BLASTX nr result

ID: Glycyrrhiza23_contig00019606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019606
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606114.1| Transmembrane 9 superfamily member [Medicago...   204   6e-51
ref|XP_003540797.1| PREDICTED: putative phagocytic receptor 1b-l...   195   4e-48
ref|XP_003539167.1| PREDICTED: LOW QUALITY PROTEIN: transmembran...   154   9e-36
emb|CBI28324.3| unnamed protein product [Vitis vinifera]              152   2e-35
ref|XP_002274254.1| PREDICTED: putative phagocytic receptor 1b-l...   152   2e-35

>ref|XP_003606114.1| Transmembrane 9 superfamily member [Medicago truncatula]
           gi|355507169|gb|AES88311.1| Transmembrane 9 superfamily
           member [Medicago truncatula]
          Length = 589

 Score =  204 bits (519), Expect = 6e-51
 Identities = 101/129 (78%), Positives = 110/129 (85%)
 Frame = +2

Query: 2   LKSDLKKYSNANEEDREVGWKSIHSDVFRQPPNSSLLFAIVGTGTQXXXXXXXXXXXAFI 181
           LKSDLKKYS+ANEEDREVGWKSIH DVF+ PP+ SL FA+VGTGTQ           AFI
Sbjct: 255 LKSDLKKYSSANEEDREVGWKSIHGDVFKPPPHLSLFFAVVGTGTQLLILLCVLLFLAFI 314

Query: 182 GTLYPYNRGGLSNCLVLLYTLSSVFAGYSAASFHGQFAENGWERSVGLAGILYIGPVFVA 361
           GTLYPY+RGGLS+ +VLL+TLSSVFAGYS ASFHGQFAENGWE+SVGLAGILYIGPVFV 
Sbjct: 315 GTLYPYSRGGLSSWIVLLFTLSSVFAGYSTASFHGQFAENGWEKSVGLAGILYIGPVFVT 374

Query: 362 VSILNIIAI 388
            SILNIIAI
Sbjct: 375 FSILNIIAI 383


>ref|XP_003540797.1| PREDICTED: putative phagocytic receptor 1b-like [Glycine max]
          Length = 589

 Score =  195 bits (495), Expect = 4e-48
 Identities = 99/130 (76%), Positives = 104/130 (80%), Gaps = 1/130 (0%)
 Frame = +2

Query: 2   LKSDLKKYSNANEEDREVGWKSI-HSDVFRQPPNSSLLFAIVGTGTQXXXXXXXXXXXAF 178
           L+SDLKKYSNANEED EVGWKS+ H DVFR PPNSSLLFA+VGTGTQ           A 
Sbjct: 254 LRSDLKKYSNANEEDNEVGWKSLQHGDVFRPPPNSSLLFAVVGTGTQLLILLCVLLFLAL 313

Query: 179 IGTLYPYNRGGLSNCLVLLYTLSSVFAGYSAASFHGQFAENGWERSVGLAGILYIGPVFV 358
           IGTLYPYNRGGL N LVLLY LSSVFAGY+AASFHG FAENGWERS  LA ILY GPVFV
Sbjct: 314 IGTLYPYNRGGLLNWLVLLYALSSVFAGYTAASFHGLFAENGWERSASLAAILYTGPVFV 373

Query: 359 AVSILNIIAI 388
             SILNI+AI
Sbjct: 374 VASILNIVAI 383


>ref|XP_003539167.1| PREDICTED: LOW QUALITY PROTEIN: transmembrane 9 superfamily member
           1-like, partial [Glycine max]
          Length = 421

 Score =  154 bits (388), Expect = 9e-36
 Identities = 77/108 (71%), Positives = 85/108 (78%), Gaps = 5/108 (4%)
 Frame = +2

Query: 2   LKSDLKKYSNANEEDREVGWKSI-HSDVFRQPPNSSLLFAIVGTGTQXXXXXXXXXXX-- 172
           L+SDLKKYSNA EED+EVGWKS+ H DVFR PPNSSLLFA+VGTG+Q             
Sbjct: 233 LRSDLKKYSNATEEDKEVGWKSLQHGDVFRPPPNSSLLFAVVGTGSQLLSCKLLLLCVLL 292

Query: 173 --AFIGTLYPYNRGGLSNCLVLLYTLSSVFAGYSAASFHGQFAENGWE 310
             A IGTLYPYN GGL NCLVLLY L+SVFAGY+AASFHGQFAENGW+
Sbjct: 293 FLALIGTLYPYNHGGLLNCLVLLYALASVFAGYTAASFHGQFAENGWQ 340


>emb|CBI28324.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  152 bits (385), Expect = 2e-35
 Identities = 75/130 (57%), Positives = 94/130 (72%), Gaps = 1/130 (0%)
 Frame = +2

Query: 2   LKSDLKKYSNANEE-DREVGWKSIHSDVFRQPPNSSLLFAIVGTGTQXXXXXXXXXXXAF 178
           LK+DL+K+S  +EE D+EVGWK IH DVFR PP  SL  A++GTGTQ           A 
Sbjct: 301 LKNDLRKFSGGDEEEDKEVGWKYIHGDVFRYPPCMSLFCAVLGTGTQLLIQAAFLFVLAL 360

Query: 179 IGTLYPYNRGGLSNCLVLLYTLSSVFAGYSAASFHGQFAENGWERSVGLAGILYIGPVFV 358
           +G LYPYNRG L   LV+ YTL+SV AGY+A+SF+ QF E GW+RSV L+G LY+GP+FV
Sbjct: 361 LGVLYPYNRGALCTSLVVTYTLTSVVAGYTASSFYNQFVETGWKRSVLLSGTLYLGPLFV 420

Query: 359 AVSILNIIAI 388
            VSILN +A+
Sbjct: 421 MVSILNAVAV 430


>ref|XP_002274254.1| PREDICTED: putative phagocytic receptor 1b-like [Vitis vinifera]
          Length = 608

 Score =  152 bits (385), Expect = 2e-35
 Identities = 75/130 (57%), Positives = 94/130 (72%), Gaps = 1/130 (0%)
 Frame = +2

Query: 2   LKSDLKKYSNANEE-DREVGWKSIHSDVFRQPPNSSLLFAIVGTGTQXXXXXXXXXXXAF 178
           LK+DL+K+S  +EE D+EVGWK IH DVFR PP  SL  A++GTGTQ           A 
Sbjct: 273 LKNDLRKFSGGDEEEDKEVGWKYIHGDVFRYPPCMSLFCAVLGTGTQLLIQAAFLFVLAL 332

Query: 179 IGTLYPYNRGGLSNCLVLLYTLSSVFAGYSAASFHGQFAENGWERSVGLAGILYIGPVFV 358
           +G LYPYNRG L   LV+ YTL+SV AGY+A+SF+ QF E GW+RSV L+G LY+GP+FV
Sbjct: 333 LGVLYPYNRGALCTSLVVTYTLTSVVAGYTASSFYNQFVETGWKRSVLLSGTLYLGPLFV 392

Query: 359 AVSILNIIAI 388
            VSILN +A+
Sbjct: 393 MVSILNAVAV 402


Top