BLASTX nr result

ID: Glycyrrhiza23_contig00019526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019526
         (790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554801.1| PREDICTED: exportin-T-like [Glycine max]          459   e-127
ref|XP_003521842.1| PREDICTED: exportin-T-like [Glycine max]          459   e-127
ref|XP_002521319.1| Exportin-T, putative [Ricinus communis] gi|2...   385   e-105
ref|XP_002304132.1| predicted protein [Populus trichocarpa] gi|2...   377   e-102
ref|XP_002273606.1| PREDICTED: exportin-T [Vitis vinifera] gi|29...   375   e-102

>ref|XP_003554801.1| PREDICTED: exportin-T-like [Glycine max]
          Length = 983

 Score =  459 bits (1181), Expect = e-127
 Identities = 229/263 (87%), Positives = 238/263 (90%)
 Frame = +2

Query: 2   EKPSICRLCVEKLCFSNLVQVQFWCLQTLHEVIQTRYSTMTPDEKHMIRGSVFSIVCFED 181
           EKP ICRLC+EKLCFSNLVQVQFWCLQTLHEVI+TRY TMTPDE+HMIRGSVFSIVC ED
Sbjct: 35  EKPLICRLCIEKLCFSNLVQVQFWCLQTLHEVIRTRYLTMTPDERHMIRGSVFSIVCLED 94

Query: 182 KNLIRVLEGPAFIKNKLAQVLITLIYFEYPLIWSSVFVDFLPHLSKGNIVIDMFCRVLNA 361
           KNL RVLEGPAFIKNKLAQVLITLIYFEYPL+WSSVFVDF PHLSKGN+VIDMFCRVLNA
Sbjct: 95  KNLTRVLEGPAFIKNKLAQVLITLIYFEYPLVWSSVFVDFFPHLSKGNVVIDMFCRVLNA 154

Query: 362 LDDELISLDYHRTPEELTVAGRVKDAMRQQCVPQIVRAWYDIVSMYRNSDQELCTSVLDS 541
           LDDELI+LDY RTPEELTVAGRVKDAMRQQCV QIVR WYDIVSMYRNSDQELCTSVLDS
Sbjct: 155 LDDELINLDYPRTPEELTVAGRVKDAMRQQCVCQIVRVWYDIVSMYRNSDQELCTSVLDS 214

Query: 542 MRRYISWIDIGLIVNDAFVPLLFDLILVGTPSDQLRGAAVRCLLAVVSKRMEPXXXXXXX 721
           MRRYISWIDIGLIVNDAF+PLLFDLILVG  S QLRGAAVRCLLAVVSKRMEP       
Sbjct: 215 MRRYISWIDIGLIVNDAFIPLLFDLILVGPLSVQLRGAAVRCLLAVVSKRMEPQSKLSLL 274

Query: 722 XXXXXXRVFRLVTQDGDAELVSE 790
                 RV RLVT+DGDAELVS+
Sbjct: 275 RSLQISRVLRLVTEDGDAELVSD 297


>ref|XP_003521842.1| PREDICTED: exportin-T-like [Glycine max]
          Length = 986

 Score =  459 bits (1181), Expect = e-127
 Identities = 228/263 (86%), Positives = 237/263 (90%)
 Frame = +2

Query: 2   EKPSICRLCVEKLCFSNLVQVQFWCLQTLHEVIQTRYSTMTPDEKHMIRGSVFSIVCFED 181
           EKP ICRLC+EKLCFSNLVQVQFWCLQTLHEVI+TRY TMTPDE+HMIRGSVFSIVC ED
Sbjct: 35  EKPLICRLCIEKLCFSNLVQVQFWCLQTLHEVIRTRYLTMTPDERHMIRGSVFSIVCLED 94

Query: 182 KNLIRVLEGPAFIKNKLAQVLITLIYFEYPLIWSSVFVDFLPHLSKGNIVIDMFCRVLNA 361
           KNL RVLEGPAFIKNKLAQVLITLIYFEYPL+WSSVFVDF PHLSKGN+VIDMFCRVLNA
Sbjct: 95  KNLTRVLEGPAFIKNKLAQVLITLIYFEYPLVWSSVFVDFFPHLSKGNVVIDMFCRVLNA 154

Query: 362 LDDELISLDYHRTPEELTVAGRVKDAMRQQCVPQIVRAWYDIVSMYRNSDQELCTSVLDS 541
           LDDELISLDY RTPEEL VAGRVKDAMRQQCVPQIVRAWYDIVSMYRNSD ELCTSVLDS
Sbjct: 155 LDDELISLDYPRTPEELAVAGRVKDAMRQQCVPQIVRAWYDIVSMYRNSDHELCTSVLDS 214

Query: 542 MRRYISWIDIGLIVNDAFVPLLFDLILVGTPSDQLRGAAVRCLLAVVSKRMEPXXXXXXX 721
           MRRYISWIDIGLIVNDAF+PLLFDLILVG  SDQLRGA+VRCLLAVVSKRMEP       
Sbjct: 215 MRRYISWIDIGLIVNDAFIPLLFDLILVGPLSDQLRGASVRCLLAVVSKRMEPESKLSLL 274

Query: 722 XXXXXXRVFRLVTQDGDAELVSE 790
                 RV RLVT+D D ELVS+
Sbjct: 275 QSLQISRVLRLVTEDVDVELVSD 297


>ref|XP_002521319.1| Exportin-T, putative [Ricinus communis] gi|223539397|gb|EEF40987.1|
           Exportin-T, putative [Ricinus communis]
          Length = 988

 Score =  385 bits (988), Expect = e-105
 Identities = 193/263 (73%), Positives = 220/263 (83%), Gaps = 3/263 (1%)
 Frame = +2

Query: 11  SICRLCVEKLCFSNLVQVQFWCLQTLHEVIQTRYSTMTPDEKHMIRGSVFSIVCFE---D 181
           SICR+C+EKL F  LVQVQFWCLQTLHEVI+ +Y+ ++ +EK  IR SVFS+ CF+   D
Sbjct: 38  SICRICIEKLYFCKLVQVQFWCLQTLHEVIKVKYALLSLEEKDFIRKSVFSMCCFDVIDD 97

Query: 182 KNLIRVLEGPAFIKNKLAQVLITLIYFEYPLIWSSVFVDFLPHLSKGNIVIDMFCRVLNA 361
            N +R LEGPAFIKNKLAQVL+TLIYFEYPL+WSSV VDFLPHLSKG IVIDMFCRVLNA
Sbjct: 98  GNAVRFLEGPAFIKNKLAQVLVTLIYFEYPLVWSSVIVDFLPHLSKGAIVIDMFCRVLNA 157

Query: 362 LDDELISLDYHRTPEELTVAGRVKDAMRQQCVPQIVRAWYDIVSMYRNSDQELCTSVLDS 541
           LDDELISLDY RT EELTVAGRVKDAMRQQCV QIVRAWYDI+SMYRNSD E+C++VLDS
Sbjct: 158 LDDELISLDYPRTLEELTVAGRVKDAMRQQCVGQIVRAWYDIISMYRNSDPEVCSNVLDS 217

Query: 542 MRRYISWIDIGLIVNDAFVPLLFDLILVGTPSDQLRGAAVRCLLAVVSKRMEPXXXXXXX 721
           MRRYISW+DIGLIVNDAF+PLLF+LILV   S+QL+GAA  C+LAVVSKRM+P       
Sbjct: 218 MRRYISWVDIGLIVNDAFIPLLFELILVYGESEQLQGAAAGCILAVVSKRMDPQSKLTIL 277

Query: 722 XXXXXXRVFRLVTQDGDAELVSE 790
                 RVF LVT D ++ELVS+
Sbjct: 278 KSLQISRVFALVTGDSESELVSK 300


>ref|XP_002304132.1| predicted protein [Populus trichocarpa] gi|222841564|gb|EEE79111.1|
           predicted protein [Populus trichocarpa]
          Length = 994

 Score =  377 bits (967), Expect = e-102
 Identities = 187/269 (69%), Positives = 220/269 (81%), Gaps = 6/269 (2%)
 Frame = +2

Query: 2   EKPSICRLCVEKLCFSNLVQVQFWCLQTLHEVIQTRYSTMTPDEKHMIRGSVFSIVCFE- 178
           E P++CR+C+EKLCF NLVQVQFWCLQTLHEVI+ +Y+ ++ +EK  IR SVFS+ CFE 
Sbjct: 35  ETPTVCRICIEKLCFCNLVQVQFWCLQTLHEVIRVKYAMLSLEEKDFIRKSVFSMCCFEV 94

Query: 179 ----DKNLIRVLEG-PAFIKNKLAQVLITLIYFEYPLIWSSVFVDFLPHLSKGNIVIDMF 343
               + N +R+LEG PAFIKNKLAQV +TL+YF+YPLIWSSVFVDFLPHL KG +VIDMF
Sbjct: 95  IDDKNNNAVRILEGAPAFIKNKLAQVFVTLVYFDYPLIWSSVFVDFLPHLRKGAVVIDMF 154

Query: 344 CRVLNALDDELISLDYHRTPEELTVAGRVKDAMRQQCVPQIVRAWYDIVSMYRNSDQELC 523
           CR+LNALDDELISLDY RTPEE+ VAGRVKDA+RQQC+ QIV  WY+IVSMYRNSD +LC
Sbjct: 155 CRILNALDDELISLDYPRTPEEMGVAGRVKDAIRQQCIAQIVNVWYEIVSMYRNSDLDLC 214

Query: 524 TSVLDSMRRYISWIDIGLIVNDAFVPLLFDLILVGTPSDQLRGAAVRCLLAVVSKRMEPX 703
           +SVL+SMRRYISWIDIGLIVNDAF+PLLF LILV   S+QL+GAA  C+LAVVSKRM+  
Sbjct: 215 SSVLESMRRYISWIDIGLIVNDAFIPLLFQLILVSGGSEQLQGAAAGCVLAVVSKRMDHQ 274

Query: 704 XXXXXXXXXXXXRVFRLVTQDGDAELVSE 790
                       RVF LVT D D+ELVS+
Sbjct: 275 SKLAILQNLQINRVFGLVTGDIDSELVSK 303


>ref|XP_002273606.1| PREDICTED: exportin-T [Vitis vinifera] gi|297742994|emb|CBI35861.3|
           unnamed protein product [Vitis vinifera]
          Length = 992

 Score =  375 bits (962), Expect = e-102
 Identities = 189/269 (70%), Positives = 217/269 (80%), Gaps = 6/269 (2%)
 Frame = +2

Query: 2   EKPSICRLCVEKLCFSNLVQVQFWCLQTLHEVIQTRYSTMTPDEKHMIRGSVFSIVCFE- 178
           E P IC +CVE+LCFS LVQVQFWCLQ LH+VI+ RYS+M+ DEK  +R SVFS+ CFE 
Sbjct: 35  ESPLICSICVERLCFSKLVQVQFWCLQCLHDVIRVRYSSMSLDEKGFVRKSVFSMACFER 94

Query: 179 -----DKNLIRVLEGPAFIKNKLAQVLITLIYFEYPLIWSSVFVDFLPHLSKGNIVIDMF 343
                D++ +RVLEGP FIKNKLAQVL+TLIYFEYPLIWSSVFVD+LPHL KG  VIDMF
Sbjct: 95  LEGVDDESSVRVLEGPPFIKNKLAQVLVTLIYFEYPLIWSSVFVDYLPHLGKGAPVIDMF 154

Query: 344 CRVLNALDDELISLDYHRTPEELTVAGRVKDAMRQQCVPQIVRAWYDIVSMYRNSDQELC 523
           CR+LNALDDELISLDY RT +EL VA RVKDAMRQQCV QIVRAWY+IVS+YRNSD +LC
Sbjct: 155 CRILNALDDELISLDYTRTQDELVVATRVKDAMRQQCVAQIVRAWYNIVSLYRNSDPDLC 214

Query: 524 TSVLDSMRRYISWIDIGLIVNDAFVPLLFDLILVGTPSDQLRGAAVRCLLAVVSKRMEPX 703
           +SVLDSMRRYISWIDIGLIVNDAF+PLLF+LILV    +QLRG+A  C+LAVVSKRM+  
Sbjct: 215 SSVLDSMRRYISWIDIGLIVNDAFIPLLFELILVKGLPEQLRGSAAGCVLAVVSKRMDLQ 274

Query: 704 XXXXXXXXXXXXRVFRLVTQDGDAELVSE 790
                       RVF LV +D D+EL S+
Sbjct: 275 AKLSLLQNLKISRVFGLVAEDSDSELASK 303


Top