BLASTX nr result

ID: Glycyrrhiza23_contig00019584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019584
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34518.1| unknown [Medicago truncatula]                           85   9e-15
ref|XP_003622238.1| Membrane protein, putative [Medicago truncat...    85   1e-14
ref|XP_003553890.1| PREDICTED: uncharacterized membrane protein ...    72   1e-10
ref|XP_003547686.1| PREDICTED: uncharacterized membrane protein ...    71   1e-10

>gb|AFK34518.1| unknown [Medicago truncatula]
          Length = 582

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 42/55 (76%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
 Frame = -2

Query: 606 TLSDDHAEKHGAPT-TMTRSKSAFPRLISLKSFKGARTYGSGQGSEHIVRDEENS 445
           TL DDH EKHG P+ TM RS+SAF RL+S KS +GARTYGSGQGSEHIVRDEE S
Sbjct: 528 TLCDDHVEKHGLPSPTMNRSQSAFGRLVSFKSVRGARTYGSGQGSEHIVRDEEKS 582


>ref|XP_003622238.1| Membrane protein, putative [Medicago truncatula]
           gi|124359608|gb|ABD28762.2| Steroid nuclear receptor,
           ligand-binding [Medicago truncatula]
           gi|355497253|gb|AES78456.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 582

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 42/55 (76%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
 Frame = -2

Query: 606 TLSDDHAEKHGAPT-TMTRSKSAFPRLISLKSFKGARTYGSGQGSEHIVRDEENS 445
           TL DDH EKHG P+ TM RS+SAF RL+S KS +GARTYGSGQGSEHIVRDEE S
Sbjct: 528 TLYDDHVEKHGLPSPTMNRSQSAFGRLVSFKSVRGARTYGSGQGSEHIVRDEEKS 582


>ref|XP_003553890.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Glycine
           max]
          Length = 580

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 38/54 (70%), Positives = 41/54 (75%)
 Frame = -2

Query: 606 TLSDDHAEKHGAPTTMTRSKSAFPRLISLKSFKGARTYGSGQGSEHIVRDEENS 445
           +LSDD  EK G P  MTRSKSAF RLISLKSFKG R  GS QGS+H+ RD ENS
Sbjct: 528 SLSDDLKEKSGGPI-MTRSKSAFARLISLKSFKGTRANGSAQGSQHVARDLENS 580


>ref|XP_003547686.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Glycine
           max]
          Length = 580

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 37/54 (68%), Positives = 41/54 (75%)
 Frame = -2

Query: 606 TLSDDHAEKHGAPTTMTRSKSAFPRLISLKSFKGARTYGSGQGSEHIVRDEENS 445
           +LSDD  E HG P  MTRSKSAF RLISLKSFKG R  GS QGS+H+ +D ENS
Sbjct: 528 SLSDDLTEIHGGPI-MTRSKSAFARLISLKSFKGTRANGSAQGSQHVAKDLENS 580


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