BLASTX nr result

ID: Glycyrrhiza23_contig00019527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019527
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535521.1| PREDICTED: pumilio homolog 4-like [Glycine max]   107   2e-21
ref|XP_003555443.1| PREDICTED: pumilio homolog 4-like [Glycine max]   104   1e-20
ref|NP_187647.2| protein pumilio 4 [Arabidopsis thaliana] gi|313...    99   6e-19
dbj|BAC42549.1| putative RNA binding protein [Arabidopsis thalia...    99   6e-19
ref|XP_002884790.1| hypothetical protein ARALYDRAFT_897212 [Arab...    97   2e-18

>ref|XP_003535521.1| PREDICTED: pumilio homolog 4-like [Glycine max]
          Length = 983

 Score =  107 bits (267), Expect = 2e-21
 Identities = 54/54 (100%), Positives = 54/54 (100%)
 Frame = -1

Query: 665  QKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGERRIGLLA 504
            QKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGERRIGLLA
Sbjct: 930  QKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGERRIGLLA 983


>ref|XP_003555443.1| PREDICTED: pumilio homolog 4-like [Glycine max]
          Length = 1000

 Score =  104 bits (260), Expect = 1e-20
 Identities = 52/53 (98%), Positives = 53/53 (100%)
 Frame = -1

Query: 665  QKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGERRIGLL 507
            QKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGE+RIGLL
Sbjct: 929  QKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGEKRIGLL 981


>ref|NP_187647.2| protein pumilio 4 [Arabidopsis thaliana]
            gi|313471414|sp|Q9SS47.2|PUM4_ARATH RecName: Full=Pumilio
            homolog 4; Short=APUM-4; Short=AtPUM4
            gi|332641375|gb|AEE74896.1| protein pumilio 4
            [Arabidopsis thaliana]
          Length = 1003

 Score = 99.4 bits (246), Expect = 6e-19
 Identities = 49/52 (94%), Positives = 51/52 (98%)
 Frame = -1

Query: 665  QKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGERRIGL 510
            QKVLETCDD+SL LILSRIKVHLNALKRYTYGKHIV+RVEKLITTGERRIGL
Sbjct: 942  QKVLETCDDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLITTGERRIGL 993


>dbj|BAC42549.1| putative RNA binding protein [Arabidopsis thaliana]
           gi|28950903|gb|AAO63375.1| At3g10360 [Arabidopsis
           thaliana]
          Length = 330

 Score = 99.4 bits (246), Expect = 6e-19
 Identities = 49/52 (94%), Positives = 51/52 (98%)
 Frame = -1

Query: 665 QKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGERRIGL 510
           QKVLETCDD+SL LILSRIKVHLNALKRYTYGKHIV+RVEKLITTGERRIGL
Sbjct: 269 QKVLETCDDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLITTGERRIGL 320


>ref|XP_002884790.1| hypothetical protein ARALYDRAFT_897212 [Arabidopsis lyrata subsp.
            lyrata] gi|297330630|gb|EFH61049.1| hypothetical protein
            ARALYDRAFT_897212 [Arabidopsis lyrata subsp. lyrata]
          Length = 1005

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 48/52 (92%), Positives = 51/52 (98%)
 Frame = -1

Query: 665  QKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGERRIGL 510
            QKVLETC+D+SL LILSRIKVHLNALKRYTYGKHIV+RVEKLITTGERRIGL
Sbjct: 944  QKVLETCNDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLITTGERRIGL 995


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