BLASTX nr result

ID: Glycyrrhiza23_contig00019469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019469
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514634.1| conserved hypothetical protein [Ricinus comm...   113   3e-23
ref|XP_002265430.1| PREDICTED: uncharacterized protein LOC100256...   110   2e-22
ref|XP_003522285.1| PREDICTED: uncharacterized protein LOC100783...   106   2e-21
ref|XP_002324772.1| predicted protein [Populus trichocarpa] gi|2...   100   3e-19
ref|NP_565080.1| Mitochondrial transcription termination factor ...    85   1e-14

>ref|XP_002514634.1| conserved hypothetical protein [Ricinus communis]
           gi|223546238|gb|EEF47740.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 450

 Score =  113 bits (282), Expect = 3e-23
 Identities = 57/108 (52%), Positives = 76/108 (70%)
 Frame = -1

Query: 325 YRKQISLANLFNSYGFPSSHLHSFLSQNRFLLDSDPSELQKSLATLFSFRIPQNTLVSLI 146
           YRK ISLAN+F  YGFP S LHSF+S N FLL+S+  +++KSL  L SF+IPQ  LVSLI
Sbjct: 44  YRKHISLANIFQRYGFPPSQLHSFISANHFLLNSNLHDIEKSLGILLSFKIPQKVLVSLI 103

Query: 145 RDCPGVLEPRFLHNWETGFPELKSRVPNLSPLVLANLLQCSRRFLLDP 2
            +CP +L+  FL  W+  F   K R  ++SPLV+ ++L  S+RF +DP
Sbjct: 104 TECPSILDFEFLKTWKICFS--KYRDLSISPLVIKSVLAHSKRFQIDP 149


>ref|XP_002265430.1| PREDICTED: uncharacterized protein LOC100256963 [Vitis vinifera]
           gi|297734077|emb|CBI15324.3| unnamed protein product
           [Vitis vinifera]
          Length = 451

 Score =  110 bits (275), Expect = 2e-22
 Identities = 58/117 (49%), Positives = 78/117 (66%)
 Frame = -1

Query: 352 TKQSSSSNLYRKQISLANLFNSYGFPSSHLHSFLSQNRFLLDSDPSELQKSLATLFSFRI 173
           ++  S  + +RKQISL NLF  +GFP S LH FL +N+   + +  EL+KSL  LFSF+I
Sbjct: 37  SRNISPQSPFRKQISLFNLFQRHGFPPSQLHGFLKKNQIFQNYNLLELEKSLGILFSFQI 96

Query: 172 PQNTLVSLIRDCPGVLEPRFLHNWETGFPELKSRVPNLSPLVLANLLQCSRRFLLDP 2
           PQ  ++SLI DCP +LE  FL  WE G  +L   V  +SPL++ N+L+ SRRF LDP
Sbjct: 97  PQKFILSLISDCPRLLEFEFLKKWEMGIAKL--GVSGVSPLMIRNVLEFSRRFELDP 151


>ref|XP_003522285.1| PREDICTED: uncharacterized protein LOC100783135 [Glycine max]
          Length = 372

 Score =  106 bits (265), Expect = 2e-21
 Identities = 58/114 (50%), Positives = 80/114 (70%), Gaps = 2/114 (1%)
 Frame = -1

Query: 337 SSNLYRKQISLANLFNSYGFPSSHLHSFLSQNRFLLDSDPSELQKSLATL-FSFRIPQNT 161
           S + YRKQI+LA LF  +GFPSS + S LS+N  LL +   +L+ SL+TL FS R+PQN 
Sbjct: 18  SQSHYRKQIALATLFQKHGFPSSLVPSLLSRNPSLLRTPLPDLRHSLSTLLFSLRLPQNA 77

Query: 160 LVSLIRDCPGVL-EPRFLHNWETGFPELKSRVPNLSPLVLANLLQCSRRFLLDP 2
           +VSL+   P +L +P FL  +++ FPE++SR P +SP  L NLL CSR+F L+P
Sbjct: 78  VVSLLTSSPSLLLDPTFLKTFQSHFPEIQSRFPKISPSTLVNLLLCSRKFDLNP 131


>ref|XP_002324772.1| predicted protein [Populus trichocarpa] gi|222866206|gb|EEF03337.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 53/113 (46%), Positives = 75/113 (66%), Gaps = 1/113 (0%)
 Frame = -1

Query: 337 SSNLYRKQISLANLFNSYGFPSSHLHSFLSQNRFLLDSDPSELQKSLATL-FSFRIPQNT 161
           + +LYRKQISL+ L   YGFP S L +FLS+N FLL+S+  + +KSL  L  SF+IP  +
Sbjct: 1   NQSLYRKQISLSTLLQRYGFPPSQLQTFLSRNHFLLNSNLHDTEKSLGMLTSSFKIPHKS 60

Query: 160 LVSLIRDCPGVLEPRFLHNWETGFPELKSRVPNLSPLVLANLLQCSRRFLLDP 2
           +VSLI DCPGVL+  FL  WE G  +       + PL++  +L+ S++F +DP
Sbjct: 61  VVSLIIDCPGVLDFDFLKRWEFGLSKFADL--GVPPLLIKTVLEHSKKFQIDP 111


>ref|NP_565080.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana]
           gi|12323819|gb|AAG51878.1|AC079678_8 unknown protein;
           33994-35331 [Arabidopsis thaliana]
           gi|332197431|gb|AEE35552.1| Mitochondrial transcription
           termination factor family protein [Arabidopsis thaliana]
          Length = 445

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 43/75 (57%), Positives = 49/75 (65%)
 Frame = -1

Query: 325 YRKQISLANLFNSYGFPSSHLHSFLSQNRFLLDSDPSELQKSLATLFSFRIPQNTLVSLI 146
           YRK+I LANL   YGFP S L  FLS+N  LL+SD  E + SL  L S +IPQ +LVSLI
Sbjct: 38  YRKRILLANLLQRYGFPPSSLQHFLSRNNHLLNSDLVETEISLGILLSLKIPQKSLVSLI 97

Query: 145 RDCPGVLEPRFLHNW 101
            DCP VL   FL  W
Sbjct: 98  SDCPNVLRSEFLRKW 112