BLASTX nr result
ID: Glycyrrhiza23_contig00019398
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00019398 (206 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003597428.1| RNA-binding protein [Medicago truncatula] gi... 110 2e-22 ref|XP_002513488.1| nuclear acid binding protein, putative [Rici... 102 4e-20 ref|XP_002313332.1| predicted protein [Populus trichocarpa] gi|2... 101 6e-20 ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding prote... 97 1e-18 emb|CBI16387.3| unnamed protein product [Vitis vinifera] 97 1e-18 >ref|XP_003597428.1| RNA-binding protein [Medicago truncatula] gi|355486476|gb|AES67679.1| RNA-binding protein [Medicago truncatula] Length = 428 Score = 110 bits (274), Expect = 2e-22 Identities = 48/54 (88%), Positives = 53/54 (98%) Frame = +1 Query: 43 MATGYHQPSSIEEVRTLWIGDLQYWVDENYLTHCFAHTGEVVSIKIIRNKMTGQ 204 MAT YHQP+S+EEVRTLWIGDLQYWVDENYLTHCF+HTGEV+SIKIIRNK+TGQ Sbjct: 1 MATTYHQPASLEEVRTLWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQ 54 >ref|XP_002513488.1| nuclear acid binding protein, putative [Ricinus communis] gi|223547396|gb|EEF48891.1| nuclear acid binding protein, putative [Ricinus communis] Length = 412 Score = 102 bits (253), Expect = 4e-20 Identities = 44/51 (86%), Positives = 50/51 (98%) Frame = +1 Query: 52 GYHQPSSIEEVRTLWIGDLQYWVDENYLTHCFAHTGEVVSIKIIRNKMTGQ 204 GYHQP+++EEVRTLWIGDLQYWVDENYL+ CFAHTGEV+SIKIIRNK+TGQ Sbjct: 11 GYHQPATLEEVRTLWIGDLQYWVDENYLSSCFAHTGEVLSIKIIRNKITGQ 61 >ref|XP_002313332.1| predicted protein [Populus trichocarpa] gi|222849740|gb|EEE87287.1| predicted protein [Populus trichocarpa] Length = 415 Score = 101 bits (252), Expect = 6e-20 Identities = 44/51 (86%), Positives = 49/51 (96%) Frame = +1 Query: 52 GYHQPSSIEEVRTLWIGDLQYWVDENYLTHCFAHTGEVVSIKIIRNKMTGQ 204 GYHQP+++EEVRTLWIGDLQYW DE+YLT CFAHTGEVVSIKIIRNK+TGQ Sbjct: 9 GYHQPATLEEVRTLWIGDLQYWADESYLTSCFAHTGEVVSIKIIRNKLTGQ 59 >ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform 2 [Vitis vinifera] Length = 438 Score = 97.4 bits (241), Expect = 1e-18 Identities = 44/53 (83%), Positives = 48/53 (90%) Frame = +1 Query: 46 ATGYHQPSSIEEVRTLWIGDLQYWVDENYLTHCFAHTGEVVSIKIIRNKMTGQ 204 A Y QP+S+EEVRTLWIGDLQYWVDENYL CFAHTGEV+SIKIIRNK+TGQ Sbjct: 28 AQPYTQPTSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQ 80 >emb|CBI16387.3| unnamed protein product [Vitis vinifera] Length = 445 Score = 97.4 bits (241), Expect = 1e-18 Identities = 44/53 (83%), Positives = 48/53 (90%) Frame = +1 Query: 46 ATGYHQPSSIEEVRTLWIGDLQYWVDENYLTHCFAHTGEVVSIKIIRNKMTGQ 204 A Y QP+S+EEVRTLWIGDLQYWVDENYL CFAHTGEV+SIKIIRNK+TGQ Sbjct: 28 AQPYTQPTSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQ 80