BLASTX nr result

ID: Glycyrrhiza23_contig00019554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019554
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591195.1| Syntaxin [Medicago truncatula] gi|355480243|...   188   3e-46
ref|XP_003556534.1| PREDICTED: syntaxin-43-like [Glycine max]         172   3e-41
pir||T01773 syntaxin homolog A_IG002P16.16 - Arabidopsis thalian...   166   2e-39
ref|NP_198050.1| syntaxin-41 [Arabidopsis thaliana] gi|79328799|...   166   2e-39
ref|XP_002282882.2| PREDICTED: syntaxin-43-like [Vitis vinifera]...   166   2e-39

>ref|XP_003591195.1| Syntaxin [Medicago truncatula] gi|355480243|gb|AES61446.1| Syntaxin
           [Medicago truncatula]
          Length = 376

 Score =  188 bits (478), Expect = 3e-46
 Identities = 96/114 (84%), Positives = 102/114 (89%)
 Frame = -2

Query: 344 MATRNRTLLFRKYRNALKSVRAXXXXXXXXXXSAGGPVIELVSTSLLNPNRSYAPLSTDD 165
           MATRNRTL+FRKYR+ALKSVRA          S GGPVIELVSTSLLNPNRSYAPLSTDD
Sbjct: 1   MATRNRTLIFRKYRDALKSVRAPSSSSPPSTSSRGGPVIELVSTSLLNPNRSYAPLSTDD 60

Query: 164 PGNSSKGLNPITVGLPPAWVDLSEEISSNVQRARTRMAELAKAHAKALMPSFGD 3
           PG SSKGLNPITVGLPPAWVD+SEEIS+NVQRART+MAEL+KAHAKALMPSFGD
Sbjct: 61  PGGSSKGLNPITVGLPPAWVDVSEEISANVQRARTKMAELSKAHAKALMPSFGD 114


>ref|XP_003556534.1| PREDICTED: syntaxin-43-like [Glycine max]
          Length = 326

 Score =  172 bits (436), Expect = 3e-41
 Identities = 89/116 (76%), Positives = 99/116 (85%), Gaps = 2/116 (1%)
 Frame = -2

Query: 344 MATRNRTLLFRKYRNALKSVR--AXXXXXXXXXXSAGGPVIELVSTSLLNPNRSYAPLST 171
           MATRNRTLLFRK+R+ALKSVR  +          + GGPVIEL +TS LNPNRSYAPLST
Sbjct: 1   MATRNRTLLFRKHRDALKSVRVPSISSPPFTASGAGGGPVIELATTSFLNPNRSYAPLST 60

Query: 170 DDPGNSSKGLNPITVGLPPAWVDLSEEISSNVQRARTRMAELAKAHAKALMPSFGD 3
           +DPGNSS+G N ITVGLPPAWVDLSEEIS+NVQRART+MAELAKAH+KALMPSFGD
Sbjct: 61  EDPGNSSRGPNAITVGLPPAWVDLSEEISANVQRARTKMAELAKAHSKALMPSFGD 116


>pir||T01773 syntaxin homolog A_IG002P16.16 - Arabidopsis thaliana
           gi|2191179|gb|AAB61065.1| contains similarity to
           syntaxin [Arabidopsis thaliana]
          Length = 307

 Score =  166 bits (420), Expect = 2e-39
 Identities = 87/116 (75%), Positives = 96/116 (82%), Gaps = 2/116 (1%)
 Frame = -2

Query: 344 MATRNRTLLFRKYRNALKSVRAXXXXXXXXXXSAGG--PVIELVSTSLLNPNRSYAPLST 171
           MATRNRTLLFRKYRN+L+SVRA           +GG  PVIE+ STSLLNPNRSYAP+ST
Sbjct: 1   MATRNRTLLFRKYRNSLRSVRAPLSSSSLTGTRSGGVGPVIEMASTSLLNPNRSYAPIST 60

Query: 170 DDPGNSSKGLNPITVGLPPAWVDLSEEISSNVQRARTRMAELAKAHAKALMPSFGD 3
           +DPG SSKG   ITVGLPPAWVD+SEEIS N+QRART+MAEL KAHAKALMPSFGD
Sbjct: 61  EDPGTSSKGA--ITVGLPPAWVDVSEEISVNIQRARTKMAELGKAHAKALMPSFGD 114


>ref|NP_198050.1| syntaxin-41 [Arabidopsis thaliana] gi|79328799|ref|NP_001031950.1|
           syntaxin-41 [Arabidopsis thaliana]
           gi|28380151|sp|O65359.1|SYP41_ARATH RecName:
           Full=Syntaxin-41; Short=AtSYP41; Short=AtTLG2a
           gi|3172538|gb|AAC27707.1| syntaxin of plants 41
           [Arabidopsis thaliana] gi|332006253|gb|AED93636.1|
           syntaxin-41 [Arabidopsis thaliana]
           gi|332006254|gb|AED93637.1| syntaxin-41 [Arabidopsis
           thaliana]
          Length = 322

 Score =  166 bits (420), Expect = 2e-39
 Identities = 87/116 (75%), Positives = 96/116 (82%), Gaps = 2/116 (1%)
 Frame = -2

Query: 344 MATRNRTLLFRKYRNALKSVRAXXXXXXXXXXSAGG--PVIELVSTSLLNPNRSYAPLST 171
           MATRNRTLLFRKYRN+L+SVRA           +GG  PVIE+ STSLLNPNRSYAP+ST
Sbjct: 1   MATRNRTLLFRKYRNSLRSVRAPLSSSSLTGTRSGGVGPVIEMASTSLLNPNRSYAPIST 60

Query: 170 DDPGNSSKGLNPITVGLPPAWVDLSEEISSNVQRARTRMAELAKAHAKALMPSFGD 3
           +DPG SSKG   ITVGLPPAWVD+SEEIS N+QRART+MAEL KAHAKALMPSFGD
Sbjct: 61  EDPGTSSKGA--ITVGLPPAWVDVSEEISVNIQRARTKMAELGKAHAKALMPSFGD 114


>ref|XP_002282882.2| PREDICTED: syntaxin-43-like [Vitis vinifera]
           gi|296089745|emb|CBI39564.3| unnamed protein product
           [Vitis vinifera]
          Length = 327

 Score =  166 bits (420), Expect = 2e-39
 Identities = 88/118 (74%), Positives = 97/118 (82%), Gaps = 4/118 (3%)
 Frame = -2

Query: 344 MATRNRTLLFRKYRNALKSVRAXXXXXXXXXXSA----GGPVIELVSTSLLNPNRSYAPL 177
           MA+RNRTLL+RKYR+ALKSVR            +    GGPVIELVSTSLLNPNRSY PL
Sbjct: 1   MASRNRTLLYRKYRDALKSVRVPVSSSLSSSTPSTSSGGGPVIELVSTSLLNPNRSYVPL 60

Query: 176 STDDPGNSSKGLNPITVGLPPAWVDLSEEISSNVQRARTRMAELAKAHAKALMPSFGD 3
           ST+DPGNSSKG   +TVGLPPAWVD+SEEIS+NVQRART+MAEL KAHAKALMPSFGD
Sbjct: 61  STEDPGNSSKGA--LTVGLPPAWVDVSEEISANVQRARTKMAELVKAHAKALMPSFGD 116


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