BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019476
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603800.1| DNA topoisomerase I [Medicago truncatula] gi...   139   5e-31
ref|XP_003603793.1| DNA topoisomerase I [Medicago truncatula] gi...   137   1e-30
ref|XP_003603785.1| DNA topoisomerase I [Medicago truncatula] gi...   135   7e-30
emb|CAA74890.1| topoisomerase I [Pisum sativum]                       119   3e-25
ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis...   105   4e-21

>ref|XP_003603800.1| DNA topoisomerase I [Medicago truncatula]
           gi|355492848|gb|AES74051.1| DNA topoisomerase I
           [Medicago truncatula]
          Length = 921

 Score =  139 bits (349), Expect = 5e-31
 Identities = 83/143 (58%), Positives = 90/143 (62%), Gaps = 3/143 (2%)
 Frame = -2

Query: 420 SVKQERPSSTLSVKRPLDKIDSLHSLGKKTKLSGPVSSINTKQILKPEPKV---EDDDDI 250
           S KQE  +S LSVKRPLDKIDSLHS GKK+KLS P SSIN KQ    + K    E+DDDI
Sbjct: 175 SNKQEM-TSMLSVKRPLDKIDSLHSSGKKSKLSDPASSINAKQTTMKDAKAEEEEEDDDI 233

Query: 249 PISQRMKKSAILADKSSSLKKLTNVTKVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPS 70
           PIS+R  K   L +KSSSLKKLTNVTKVN                              S
Sbjct: 234 PISRRRNK---LVNKSSSLKKLTNVTKVNKGAAPSFKKKSKLKKSGNKSKHVKSTKLQSS 290

Query: 69  SGDGQKKWTTLVHNGVIFPPPYQ 1
           SGDGQKKWTTLVHNGVIFPPPY+
Sbjct: 291 SGDGQKKWTTLVHNGVIFPPPYK 313


>ref|XP_003603793.1| DNA topoisomerase I [Medicago truncatula]
           gi|355492841|gb|AES74044.1| DNA topoisomerase I
           [Medicago truncatula]
          Length = 1009

 Score =  137 bits (346), Expect = 1e-30
 Identities = 95/199 (47%), Positives = 111/199 (55%), Gaps = 10/199 (5%)
 Frame = -2

Query: 567 SSIKQERPSTLSVKRPLDKIDSLHSLGNDSDQKKPIS-KVQKGQQDGSS-----SSVKQE 406
           SSIK +  +    K   D +   +   +D D   P+S ++ K    G S      S KQE
Sbjct: 122 SSIKMKMNNGNVKKATPDVLKKSYEDSDDDDDDIPLSARLPKNTNLGKSRCNFDDSNKQE 181

Query: 405 RPSSTLSVKRPLDKIDSLHSLGKKTKLSGPVSSINTKQ-ILKPEPKVED---DDDIPISQ 238
             +S LS KR LDKIDSLHS GKK+KLS P SSIN KQ  +K + K E+   DDDIPIS+
Sbjct: 182 M-TSMLSAKRSLDKIDSLHSSGKKSKLSDPASSINAKQKTMKCDAKAEEEEEDDDIPISR 240

Query: 237 RMKKSAILADKSSSLKKLTNVTKVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPSSGDG 58
           R  K   L +KSSSLKKLTNVTKVN                              SSGDG
Sbjct: 241 RRNK---LVNKSSSLKKLTNVTKVNKGAAPSFKKKSKLKKSGNKSKHVKSTKLQSSSGDG 297

Query: 57  QKKWTTLVHNGVIFPPPYQ 1
           QKKWTTLVHNGVIFPPPY+
Sbjct: 298 QKKWTTLVHNGVIFPPPYK 316


>ref|XP_003603785.1| DNA topoisomerase I [Medicago truncatula]
           gi|355492833|gb|AES74036.1| DNA topoisomerase I
           [Medicago truncatula]
          Length = 789

 Score =  135 bits (339), Expect = 7e-30
 Identities = 91/199 (45%), Positives = 113/199 (56%), Gaps = 4/199 (2%)
 Frame = -2

Query: 585 QQDGSSSSIKQERPSTLSVKRPLDKIDSLHSLGNDSDQKKPISKVQKGQQDGSSSSVKQE 406
           ++D    S+ + + +  +VK+    +  L     D D   P+S  +  Q      S KQE
Sbjct: 108 EEDSMPLSVIRMKMNNANVKKATPNV--LKKSYEDFDDDIPLS-ARLSQITNYDDSDKQE 164

Query: 405 RPSSTLSVKRPLDKIDSLHSLGKKTKLSGPVSSINTKQ-ILKPEPKV---EDDDDIPISQ 238
           + +STLSVKRPLD+ +SLHS GKK+KLS P SSIN KQ  +K + K    E+DDDIPIS+
Sbjct: 165 K-ASTLSVKRPLDEFESLHSSGKKSKLSHPASSINAKQTTMKCDVKAEEEEEDDDIPISR 223

Query: 237 RMKKSAILADKSSSLKKLTNVTKVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPSSGDG 58
           RM K   LA+KSS  KKLTN TKVN                              SSGDG
Sbjct: 224 RMNK---LANKSSYSKKLTNDTKVNKVDAPSFKKKARLKKSGNKSKHVKSTKHQLSSGDG 280

Query: 57  QKKWTTLVHNGVIFPPPYQ 1
           QKKWTTLVHNGVIFPPPY+
Sbjct: 281 QKKWTTLVHNGVIFPPPYK 299


>emb|CAA74890.1| topoisomerase I [Pisum sativum]
          Length = 892

 Score =  119 bits (299), Expect = 3e-25
 Identities = 85/206 (41%), Positives = 105/206 (50%), Gaps = 9/206 (4%)
 Frame = -2

Query: 591 KGQQDGSSSSIKQERPSTLSVKRPLDKIDSLHSLGNDSDQKKPISKVQKGQQDGSSSSVK 412
           K  QD  S        + LS K   +      S+  D   KKPISKVQK +Q+GS++S K
Sbjct: 156 KSSQDSDSDDDVVPLSANLSAKLIRNSNSGTSSMNYDDTDKKPISKVQKKRQNGSTTSNK 215

Query: 411 QERPSSTLSVKRPLDKIDSLHSLGKKTKLSGPVSSINTKQI-LKPEPKVE------DDDD 253
           Q++  STL +KR L   DS HS  KK+K+S   +SI TK + +K E K E      DDD+
Sbjct: 216 QQK-LSTLPIKRELGNCDSPHSSAKKSKISDSTTSIKTKHVSVKCEIKAEEEDDDDDDDE 274

Query: 252 IPISQRMKKSAILADKSSSLKK-LTNVTKVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 76
           +PIS R KKS  L+DK SS KK L  VTKVN                             
Sbjct: 275 LPISHRFKKSPTLSDKPSSTKKILAKVTKVNNSGTTSFKKQTKNKSKNPSVAQNIPNLRN 334

Query: 75  PSSGDGQ-KKWTTLVHNGVIFPPPYQ 1
                   +KWTTLVHNGVIFPPPY+
Sbjct: 335 FFLALVMGRKWTTLVHNGVIFPPPYK 360


>ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis sativus]
           gi|449503189|ref|XP_004161878.1| PREDICTED: DNA
           topoisomerase 1-like [Cucumis sativus]
          Length = 889

 Score =  105 bits (263), Expect = 4e-21
 Identities = 77/165 (46%), Positives = 96/165 (58%), Gaps = 6/165 (3%)
 Frame = -2

Query: 477 DQKKPISKVQKGQQDGSSSSVKQERPSSTLSVKRPLDKIDSLHSLG----KKTKLSGPVS 310
           D+KKP+  V K  Q+GS+S  K ++P+  LS KRPL   DS HS      KK KL+   S
Sbjct: 206 DEKKPL--VPKVHQNGSTSRDKLQKPA-VLSSKRPLPNEDS-HSPSQFPTKKPKLTDSSS 261

Query: 309 SINTKQI-LKPEPKVEDDDD-IPISQRMKKSAILADKSSSLKKLTNVTKVNXXXXXXXXX 136
            +N+K + LK + +V+DDDD IPISQRMKK +   +KSSS K    ++KV          
Sbjct: 262 PLNSKLVSLKAKQEVDDDDDDIPISQRMKKVSATVNKSSSSK--PTISKV--VSSSIKKT 317

Query: 135 XXXXXXXXXXXXXXXXXXXLPSSGDGQKKWTTLVHNGVIFPPPYQ 1
                              LPS+GDGQKKWTTLVHNGVIFPPPYQ
Sbjct: 318 FKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPPYQ 362