BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019293
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540386.1| PREDICTED: pentatricopeptide repeat-containi...   250   1e-64
ref|XP_002278909.1| PREDICTED: pentatricopeptide repeat-containi...   211   8e-53
ref|XP_004139374.1| PREDICTED: pentatricopeptide repeat-containi...   164   1e-38
ref|XP_002892331.1| pentatricopeptide repeat-containing protein ...   159   3e-37
ref|NP_563765.1| pentatricopeptide repeat-containing protein [Ar...   157   2e-36

>ref|XP_003540386.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06270-like [Glycine max]
          Length = 342

 Score =  250 bits (639), Expect = 1e-64
 Identities = 129/181 (71%), Positives = 139/181 (76%)
 Frame = +2

Query: 56  ATMHRRFLLHFCPILNQCPSVRSVSSSQRLEQVVRDEVEAKNYVKIPDLLISLESCQXXX 235
           A MH RFLL F PILN+CP  RSVSS Q LEQ VR EVEAKNY+KIP+LLIS ++CQ   
Sbjct: 5   AMMHYRFLLCFRPILNRCPLGRSVSSLQNLEQAVRAEVEAKNYIKIPELLISSDACQISN 64

Query: 236 XXXXXXXXTQNLQVQIVDEMLQSFIPLRPRSKPQXXXXXXXXXXXXXXHPLPLALAVLQR 415
                    QN++VQIVDEMLQS IP+RPRSK Q              HP PLALAVLQR
Sbjct: 65  PFSFFSSFPQNIRVQIVDEMLQSLIPIRPRSKAQLTYSYLLSYTLQSSHPFPLALAVLQR 124

Query: 416 TLRSGCVPVPQTLVLLSSAWLDRRCLSHSVANILLEMQSIGYHPDCGTCNYLLSSLCAVD 595
           TLRSGCVPVPQT VLLSSAWLD+ CLSHSVANILL+MQSIGYHPDCGTCNYLLSSLCAVD
Sbjct: 125 TLRSGCVPVPQTHVLLSSAWLDQHCLSHSVANILLQMQSIGYHPDCGTCNYLLSSLCAVD 184

Query: 596 Q 598
           Q
Sbjct: 185 Q 185


>ref|XP_002278909.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06270
           [Vitis vinifera] gi|302143379|emb|CBI21940.3| unnamed
           protein product [Vitis vinifera]
          Length = 343

 Score =  211 bits (537), Expect = 8e-53
 Identities = 111/184 (60%), Positives = 132/184 (71%), Gaps = 1/184 (0%)
 Frame = +2

Query: 50  IGATMHRRFLLHFCPILNQCPSVRSVSSSQRLEQVVRDEVEAKNYVKIPDLLISLE-SCQ 226
           IGAT   R L HF   L Q  S+ S++SSQ LE+ ++  VE+K Y KIPDLLISLE +C 
Sbjct: 3   IGATKLCRSLFHFHYSLRQISSIHSITSSQTLEESIKAAVESKTYQKIPDLLISLEETCL 62

Query: 227 XXXXXXXXXXXTQNLQVQIVDEMLQSFIPLRPRSKPQXXXXXXXXXXXXXXHPLPLALAV 406
                      +QNL+ Q+VDE+LQSFIPLRPRS+PQ              +PLPLALA+
Sbjct: 63  NPNPFSFLSTFSQNLRTQVVDEILQSFIPLRPRSRPQIAYACLLSFTLQSANPLPLALAI 122

Query: 407 LQRTLRSGCVPVPQTLVLLSSAWLDRRCLSHSVANILLEMQSIGYHPDCGTCNYLLSSLC 586
           LQRTLRSGC+PVPQT +LLSSAWL RR  SHSV+NIL EMQSIGY+PDCGTCNYL+ SLC
Sbjct: 123 LQRTLRSGCIPVPQTHLLLSSAWLSRRRQSHSVSNILSEMQSIGYYPDCGTCNYLILSLC 182

Query: 587 AVDQ 598
           A+DQ
Sbjct: 183 AIDQ 186


>ref|XP_004139374.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06270-like [Cucumis sativus]
           gi|449483078|ref|XP_004156487.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g06270-like [Cucumis sativus]
          Length = 343

 Score =  164 bits (415), Expect = 1e-38
 Identities = 90/184 (48%), Positives = 113/184 (61%), Gaps = 1/184 (0%)
 Frame = +2

Query: 50  IGATMHRRFLLHFCPILNQCPSVRSVSSSQRLEQVVRDEVEAKNYVKIPDLLISL-ESCQ 226
           IG T    FLL+F   L Q  S+ S+S SQ L+  ++  VE+K+Y K+PDL  SL E+C 
Sbjct: 3   IGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEACH 62

Query: 227 XXXXXXXXXXXTQNLQVQIVDEMLQSFIPLRPRSKPQXXXXXXXXXXXXXXHPLPLALAV 406
                        NL+ Q+VDE+LQS I +RPRSK Q               P PL+L V
Sbjct: 63  NPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSLPV 122

Query: 407 LQRTLRSGCVPVPQTLVLLSSAWLDRRCLSHSVANILLEMQSIGYHPDCGTCNYLLSSLC 586
           LQR L SGCVP PQT  LLSSAWL +R  + SVANIL++MQSIGY PD   CNYL+SSLC
Sbjct: 123 LQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISSLC 182

Query: 587 AVDQ 598
           ++ +
Sbjct: 183 SIGE 186


>ref|XP_002892331.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338173|gb|EFH68590.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 343

 Score =  159 bits (402), Expect = 3e-37
 Identities = 85/180 (47%), Positives = 116/180 (64%), Gaps = 2/180 (1%)
 Frame = +2

Query: 65  HRRFLLHFCPILNQC-PSVRSVSSSQRLEQVVRDEVEAKNYVKIPDLLISL-ESCQXXXX 238
           H R  L +    N C P  RS+SS + +E+ ++  VE K Y++IP+L++SL E  Q    
Sbjct: 7   HLRKPLAYARSFNACFPFFRSISSFEAVEKAIKCAVETKEYLRIPELVVSLKEPYQNSML 66

Query: 239 XXXXXXXTQNLQVQIVDEMLQSFIPLRPRSKPQXXXXXXXXXXXXXXHPLPLALAVLQRT 418
                      +++++DE+LQSF+P+RPRS P+               PLPL+ A+LQRT
Sbjct: 67  FSFLSAFQHQHRIRVIDEILQSFVPVRPRSLPKIVYSSLLTYCLQSSDPLPLSFAILQRT 126

Query: 419 LRSGCVPVPQTLVLLSSAWLDRRCLSHSVANILLEMQSIGYHPDCGTCNYLLSSLCAVDQ 598
           LRSGC+P PQT +LLS AWL+RR  S SVA+I+ EM+ IGY PD GTCNYL+SSLCAVD+
Sbjct: 127 LRSGCLPNPQTQLLLSDAWLERRRGSQSVADIINEMKLIGYSPDTGTCNYLVSSLCAVDK 186


>ref|NP_563765.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75264068|sp|Q9LNC0.1|PPR16_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g06270 gi|8844132|gb|AAF80224.1|AC025290_13 Contains
           similarity to an unknown protein F23N19.4 gi|6630464
           from Arabidopsis thaliana gb|AC007190 and contains
           multiple PPR PF|01535 repeats. EST gb|T44174 comes from
           this gene [Arabidopsis thaliana]
           gi|17529194|gb|AAL38823.1| unknown protein [Arabidopsis
           thaliana] gi|20465473|gb|AAM20196.1| unknown protein
           [Arabidopsis thaliana] gi|21536601|gb|AAM60933.1|
           unknown [Arabidopsis thaliana]
           gi|332189849|gb|AEE27970.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 343

 Score =  157 bits (396), Expect = 2e-36
 Identities = 84/180 (46%), Positives = 118/180 (65%), Gaps = 2/180 (1%)
 Frame = +2

Query: 65  HRRFLLHFCPILNQC-PSVRSVSSSQRLEQVVRDEVEAKNYVKIPDLLISL-ESCQXXXX 238
           H R  L +    + C P  RS+SS + +E+ ++  VE K Y++IP+L++SL E  Q    
Sbjct: 7   HLRKPLAYSRSFDVCIPFFRSISSFEAVEKAIKCAVETKEYLRIPELVVSLKEPYQNSTL 66

Query: 239 XXXXXXXTQNLQVQIVDEMLQSFIPLRPRSKPQXXXXXXXXXXXXXXHPLPLALAVLQRT 418
                   ++ +++++DE+LQSF+P+RPRS P+               PLPL+ A+LQRT
Sbjct: 67  FSFLSAFQRHHRIRVIDEILQSFVPVRPRSLPKIVYSSLLTYCLQSSDPLPLSFAILQRT 126

Query: 419 LRSGCVPVPQTLVLLSSAWLDRRCLSHSVANILLEMQSIGYHPDCGTCNYLLSSLCAVDQ 598
           LRSGC+P PQT +LLS AWL+RR  S SVA+I+ EM+ IGY PD GTCNYL+SSLCAVD+
Sbjct: 127 LRSGCLPNPQTHLLLSDAWLERRRGSQSVADIINEMKLIGYSPDTGTCNYLVSSLCAVDK 186