BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019335
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like ...    92   4e-17
gb|ABK28199.1| unknown [Arabidopsis thaliana]                          90   2e-16
gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thali...    90   2e-16
gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thali...    87   1e-15
gb|AAD22368.1| putative non-LTR retroelement reverse transcripta...    87   2e-15

>dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 676

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/111 (42%), Positives = 66/111 (59%)
 Frame = -3

Query: 339 VFRDDTGAWRMGFAYNIGSCSILMGKLWGIHSTMVMAKELGCRHLWVKSDSATAMDSMNQ 160
           V RD+ G+W +GFA NIG CS  + +LWG++  +V+A E G R + ++ DSA  +  +  
Sbjct: 536 VIRDEHGSWLVGFALNIGVCSAPLAELWGVYYGLVVAWERGWRRVRLEVDSALVVGFLQS 595

Query: 159 GVSPSHHCASLVMAIQDLWKDFSDVQITHVYREANTIADWFATHAFSYPIG 7
           G+  SH  A LV            V+ITHVYREAN +AD  A +AF+ P G
Sbjct: 596 GIGDSHPLAFLVRLCHGFISKDWIVRITHVYREANRLADGLANYAFTLPFG 646


>gb|ABK28199.1| unknown [Arabidopsis thaliana]
          Length = 315

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/113 (40%), Positives = 65/113 (57%)
 Frame = -3

Query: 339 VFRDDTGAWRMGFAYNIGSCSILMGKLWGIHSTMVMAKELGCRHLWVKSDSATAMDSMNQ 160
           V RD+ GAWR GFA NIG CS  + +LWG++  + +A E     L ++ DS   +  +  
Sbjct: 174 VLRDEEGAWRGGFALNIGVCSAPLAELWGVYYGLYIAWERRVTRLEIEVDSEIVVGFLKI 233

Query: 159 GVSPSHHCASLVMAIQDLWKDFSDVQITHVYREANTIADWFATHAFSYPIGIH 1
           G++  H  + LV    D       V+I+HVYREAN +AD  A +AFS P+G H
Sbjct: 234 GINEVHPLSFLVRLCHDFISRDWRVRISHVYREANRLADGLANYAFSLPLGFH 286


>gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|20197456|gb|AAM15081.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 314

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/113 (40%), Positives = 65/113 (57%)
 Frame = -3

Query: 339 VFRDDTGAWRMGFAYNIGSCSILMGKLWGIHSTMVMAKELGCRHLWVKSDSATAMDSMNQ 160
           V RD+ GAWR GFA NIG CS  + +LWG++  + +A E     L ++ DS   +  +  
Sbjct: 174 VLRDEEGAWRGGFALNIGVCSAPLAELWGVYYGLYIAWERRVTRLEIEVDSEIVVGFLKI 233

Query: 159 GVSPSHHCASLVMAIQDLWKDFSDVQITHVYREANTIADWFATHAFSYPIGIH 1
           G++  H  + LV    D       V+I+HVYREAN +AD  A +AFS P+G H
Sbjct: 234 GINEVHPLSFLVRLCHDFISRDWRVRISHVYREANRLADGLANYAFSLPLGFH 286


>gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thaliana]
          Length = 314

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 45/113 (39%), Positives = 64/113 (56%)
 Frame = -3

Query: 339 VFRDDTGAWRMGFAYNIGSCSILMGKLWGIHSTMVMAKELGCRHLWVKSDSATAMDSMNQ 160
           V RD+ GAWR GFA NIG CS  + +LWG++  + +A E     L ++ DS   +  +  
Sbjct: 174 VLRDEEGAWRGGFALNIGVCSAPLAELWGVYYGLYIAWERRVTRLEIEVDSEIVVGFLKI 233

Query: 159 GVSPSHHCASLVMAIQDLWKDFSDVQITHVYREANTIADWFATHAFSYPIGIH 1
            ++  H  + LV    D       V+I+HVYREAN +AD  A +AFS P+G H
Sbjct: 234 XINEVHPLSFLVRLCHDFISRDWRVRISHVYREANRLADGLANYAFSLPLGFH 286


>gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 321

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/113 (38%), Positives = 65/113 (57%)
 Frame = -3

Query: 339 VFRDDTGAWRMGFAYNIGSCSILMGKLWGIHSTMVMAKELGCRHLWVKSDSATAMDSMNQ 160
           V RD  GAW  GFA NIG CS  + +LWG++  + +A   G R + ++ DS   +  +  
Sbjct: 181 VLRDHNGAWIGGFAVNIGVCSAPLAELWGVYYGLFIAWGRGARRVELEVDSKMVVGFLTT 240

Query: 159 GVSPSHHCASLVMAIQDLWKDFSDVQITHVYREANTIADWFATHAFSYPIGIH 1
           G++ SH  + L+    D       V+I+HVYREAN +AD  A +AFS  +G+H
Sbjct: 241 GIADSHPLSFLLRLCYDFLSKGWIVRISHVYREANRLADGLANYAFSLSLGLH 293