GGLSTPSKVKELPFPIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPI 241
           GGLS PSKVK LP P+AAVSCGGFFTM LT++GQLWNWGANSNYELGRGDK+GGWKP+PI
Sbjct: 237 GGLSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPI 296

Query: 242 PSLENVRIIQIASGGYHSLALTDDGKVLSWXXXXXXXXXXXSIQNQKIPTVVEALAHEHI 421
           PSL++VRIIQIASGGYHSLALTDDGKVLSW           SI+NQKIPTV+EALA EH+
Sbjct: 297 PSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHV 356

Query: 422 IYISCGGSSSAAVTDKGKLYMWGNASDSQLGVPGLPEVQSSPVEVNFLMEDDGLGPHKVL 601
           IYI+CGGSSSAA+TD GKLYMWGNA DSQLGVPGLPE Q  PVEV FLMEDD LGPH VL
Sbjct: 357 IYIACGGSSSAAITDNGKLYMWGNAKDSQLGVPGLPETQPLPVEVKFLMEDDRLGPHNVL 416

Query: 602 SIANGASHAMCL 637
           S+A GASHAMCL
Sbjct: 417 SVAVGASHAMCL 428



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 1/153 (0%)
 Frame = +2

Query: 62  GGLSTPSKVKELPFPIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPI 241
           G L  PS           +SCG  F  +L  DG+LW WG      LG G +   + P   
Sbjct: 78  GRLCLPSVENASGLTEVGISCG-LFHSSLVVDGKLWIWGKGDGGRLGFGQEYPAFLPTLN 136

Query: 242 PSLENVRIIQIASGGYHSLALTDDGKVLSWXXXXXXXXXXXSIQNQKIPTVVEALAHEHI 421
           P+L+++R    A GG HS+AL+  G+V +W               + +P +VE   +  I
Sbjct: 137 PNLDSIR--STALGGVHSVALSSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWNAKI 194

Query: 422 IYISCGGSSSAAVTDKGKLYMWG-NASDSQLGV 517
            +I+  G+ +AA+T+ G+LY WG +  D +LG+
Sbjct: 195 RHIATAGTHTAAITESGELYTWGRDQGDGRLGL 227


>ref|XP_002331537.1| predicted protein [Populus trichocarpa] gi|222873761|gb|EEF10892.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  317 bits (811), Expect = 3e-84
 Identities = 147/195 (75%), Positives = 165/195 (84%)
 Frame = +2

Query: 62  GGLSTPSKVKELPFPIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPI 241
           GGLS P KVK LP P+A V CGGFFTM LTE+GQ+WNWGANSNYELGRGDK+GGW+P+PI
Sbjct: 125 GGLSIPCKVKTLPVPVATVYCGGFFTMVLTEEGQIWNWGANSNYELGRGDKVGGWRPKPI 184

Query: 242 PSLENVRIIQIASGGYHSLALTDDGKVLSWXXXXXXXXXXXSIQNQKIPTVVEALAHEHI 421
           PSLE+ RIIQIA GGYH LALTD+GKVLSW           SIQ+QKIP V++ALA +H+
Sbjct: 185 PSLEDARIIQIAGGGYHCLALTDEGKVLSWGFGGHGQLGHSSIQSQKIPAVIDALADQHV 244

Query: 422 IYISCGGSSSAAVTDKGKLYMWGNASDSQLGVPGLPEVQSSPVEVNFLMEDDGLGPHKVL 601
           IYI+CGGSSSAA+TDKGKLYMWGNA DSQLG+PGLPEVQS PVEV FLMEDDGLG H VL
Sbjct: 245 IYIACGGSSSAAITDKGKLYMWGNAKDSQLGIPGLPEVQSCPVEVKFLMEDDGLGQHSVL 304

Query: 602 SIANGASHAMCLALR 646
           S++ GASHAMCL LR
Sbjct: 305 SVSVGASHAMCLVLR 319



 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
 Frame = +2

Query: 173 WGANSNYELGRGDKIGGWKPRPIPSLENVRIIQIASGGYHSLALTDDGKVLSWXXXXXXX 352
           WG      LG G +   + P   P L++VR   IA GG HS A+T  G + +W       
Sbjct: 2   WGKGDGGRLGFGHENPAFLPTLNPFLDSVR--SIALGGVHSAAITSLGHIFTWGYGGFGA 59

Query: 353 XXXXSIQNQKIPTVVEALAHEHIIYISCGGSSSAAVTDKGKLYMWG-NASDSQLGV-PG 523
                   +  P +VE      I  IS  G+ +AAVT+ G++Y WG    D +LG+ PG
Sbjct: 60  LGHSVYHRELFPRLVEGSWDGKIRCISTSGTHTAAVTESGEVYTWGREEGDGRLGLGPG 118


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