BLASTX nr result

ID: Glycyrrhiza23_contig00019399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019399
         (874 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520054.1| PREDICTED: putative nuclear matrix constitue...   340   3e-91
ref|XP_002524388.1| ATP binding protein, putative [Ricinus commu...   271   1e-70
ref|XP_002312375.1| predicted protein [Populus trichocarpa] gi|2...   267   3e-69
ref|XP_002278531.2| PREDICTED: putative nuclear matrix constitue...   266   6e-69
emb|CBI27082.3| unnamed protein product [Vitis vinifera]              266   6e-69

>ref|XP_003520054.1| PREDICTED: putative nuclear matrix constituent protein 1-like
           protein-like [Glycine max]
          Length = 1210

 Score =  340 bits (871), Expect = 3e-91
 Identities = 190/254 (74%), Positives = 212/254 (83%), Gaps = 1/254 (0%)
 Frame = +3

Query: 114 MLTPQRKXXXXXXXXXTSFTPHRVGATTSSGLVPSAKGKAVIVADEPQQPPPLGSLSEAG 293
           M TPQRK          +FTP R G+        SAKGKAV    E   PPPLGSL+E  
Sbjct: 1   MFTPQRKAWPAA----AAFTPLRGGSA-------SAKGKAVA---EGPPPPPLGSLTET- 45

Query: 294 GQVAVGFDA-GNIEDWKKFREFGLLDEAVMQRKDQEALLEKVSRLEKELFDYQYNMGLLL 470
             VAVG DA G+ EDWK+F + GLLDEAVMQRKD EAL+EKVSRLE+ELFDYQYNMGLLL
Sbjct: 46  -TVAVGLDAAGDAEDWKRFTKLGLLDEAVMQRKDHEALVEKVSRLERELFDYQYNMGLLL 104

Query: 471 IEKKEWSSKFDQLRQELAETEEILKREQSAHLIALSEVEKREENLRKALSTEKQCGADLE 650
           IEKKEW+SKFDQLRQELAETEEILKREQSAHLIAL EVEKREENL+KALSTE+QCGADLE
Sbjct: 105 IEKKEWNSKFDQLRQELAETEEILKREQSAHLIALFEVEKREENLKKALSTERQCGADLE 164

Query: 651 KALRAMQKELAQAQSTSHTKLAEANALVDGIEEKSSVVNKKLHDAEAKLAEVNRKSAELD 830
           +ALRAMQ+E AQ +S+SHTKLA+ANALVDGIEEKSSVV+KKL DAEAKLAE+NRK+AELD
Sbjct: 165 RALRAMQEEHAQVKSSSHTKLAKANALVDGIEEKSSVVDKKLLDAEAKLAEINRKNAELD 224

Query: 831 VKLREVEVRESLLQ 872
           +KLR+V+VRESLLQ
Sbjct: 225 MKLRQVDVRESLLQ 238


>ref|XP_002524388.1| ATP binding protein, putative [Ricinus communis]
           gi|223536349|gb|EEF37999.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1172

 Score =  271 bits (693), Expect = 1e-70
 Identities = 151/258 (58%), Positives = 185/258 (71%), Gaps = 5/258 (1%)
 Frame = +3

Query: 114 MLTPQRKXXXXXXXXXTSFTPHRVGATTSSGLVPSAKGKAVIVAD-----EPQQPPPLGS 278
           M TPQR+               + GAT + G     KGKA+   D      P  PPP+ S
Sbjct: 1   MFTPQRRSSPAITTLTPRSEVRKSGATGNVG-----KGKAMTFIDGPTLLPPPPPPPVAS 55

Query: 279 LSEAGGQVAVGFDAGNIEDWKKFREFGLLDEAVMQRKDQEALLEKVSRLEKELFDYQYNM 458
           LS  G   A   +  ++EDW++F+E GLLDEAVM+RKD++AL+EK SRLEKELFDYQYNM
Sbjct: 56  LS--GNAEA---ETEDMEDWRRFKEAGLLDEAVMERKDRQALIEKASRLEKELFDYQYNM 110

Query: 459 GLLLIEKKEWSSKFDQLRQELAETEEILKREQSAHLIALSEVEKREENLRKALSTEKQCG 638
           GLLLIEKKEW+SKFD+LRQ LAE EEIL+REQSA++I  SE EKREENLRKAL  EKQC 
Sbjct: 111 GLLLIEKKEWTSKFDELRQALAEAEEILRREQSANIITFSEAEKREENLRKALGVEKQCV 170

Query: 639 ADLEKALRAMQKELAQAQSTSHTKLAEANALVDGIEEKSSVVNKKLHDAEAKLAEVNRKS 818
            DLEKALR +Q+E AQ +  S +KLA+A AL  GIEEKS  V +K+H AEAKL E+NR+S
Sbjct: 171 IDLEKALRDLQEERAQIKHASESKLADAKALSVGIEEKSLEVEEKMHAAEAKLTEINRRS 230

Query: 819 AELDVKLREVEVRESLLQ 872
            E+D+KL+EVE R+S+LQ
Sbjct: 231 LEVDMKLQEVEARDSMLQ 248


>ref|XP_002312375.1| predicted protein [Populus trichocarpa] gi|222852195|gb|EEE89742.1|
           predicted protein [Populus trichocarpa]
          Length = 1008

 Score =  267 bits (682), Expect = 3e-69
 Identities = 147/237 (62%), Positives = 181/237 (76%), Gaps = 5/237 (2%)
 Frame = +3

Query: 177 HRVGAT----TSSGLVPSAKGKAVIVADEP-QQPPPLGSLSEAGGQVAVGFDAGNIEDWK 341
           HR G      TS+G+   AKGKA+ + D     PPP+GSLS   G++    D  ++E W+
Sbjct: 2   HRSGGANAGATSTGI--GAKGKALALIDGALPPPPPVGSLSVNAGEL----DTEDVEAWR 55

Query: 342 KFREFGLLDEAVMQRKDQEALLEKVSRLEKELFDYQYNMGLLLIEKKEWSSKFDQLRQEL 521
           +FRE GLLDEA M+R+D+EALLEK SRLEKELFDYQYNMGLLLIEKKEW+SK+++LRQ  
Sbjct: 56  RFREVGLLDEAAMERRDREALLEKASRLEKELFDYQYNMGLLLIEKKEWTSKYEELRQAW 115

Query: 522 AETEEILKREQSAHLIALSEVEKREENLRKALSTEKQCGADLEKALRAMQKELAQAQSTS 701
           AETEEILKREQ+AHLIALSEVEKR+ENLRKALS EKQC  +LEKAL  +Q+E    +  S
Sbjct: 116 AETEEILKREQAAHLIALSEVEKRQENLRKALSVEKQCVGELEKALHDLQEEHVLIKKVS 175

Query: 702 HTKLAEANALVDGIEEKSSVVNKKLHDAEAKLAEVNRKSAELDVKLREVEVRESLLQ 872
            +KLA+A AL  G EEKS  V +K+  AE+KLAEVN KS+ELD+KL ++E RE+LLQ
Sbjct: 176 DSKLADAKALAAGNEEKSLEVEEKMRVAESKLAEVNMKSSELDMKLNQLEARENLLQ 232


>ref|XP_002278531.2| PREDICTED: putative nuclear matrix constituent protein 1-like
           protein-like [Vitis vinifera]
          Length = 1213

 Score =  266 bits (679), Expect = 6e-69
 Identities = 147/253 (58%), Positives = 185/253 (73%)
 Frame = +3

Query: 114 MLTPQRKXXXXXXXXXTSFTPHRVGATTSSGLVPSAKGKAVIVADEPQQPPPLGSLSEAG 293
           M TPQRK          S    + G    S  V   KGK+V   D P  PPPLGSLS  G
Sbjct: 1   MFTPQRKAWTGLSLTPRS-EAQKSGGGAVSNPVNGGKGKSVAFVDGP--PPPLGSLS--G 55

Query: 294 GQVAVGFDAGNIEDWKKFREFGLLDEAVMQRKDQEALLEKVSRLEKELFDYQYNMGLLLI 473
             +  G D G++EDW++ RE GLLDEA M+RKD+EAL+EKVS+L+ ELFDYQY+MGLLLI
Sbjct: 56  KAMLTGIDGGDMEDWRRLREAGLLDEAAMERKDREALVEKVSKLQNELFDYQYSMGLLLI 115

Query: 474 EKKEWSSKFDQLRQELAETEEILKREQSAHLIALSEVEKREENLRKALSTEKQCGADLEK 653
           EKKEW+SK+++L Q LAE +EILKRE+SAH IA+SEVEKREENLRKAL  E+QC A+LEK
Sbjct: 116 EKKEWTSKYEELSQALAEAQEILKREKSAHFIAISEVEKREENLRKALGVERQCVAELEK 175

Query: 654 ALRAMQKELAQAQSTSHTKLAEANALVDGIEEKSSVVNKKLHDAEAKLAEVNRKSAELDV 833
           AL  +  E +Q + +S TKL++ANALV  IE++S  V +KL  A+AKLAE +RKS+EL+ 
Sbjct: 176 ALGEIHAEHSQIKLSSETKLSDANALVAKIEKRSLEVEEKLLAADAKLAEASRKSSELER 235

Query: 834 KLREVEVRESLLQ 872
           KL+EVE RES+L+
Sbjct: 236 KLQEVEARESVLR 248


>emb|CBI27082.3| unnamed protein product [Vitis vinifera]
          Length = 1122

 Score =  266 bits (679), Expect = 6e-69
 Identities = 147/253 (58%), Positives = 185/253 (73%)
 Frame = +3

Query: 114 MLTPQRKXXXXXXXXXTSFTPHRVGATTSSGLVPSAKGKAVIVADEPQQPPPLGSLSEAG 293
           M TPQRK          S    + G    S  V   KGK+V   D P  PPPLGSLS  G
Sbjct: 1   MFTPQRKAWTGLSLTPRS-EAQKSGGGAVSNPVNGGKGKSVAFVDGP--PPPLGSLS--G 55

Query: 294 GQVAVGFDAGNIEDWKKFREFGLLDEAVMQRKDQEALLEKVSRLEKELFDYQYNMGLLLI 473
             +  G D G++EDW++ RE GLLDEA M+RKD+EAL+EKVS+L+ ELFDYQY+MGLLLI
Sbjct: 56  KAMLTGIDGGDMEDWRRLREAGLLDEAAMERKDREALVEKVSKLQNELFDYQYSMGLLLI 115

Query: 474 EKKEWSSKFDQLRQELAETEEILKREQSAHLIALSEVEKREENLRKALSTEKQCGADLEK 653
           EKKEW+SK+++L Q LAE +EILKRE+SAH IA+SEVEKREENLRKAL  E+QC A+LEK
Sbjct: 116 EKKEWTSKYEELSQALAEAQEILKREKSAHFIAISEVEKREENLRKALGVERQCVAELEK 175

Query: 654 ALRAMQKELAQAQSTSHTKLAEANALVDGIEEKSSVVNKKLHDAEAKLAEVNRKSAELDV 833
           AL  +  E +Q + +S TKL++ANALV  IE++S  V +KL  A+AKLAE +RKS+EL+ 
Sbjct: 176 ALGEIHAEHSQIKLSSETKLSDANALVAKIEKRSLEVEEKLLAADAKLAEASRKSSELER 235

Query: 834 KLREVEVRESLLQ 872
           KL+EVE RES+L+
Sbjct: 236 KLQEVEARESVLR 248


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