BLASTX nr result

ID: Glycyrrhiza23_contig00019440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019440
         (1092 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597983.1| Pentatricopeptide repeat-containing protein ...   201   3e-49
ref|XP_003542124.1| PREDICTED: pentatricopeptide repeat-containi...   192   1e-46
ref|XP_004158824.1| PREDICTED: pentatricopeptide repeat-containi...   178   2e-42
ref|XP_004136096.1| PREDICTED: uncharacterized protein LOC101205...   178   2e-42
ref|XP_002306508.1| predicted protein [Populus trichocarpa] gi|2...   174   4e-41

>ref|XP_003597983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355487031|gb|AES68234.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 520

 Score =  201 bits (511), Expect = 3e-49
 Identities = 93/110 (84%), Positives = 102/110 (92%)
 Frame = +2

Query: 8   NGCFPNAVSYNCFFACFEKPKEIIDLFDGMIQSGVRPGMDTYVMLLRKFGRWGFLRLAFM 187
           +GC PNAVSY CFFAC EKPK II+LFDGMI+SGVRP MDTYVMLL+KF RWGFLRL F+
Sbjct: 363 DGCSPNAVSYQCFFACLEKPKFIIELFDGMIESGVRPTMDTYVMLLKKFARWGFLRLVFL 422

Query: 188 VWNKMEELGCSPDEAAYNALIDALVDKGLIDMARKYDEEMLAKGLSPRPR 337
           VWN+MEELGCSPD +AYNALIDALV+KGLIDMARKYDEEMLAKGLSP+PR
Sbjct: 423 VWNRMEELGCSPDASAYNALIDALVEKGLIDMARKYDEEMLAKGLSPKPR 472


>ref|XP_003542124.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  192 bits (488), Expect = 1e-46
 Identities = 89/112 (79%), Positives = 99/112 (88%)
 Frame = +2

Query: 2   PHNGCFPNAVSYNCFFACFEKPKEIIDLFDGMIQSGVRPGMDTYVMLLRKFGRWGFLRLA 181
           P +GC P AVSY+CFFA  EKPK+I+ +FD M++SGVRP MDTYVMLL KFGRWGFLR  
Sbjct: 312 PSDGCHPTAVSYHCFFASMEKPKQILAMFDEMVESGVRPTMDTYVMLLNKFGRWGFLRPV 371

Query: 182 FMVWNKMEELGCSPDEAAYNALIDALVDKGLIDMARKYDEEMLAKGLSPRPR 337
           FMVWNKM++LGCSPD AAYNALIDALVDK LIDMARKYDEEMLAKGLSP+PR
Sbjct: 372 FMVWNKMKQLGCSPDAAAYNALIDALVDKALIDMARKYDEEMLAKGLSPKPR 423


>ref|XP_004158824.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
           mitochondrial-like [Cucumis sativus]
          Length = 450

 Score =  178 bits (452), Expect = 2e-42
 Identities = 83/108 (76%), Positives = 94/108 (87%)
 Frame = +2

Query: 14  CFPNAVSYNCFFACFEKPKEIIDLFDGMIQSGVRPGMDTYVMLLRKFGRWGFLRLAFMVW 193
           C PN ++Y+CFF   EKPKEI+ LFD MI+ GV P MDTYVMLLRKFGRWGFLR  F+VW
Sbjct: 323 CQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTYVMLLRKFGRWGFLRPVFLVW 382

Query: 194 NKMEELGCSPDEAAYNALIDALVDKGLIDMARKYDEEMLAKGLSPRPR 337
           NKMEELGCSP+E AYNALIDALV+KG+IDMARKYDEEM+AKGLSP+ R
Sbjct: 383 NKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAKGLSPKLR 430


>ref|XP_004136096.1| PREDICTED: uncharacterized protein LOC101205322 [Cucumis sativus]
          Length = 1559

 Score =  178 bits (452), Expect = 2e-42
 Identities = 83/108 (76%), Positives = 94/108 (87%)
 Frame = +2

Query: 14   CFPNAVSYNCFFACFEKPKEIIDLFDGMIQSGVRPGMDTYVMLLRKFGRWGFLRLAFMVW 193
            C PN ++Y+CFF   EKPKEI+ LFD MI+ GV P MDTYVMLLRKFGRWGFLR  F+VW
Sbjct: 874  CQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTYVMLLRKFGRWGFLRPVFLVW 933

Query: 194  NKMEELGCSPDEAAYNALIDALVDKGLIDMARKYDEEMLAKGLSPRPR 337
            NKMEELGCSP+E AYNALIDALV+KG+IDMARKYDEEM+AKGLSP+ R
Sbjct: 934  NKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAKGLSPKLR 981


>ref|XP_002306508.1| predicted protein [Populus trichocarpa] gi|222855957|gb|EEE93504.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  174 bits (440), Expect = 4e-41
 Identities = 79/112 (70%), Positives = 94/112 (83%)
 Frame = +2

Query: 2   PHNGCFPNAVSYNCFFACFEKPKEIIDLFDGMIQSGVRPGMDTYVMLLRKFGRWGFLRLA 181
           P +   P+  +Y+CFF C EKPKEI+ LFD MI++GV P MDTYVML+RKFGRWGFLR  
Sbjct: 320 PQSYIAPDVFTYHCFFRCLEKPKEILCLFDQMIENGVCPRMDTYVMLMRKFGRWGFLRPV 379

Query: 182 FMVWNKMEELGCSPDEAAYNALIDALVDKGLIDMARKYDEEMLAKGLSPRPR 337
           F+VW KME+LGCSPDE AYNALIDAL+ KG++DMARKYDEEM+AKGLS +PR
Sbjct: 380 FLVWKKMEKLGCSPDEFAYNALIDALIQKGMVDMARKYDEEMMAKGLSAKPR 431


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