BLASTX nr result
ID: Glycyrrhiza23_contig00019527
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00019527 (665 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003535521.1| PREDICTED: pumilio homolog 4-like [Glycine max] 107 2e-21 ref|XP_003555443.1| PREDICTED: pumilio homolog 4-like [Glycine max] 104 1e-20 ref|NP_187647.2| protein pumilio 4 [Arabidopsis thaliana] gi|313... 99 6e-19 dbj|BAC42549.1| putative RNA binding protein [Arabidopsis thalia... 99 6e-19 ref|XP_002884790.1| hypothetical protein ARALYDRAFT_897212 [Arab... 97 2e-18 >ref|XP_003535521.1| PREDICTED: pumilio homolog 4-like [Glycine max] Length = 983 Score = 107 bits (267), Expect = 2e-21 Identities = 54/54 (100%), Positives = 54/54 (100%) Frame = -1 Query: 665 QKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGERRIGLLA 504 QKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGERRIGLLA Sbjct: 930 QKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGERRIGLLA 983 >ref|XP_003555443.1| PREDICTED: pumilio homolog 4-like [Glycine max] Length = 1000 Score = 104 bits (260), Expect = 1e-20 Identities = 52/53 (98%), Positives = 53/53 (100%) Frame = -1 Query: 665 QKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGERRIGLL 507 QKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGE+RIGLL Sbjct: 929 QKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGEKRIGLL 981 >ref|NP_187647.2| protein pumilio 4 [Arabidopsis thaliana] gi|313471414|sp|Q9SS47.2|PUM4_ARATH RecName: Full=Pumilio homolog 4; Short=APUM-4; Short=AtPUM4 gi|332641375|gb|AEE74896.1| protein pumilio 4 [Arabidopsis thaliana] Length = 1003 Score = 99.4 bits (246), Expect = 6e-19 Identities = 49/52 (94%), Positives = 51/52 (98%) Frame = -1 Query: 665 QKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGERRIGL 510 QKVLETCDD+SL LILSRIKVHLNALKRYTYGKHIV+RVEKLITTGERRIGL Sbjct: 942 QKVLETCDDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLITTGERRIGL 993 >dbj|BAC42549.1| putative RNA binding protein [Arabidopsis thaliana] gi|28950903|gb|AAO63375.1| At3g10360 [Arabidopsis thaliana] Length = 330 Score = 99.4 bits (246), Expect = 6e-19 Identities = 49/52 (94%), Positives = 51/52 (98%) Frame = -1 Query: 665 QKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGERRIGL 510 QKVLETCDD+SL LILSRIKVHLNALKRYTYGKHIV+RVEKLITTGERRIGL Sbjct: 269 QKVLETCDDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLITTGERRIGL 320 >ref|XP_002884790.1| hypothetical protein ARALYDRAFT_897212 [Arabidopsis lyrata subsp. lyrata] gi|297330630|gb|EFH61049.1| hypothetical protein ARALYDRAFT_897212 [Arabidopsis lyrata subsp. lyrata] Length = 1005 Score = 97.4 bits (241), Expect = 2e-18 Identities = 48/52 (92%), Positives = 51/52 (98%) Frame = -1 Query: 665 QKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGERRIGL 510 QKVLETC+D+SL LILSRIKVHLNALKRYTYGKHIV+RVEKLITTGERRIGL Sbjct: 944 QKVLETCNDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLITTGERRIGL 995