BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019263
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637458.1| Transcription elongation factor SPT6 [Medica...   172   6e-41
ref|XP_003637370.1| Transcription elongation factor SPT6 [Medica...   172   6e-41
ref|XP_003526351.1| PREDICTED: transcription elongation factor S...   154   2e-35
ref|XP_003624787.1| Transcription elongation factor SPT6 [Medica...    59   7e-07
gb|AAC27151.1| Similar to gb|U46691 putative chromatin structure...    58   2e-06

>ref|XP_003637458.1| Transcription elongation factor SPT6 [Medicago truncatula]
           gi|355503393|gb|AES84596.1| Transcription elongation
           factor SPT6 [Medicago truncatula]
          Length = 2159

 Score =  172 bits (436), Expect = 6e-41
 Identities = 104/189 (55%), Positives = 117/189 (61%)
 Frame = +1

Query: 142 DIVXXXXXXXXIRENKSINQDKLSDGKYKRLKKAGIDTELMEHSSNDEGSLFXXXXXXXX 321
           +IV        IRENK +NQ K+SDGK KRLKK+G+D E MEHSS DEGSLF        
Sbjct: 74  NIVLDDDDLELIRENKRLNQGKMSDGKLKRLKKSGVDAEPMEHSS-DEGSLFDDFSEEDD 132

Query: 322 XXXXXXMADFIVNEGVNVNRNGDSLGQRKFKGIQXXXXXXXXXXXXXXXXXXLEEHIGEV 501
                 M+DFIV+E   V   GDSL Q+KFK ++                     H    
Sbjct: 133 D-----MSDFIVDEEPVVYGKGDSLRQKKFKDLKHSSLLSKEAKQRSGKSGL---HTVSG 184

Query: 502 QTTNTYVAGAGNSLADTDIPERMQIIEDIVGPAPVDRTSIEEESSWILRQLESNINQLFS 681
              N +VAG GNS+ADTD+PERMQIIED VG  PVDR SIEEESSWILRQL SNIN LFS
Sbjct: 185 DPKNIHVAGEGNSVADTDLPERMQIIEDTVGSFPVDRMSIEEESSWILRQLVSNINPLFS 244

Query: 682 EAKSCGLVD 708
           EAKSCGLVD
Sbjct: 245 EAKSCGLVD 253


>ref|XP_003637370.1| Transcription elongation factor SPT6 [Medicago truncatula]
           gi|355503305|gb|AES84508.1| Transcription elongation
           factor SPT6 [Medicago truncatula]
          Length = 547

 Score =  172 bits (436), Expect = 6e-41
 Identities = 104/189 (55%), Positives = 117/189 (61%)
 Frame = +1

Query: 142 DIVXXXXXXXXIRENKSINQDKLSDGKYKRLKKAGIDTELMEHSSNDEGSLFXXXXXXXX 321
           +IV        IRENK +NQ K+SDGK KRLKK+G+D E MEHSS DEGSLF        
Sbjct: 55  NIVLDDDDLELIRENKRLNQGKMSDGKLKRLKKSGVDAEPMEHSS-DEGSLFDDFSEEDD 113

Query: 322 XXXXXXMADFIVNEGVNVNRNGDSLGQRKFKGIQXXXXXXXXXXXXXXXXXXLEEHIGEV 501
                 M+DFIV+E   V   GDSL Q+KFK ++                     H    
Sbjct: 114 D-----MSDFIVDEEPVVYGKGDSLRQKKFKDLKHSSLLSKEAKQRSGKSGL---HTVSG 165

Query: 502 QTTNTYVAGAGNSLADTDIPERMQIIEDIVGPAPVDRTSIEEESSWILRQLESNINQLFS 681
              N +VAG GNS+ADTD+PERMQIIED VG  PVDR SIEEESSWILRQL SNIN LFS
Sbjct: 166 DPKNIHVAGEGNSVADTDLPERMQIIEDTVGSFPVDRMSIEEESSWILRQLVSNINPLFS 225

Query: 682 EAKSCGLVD 708
           EAKSCGLVD
Sbjct: 226 EAKSCGLVD 234


>ref|XP_003526351.1| PREDICTED: transcription elongation factor SPT6-like [Glycine max]
          Length = 1622

 Score =  154 bits (388), Expect = 2e-35
 Identities = 99/206 (48%), Positives = 120/206 (58%), Gaps = 17/206 (8%)
 Frame = +1

Query: 142 DIVXXXXXXXXIRENKSINQDKLSDGKYKRLKKAGIDTELMEHSSNDEGSLF-XXXXXXX 318
           +IV        IRENKS NQ+ L DGK+KRL+KAG+D+ELME+SS+D  SLF        
Sbjct: 81  NIVLDDEDLELIRENKSFNQETLRDGKFKRLRKAGVDSELMEYSSDDGVSLFDDIAEDET 140

Query: 319 XXXXXXXMADFIVNEGVNVNRNGDSLGQRKFKGIQXXXXXXXXXXXXXXXXXXLEEHIGE 498
                  MADFIV++   +   GDSL Q+K KGI+                  LE HIG+
Sbjct: 141 NDDVEDDMADFIVDDEDVIYGKGDSLRQKKLKGIK-NSPAFSKDKHSFGKEGQLENHIGK 199

Query: 499 VQ----------------TTNTYVAGAGNSLADTDIPERMQIIEDIVGPAPVDRTSIEEE 630
           VQ                 T+ + AG  N + D DIPERMQII+DIVG A +DR SIEEE
Sbjct: 200 VQIHATKSDDPNKYKSFIPTDMHTAGEDNCVNDMDIPERMQIIQDIVGSA-IDRMSIEEE 258

Query: 631 SSWILRQLESNINQLFSEAKSCGLVD 708
           SSWIL QL SNIN LF+EAKSC LV+
Sbjct: 259 SSWILCQLASNINPLFNEAKSCRLVN 284


>ref|XP_003624787.1| Transcription elongation factor SPT6 [Medicago truncatula]
           gi|355499802|gb|AES81005.1| Transcription elongation
           factor SPT6 [Medicago truncatula]
          Length = 737

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 53/185 (28%), Positives = 80/185 (43%), Gaps = 26/185 (14%)
 Frame = +1

Query: 181 ENKSINQDKLSDGKYKRLKKAGIDTELMEHS-----SNDEGS-LFXXXXXXXXXXXXXXM 342
           E+ +IN  +    K+KRLKK G D E  E S     ++DEG+ L               M
Sbjct: 77  EDNNINVHRPKTKKFKRLKK-GSDNEEQEFSGSGRTADDEGTHLQDIAEEEEDAYTGDEM 135

Query: 343 ADFIVNEGVNVNRNGDSLGQRKFKGI--------------------QXXXXXXXXXXXXX 462
           ADFIV+E   V++NG  +  +K K +                    +             
Sbjct: 136 ADFIVDEE-EVDQNGAPVRNKKPKCVKRPISSSALAEAQEIIGNVDELLEARNQTREKND 194

Query: 463 XXXXXLEEHIGEVQTTNTYVAGAGNSLADTDIPERMQIIEDIVGPAPVDRTSIEEESSWI 642
                LE+    +  +  Y+      + + DIPERMQI E+  G   +D +SI+EES WI
Sbjct: 195 NRETRLEDEFEPIVLSEKYMTERDGRIRELDIPERMQISEESTGAHSLDGSSIDEESQWI 254

Query: 643 LRQLE 657
           ++QL+
Sbjct: 255 VKQLK 259


>gb|AAC27151.1| Similar to gb|U46691 putative chromatin structure regulator
           (SUPT6H) from Homo sapiens. ESTs gb|T42908, gb|AA586170
           and gb|AA395125 come from this gene [Arabidopsis
           thaliana]
          Length = 1684

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/65 (43%), Positives = 37/65 (56%)
 Frame = +1

Query: 478 LEEHIGEVQTTNTYVAGAGNSLADTDIPERMQIIEDIVGPAPVDRTSIEEESSWILRQLE 657
           LE+       +  Y+ G  + +   DIPERMQI E+  G  PVD  SIEEES+WI  QL 
Sbjct: 299 LEDEFEPTVLSEKYMTGNDDEIRQLDIPERMQISEESTGSPPVDEISIEEESNWIYAQLA 358

Query: 658 SNINQ 672
           S + +
Sbjct: 359 SQLRE 363