BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019449
         (1090 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549390.1| PREDICTED: pentatricopeptide repeat-containi...   424   e-116
ref|XP_003545320.1| PREDICTED: pentatricopeptide repeat-containi...   406   e-111
ref|XP_003597701.1| Pentatricopeptide repeat-containing protein ...   400   e-109
ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containi...   346   5e-93
ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containi...   342   7e-92

>ref|XP_003549390.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
            mitochondrial-like [Glycine max]
          Length = 550

 Score =  424 bits (1091), Expect = e-116
 Identities = 231/363 (63%), Positives = 257/363 (70%), Gaps = 1/363 (0%)
 Frame = +1

Query: 4    FSALTQSNCRRPFLSWSWDCYTVKHAISDATT-GXXXXXXXXXXXXXXXXINIKLSSKGR 180
            FS  TQS+  RP LS     +  KHA++ AT                     IKLSSK R
Sbjct: 9    FSIFTQSHYWRPLLS----SHNAKHALTAATNFSITSLARTPKSRDEGTTTTIKLSSKSR 64

Query: 181  RKAAHESPEAVLHRKLNQCSKAGDVVQALDLYDEARKMGFLLSPKHYNKLLYLCSIVQTD 360
            RKA +ESPE VL RKLN+CSK GDV+QAL  YDEARK+G LLS  HYNKLLYLCS+   +
Sbjct: 65   RKAFYESPEGVLLRKLNECSKDGDVIQALRHYDEARKLGVLLSLDHYNKLLYLCSV---E 121

Query: 361  DATVLSRLGLERGFEIFQQMLNDQVKPNEXXXXXXXXXXXXKEDPEMAFELLKQMKSAGI 540
             A  +  LGL+RGFEIFQQMLND+V+PNE            KEDP+MAFELLKQMK+  I
Sbjct: 122  SAAGVPHLGLKRGFEIFQQMLNDRVQPNEATFTNAARLAAAKEDPDMAFELLKQMKNVAI 181

Query: 541  APKLRSYAPALYGFCKRGDAEKAYQVDADMIESGVMAEEPELSALLEVSVGAKNEDKVYE 720
            APKLRSY PAL+GFCKRGDAEKAY VDADM+ESG++AEEPELSALLEVSV A  EDKVYE
Sbjct: 182  APKLRSYEPALFGFCKRGDAEKAYLVDADMVESGIVAEEPELSALLEVSVNANKEDKVYE 241

Query: 721  MLRRLRAAVRQVSESTLRIIEDWFGSEYAASIGKGSWDADKVREGIVXXXXXXXXXXXXX 900
            +L RLRA +RQVSESTL I+E+WF SEYAA IGK  WD  KVREGI              
Sbjct: 242  VLHRLRATLRQVSESTLGIVENWFNSEYAAKIGKEKWDVKKVREGIARGGGGWHGQGWLG 301

Query: 901  XXXXKVDKTHVNEDGMCLSCGEKLVSIDIDPKETENFAASLSKLACQREVKANFNHFQKR 1080
                KV  T VNEDG+CLSCGEKL SIDIDPKETENFAASLSKLACQ+E KANF HFQ  
Sbjct: 302  SGRWKVVNTQVNEDGVCLSCGEKLASIDIDPKETENFAASLSKLACQKEAKANFVHFQTW 361

Query: 1081 LER 1089
            LER
Sbjct: 362  LER 364


>ref|XP_003545320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
            mitochondrial-like [Glycine max]
          Length = 559

 Score =  406 bits (1044), Expect = e-111
 Identities = 223/363 (61%), Positives = 251/363 (69%), Gaps = 1/363 (0%)
 Frame = +1

Query: 4    FSALTQSNCRRPFLSWSWDCYTVKHAISDATTGXXXXXXXXXXXXXXXXINI-KLSSKGR 180
            FS   QS+  RP LS     +  K  ++ AT                    I KLSSK R
Sbjct: 8    FSIFRQSHYWRPLLS----SHNAKRTLTAATNFSITSLARTPKSRDEGTTTIVKLSSKAR 63

Query: 181  RKAAHESPEAVLHRKLNQCSKAGDVVQALDLYDEARKMGFLLSPKHYNKLLYLCSIVQTD 360
            RKA +ESPE VL RKLN+CSK G+V QAL  YDEARK+G LL+  HYNKLLYLCSI   +
Sbjct: 64   RKAFYESPEGVLLRKLNECSKDGNVAQALCHYDEARKLGVLLNLDHYNKLLYLCSI---E 120

Query: 361  DATVLSRLGLERGFEIFQQMLNDQVKPNEXXXXXXXXXXXXKEDPEMAFELLKQMKSAGI 540
             A     LGL+RGFE+FQQMLND+V+PNE             EDP+MAFELLKQMK+  I
Sbjct: 121  SAAGFPNLGLKRGFEVFQQMLNDRVQPNEATFTNAARLAAANEDPDMAFELLKQMKNVAI 180

Query: 541  APKLRSYAPALYGFCKRGDAEKAYQVDADMIESGVMAEEPELSALLEVSVGAKNEDKVYE 720
            APKLRSY PAL+GFCKRGDAEKAY VDADM+ESG++AEEPELSALLEVSV AK EDKVY+
Sbjct: 181  APKLRSYEPALFGFCKRGDAEKAYLVDADMVESGIVAEEPELSALLEVSVNAKKEDKVYD 240

Query: 721  MLRRLRAAVRQVSESTLRIIEDWFGSEYAASIGKGSWDADKVREGIVXXXXXXXXXXXXX 900
            +L RLR+ +RQVSESTL I+EDWF SEYAA IGK  WD  KVREGI              
Sbjct: 241  ILHRLRSTLRQVSESTLGIVEDWFNSEYAAKIGKEKWDVKKVREGIAQGGGGWHGQGWLG 300

Query: 901  XXXXKVDKTHVNEDGMCLSCGEKLVSIDIDPKETENFAASLSKLACQREVKANFNHFQKR 1080
                KV  T VNEDG+C  CGEKLVSIDIDPKETENFAASLSKLACQ+E KANF HFQ  
Sbjct: 301  SGRWKVANTQVNEDGVCPLCGEKLVSIDIDPKETENFAASLSKLACQKEAKANFVHFQTW 360

Query: 1081 LER 1089
            LE+
Sbjct: 361  LEQ 363


>ref|XP_003597701.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355486749|gb|AES67952.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 558

 Score =  400 bits (1027), Expect = e-109
 Identities = 223/371 (60%), Positives = 252/371 (67%), Gaps = 8/371 (2%)
 Frame = +1

Query: 1    LFSALTQSNCRRPFLSWSWDCYTVKHAISDATTGXXXXXXXXXXXXXXXXIN-------- 156
            LFS LT     RPFLS     +++KH  + AT                   N        
Sbjct: 14   LFSILTH----RPFLS----SFSLKHTFNRATLPFTTTTINNTLSQTPTSQNNTESTTHP 65

Query: 157  IKLSSKGRRKAAHESPEAVLHRKLNQCSKAGDVVQALDLYDEARKMGFLLSPKHYNKLLY 336
            IKLS+K RRKAA ESP  +L +KLN CSK  DV+QAL+LYDEARK    L+  HYNKLLY
Sbjct: 66   IKLSTKARRKAAQESPVGILQKKLNNCSKTSDVLQALNLYDEARKAHVPLNLDHYNKLLY 125

Query: 337  LCSIVQTDDATVLSRLGLERGFEIFQQMLNDQVKPNEXXXXXXXXXXXXKEDPEMAFELL 516
            LC++   D +     LGL+RGFEIF+QML D V+PNE            KEDPEMAFELL
Sbjct: 126  LCTVQNGDGS--FFHLGLQRGFEIFEQMLRDNVEPNEATFTNAARLAAAKEDPEMAFELL 183

Query: 517  KQMKSAGIAPKLRSYAPALYGFCKRGDAEKAYQVDADMIESGVMAEEPELSALLEVSVGA 696
            KQMK  GIAPKLRSY PALYGFC RGDA KAY+VD DMIESGVMAEE EL ALLEVSV  
Sbjct: 184  KQMKRVGIAPKLRSYGPALYGFCARGDAMKAYEVDDDMIESGVMAEEDELCALLEVSVEV 243

Query: 697  KNEDKVYEMLRRLRAAVRQVSESTLRIIEDWFGSEYAASIGKGSWDADKVREGIVXXXXX 876
            KNEDKVYE+L RLRA VRQVSESTL++IEDWF SEYA  IGK  WD +++REG V     
Sbjct: 244  KNEDKVYEILHRLRAVVRQVSESTLKVIEDWFESEYAMKIGKREWDDEEIREGFVRGGGG 303

Query: 877  XXXXXXXXXXXXKVDKTHVNEDGMCLSCGEKLVSIDIDPKETENFAASLSKLACQREVKA 1056
                        KV KT+V+EDGMCLSC EKLVSIDIDPKETENFAASLSKLA +++ KA
Sbjct: 304  WHGQGWLGSGEWKVVKTNVDEDGMCLSCSEKLVSIDIDPKETENFAASLSKLAHEKQPKA 363

Query: 1057 NFNHFQKRLER 1089
            NFNHFQK LE+
Sbjct: 364  NFNHFQKWLEK 374


>ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
            mitochondrial-like [Vitis vinifera]
          Length = 526

 Score =  346 bits (888), Expect = 5e-93
 Identities = 179/309 (57%), Positives = 221/309 (71%)
 Frame = +1

Query: 163  LSSKGRRKAAHESPEAVLHRKLNQCSKAGDVVQALDLYDEARKMGFLLSPKHYNKLLYLC 342
            +S+K R+KA  ESPE VL  KL+ CSK GDVV+AL LYDEAR  G  LS  HYN LLYLC
Sbjct: 29   MSNKARKKARRESPEGVLRFKLDMCSKRGDVVEALRLYDEARSRGVPLSQHHYNVLLYLC 88

Query: 343  SIVQTDDATVLSRLGLERGFEIFQQMLNDQVKPNEXXXXXXXXXXXXKEDPEMAFELLKQ 522
            S   ++    +  L L+RGFEIF+QM  D ++PNE             EDPEMAF L+KQ
Sbjct: 89   SCSGSNGDENVVNLALKRGFEIFKQMGVDGIEPNEATFTSAARLACAMEDPEMAFNLVKQ 148

Query: 523  MKSAGIAPKLRSYAPALYGFCKRGDAEKAYQVDADMIESGVMAEEPELSALLEVSVGAKN 702
            MKS GI PKLRSY P L+GFCK+GDA++AY+VDA M+ESGV+AEEPEL ALL +SV ++ 
Sbjct: 149  MKSCGIPPKLRSYGPPLFGFCKKGDADRAYEVDAHMMESGVVAEEPELCALLGLSVESRR 208

Query: 703  EDKVYEMLRRLRAAVRQVSESTLRIIEDWFGSEYAASIGKGSWDADKVREGIVXXXXXXX 882
             D+VYEM+ RLRA+VRQVSEST  ++E WF SE AA +G+ +WD  KVREG+V       
Sbjct: 209  VDRVYEMVHRLRASVRQVSESTAEVVERWFNSEDAAGVGEENWDVGKVREGVVKGGGGWH 268

Query: 883  XXXXXXXXXXKVDKTHVNEDGMCLSCGEKLVSIDIDPKETENFAASLSKLACQREVKANF 1062
                      KV +T ++E G+C SCGEKLV IDIDP+ETENFA+SL+KLACQREVKA+F
Sbjct: 269  GQGWLGKGKWKVVRTEMDEAGVCQSCGEKLVCIDIDPRETENFASSLTKLACQREVKADF 328

Query: 1063 NHFQKRLER 1089
              FQ+ L+R
Sbjct: 329  VQFQEWLQR 337


>ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
            mitochondrial-like [Vitis vinifera]
          Length = 895

 Score =  342 bits (878), Expect = 7e-92
 Identities = 177/308 (57%), Positives = 220/308 (71%)
 Frame = +1

Query: 163  LSSKGRRKAAHESPEAVLHRKLNQCSKAGDVVQALDLYDEARKMGFLLSPKHYNKLLYLC 342
            +S+K R+KA  ESPE VL  KL+ CSK GDVV+AL LYDEAR +G  LS  +YN LLYLC
Sbjct: 398  MSNKARKKARRESPEGVLRFKLDMCSKRGDVVEALRLYDEARSLGVPLSQHNYNVLLYLC 457

Query: 343  SIVQTDDATVLSRLGLERGFEIFQQMLNDQVKPNEXXXXXXXXXXXXKEDPEMAFELLKQ 522
            S   ++    +  L L+RGFEIF+QM  D ++PNE             EDPEMAF L+KQ
Sbjct: 458  SCSGSNGDENVVNLALKRGFEIFKQMGVDGIEPNEATFTSAARLACAMEDPEMAFNLVKQ 517

Query: 523  MKSAGIAPKLRSYAPALYGFCKRGDAEKAYQVDADMIESGVMAEEPELSALLEVSVGAKN 702
            MKS GI PKLRSY P L+GFCK+GDA +AY+VDA M+ESGV+AEEPEL ALL +SV ++ 
Sbjct: 518  MKSCGIPPKLRSYGPPLFGFCKKGDANRAYEVDAHMVESGVVAEEPELCALLGLSVESRW 577

Query: 703  EDKVYEMLRRLRAAVRQVSESTLRIIEDWFGSEYAASIGKGSWDADKVREGIVXXXXXXX 882
             D+VYEM+ RLRA+VRQVSEST  ++E WF SE AA +G+ +WD  KVREG+V       
Sbjct: 578  VDQVYEMMHRLRASVRQVSESTAEVVERWFNSEDAAGVGEENWDVGKVREGVVKGGGGWH 637

Query: 883  XXXXXXXXXXKVDKTHVNEDGMCLSCGEKLVSIDIDPKETENFAASLSKLACQREVKANF 1062
                      KV +T ++E G+C SCGEKLV IDIDP+ETENFA+SL+KLACQREVKA+F
Sbjct: 638  GQGWLGKGKWKVGRTEMDEAGVCQSCGEKLVGIDIDPRETENFASSLTKLACQREVKADF 697

Query: 1063 NHFQKRLE 1086
              FQ+ L+
Sbjct: 698  VQFQEWLQ 705