BLASTX nr result

ID: Glycyrrhiza23_contig00019465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019465
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531779.1| PREDICTED: protein brittle-1, chloroplastic/...   139   2e-31
ref|NP_001241139.1| uncharacterized protein LOC100795558 [Glycin...   134   8e-30
ref|XP_002311894.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28
gb|ABK96044.1| unknown [Populus trichocarpa]                          128   4e-28
ref|XP_002266396.1| PREDICTED: protein brittle-1, chloroplastic/...   128   4e-28

>ref|XP_003531779.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic-like
           [Glycine max]
          Length = 380

 Score =  139 bits (351), Expect = 2e-31
 Identities = 75/102 (73%), Positives = 86/102 (84%), Gaps = 1/102 (0%)
 Frame = +3

Query: 186 GMFRDVYSIIEDNTEIDQPLPNNSHLRFQMPHLA-RDFLDSREVREFFSGALAGAMTKAI 362
           G+F DVYSII++  EID    NNS   FQ P +  ++FL SREVREF SGAL+GAMTKAI
Sbjct: 42  GVFGDVYSIIKE-MEIDHH--NNSTFDFQFPPITFQNFLGSREVREFISGALSGAMTKAI 98

Query: 363 LAPLETIRTRMVVGVGSRNISGSFIQVVEQQGWQGLWAGNMI 488
           LAPLETIRTRMVVGVGS+NI+GSFI+V+EQQGWQGLWAGNMI
Sbjct: 99  LAPLETIRTRMVVGVGSKNIAGSFIEVIEQQGWQGLWAGNMI 140


>ref|NP_001241139.1| uncharacterized protein LOC100795558 [Glycine max]
           gi|255648051|gb|ACU24481.1| unknown [Glycine max]
          Length = 381

 Score =  134 bits (337), Expect = 8e-30
 Identities = 73/102 (71%), Positives = 84/102 (82%), Gaps = 1/102 (0%)
 Frame = +3

Query: 186 GMFRDVYSIIEDNTEIDQPLPNNSHLRFQMPHLA-RDFLDSREVREFFSGALAGAMTKAI 362
           G+F DV SII++  EID P  +    +FQ P +A ++FL SREVREF SGALAGAM KAI
Sbjct: 42  GVFGDVSSIIKE-MEIDHP-NSTFDFQFQFPPIAFQNFLGSREVREFISGALAGAMAKAI 99

Query: 363 LAPLETIRTRMVVGVGSRNISGSFIQVVEQQGWQGLWAGNMI 488
           LAPLETIRTRMVVGVGS+NI+GSFI V+EQQGWQGLWAGNMI
Sbjct: 100 LAPLETIRTRMVVGVGSKNIAGSFIDVIEQQGWQGLWAGNMI 141


>ref|XP_002311894.1| predicted protein [Populus trichocarpa] gi|222851714|gb|EEE89261.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  128 bits (322), Expect = 4e-28
 Identities = 67/98 (68%), Positives = 77/98 (78%), Gaps = 11/98 (11%)
 Frame = +3

Query: 228 EIDQPLPNNS--------HLRFQMPHL---ARDFLDSREVREFFSGALAGAMTKAILAPL 374
           E+D+P+P  S         LRFQ+P L    RDF+ SRE  EF SGALAGAMTKA+LAPL
Sbjct: 6   ELDEPIPLPSPPTLAVPFELRFQLPDLKLAVRDFMRSREAGEFLSGALAGAMTKAVLAPL 65

Query: 375 ETIRTRMVVGVGSRNISGSFIQVVEQQGWQGLWAGNMI 488
           ETIRTRMVVGVGS+NISGSF++V+EQQGWQGLWAGN I
Sbjct: 66  ETIRTRMVVGVGSKNISGSFLEVIEQQGWQGLWAGNGI 103


>gb|ABK96044.1| unknown [Populus trichocarpa]
          Length = 365

 Score =  128 bits (322), Expect = 4e-28
 Identities = 67/98 (68%), Positives = 77/98 (78%), Gaps = 11/98 (11%)
 Frame = +3

Query: 228 EIDQPLPNNS--------HLRFQMPHL---ARDFLDSREVREFFSGALAGAMTKAILAPL 374
           E+D+P+P  S         LRFQ+P L    RDF+ SRE  EF SGALAGAMTKA+LAPL
Sbjct: 29  ELDEPIPLPSPPTLAVPFELRFQLPDLKLAVRDFMRSREAGEFLSGALAGAMTKAVLAPL 88

Query: 375 ETIRTRMVVGVGSRNISGSFIQVVEQQGWQGLWAGNMI 488
           ETIRTRMVVGVGS+NISGSF++V+EQQGWQGLWAGN I
Sbjct: 89  ETIRTRMVVGVGSKNISGSFLEVIEQQGWQGLWAGNGI 126


>ref|XP_002266396.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic isoform 1
           [Vitis vinifera] gi|297735760|emb|CBI18447.3| unnamed
           protein product [Vitis vinifera]
          Length = 356

 Score =  128 bits (322), Expect = 4e-28
 Identities = 69/112 (61%), Positives = 82/112 (73%), Gaps = 11/112 (9%)
 Frame = +3

Query: 186 GMFRDVYSI--------IEDNTEIDQPLPNNSHLRFQMPHLAR---DFLDSREVREFFSG 332
           G+F DVY +        IE +  IDQ        RFQ+P L +   DF+ +REV EF SG
Sbjct: 13  GVFGDVYGVMMVPKELEIEKDASIDQ-------FRFQLPDLKQAFQDFMRTREVGEFISG 65

Query: 333 ALAGAMTKAILAPLETIRTRMVVGVGSRNISGSFIQVVEQQGWQGLWAGNMI 488
           ALAGAMTKA+LAPLETIRTRMVVG+GS+NISGSF++V+EQQGWQGLWAGN I
Sbjct: 66  ALAGAMTKAVLAPLETIRTRMVVGIGSKNISGSFLEVIEQQGWQGLWAGNTI 117


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