BLASTX nr result
ID: Glycyrrhiza23_contig00019261
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00019261
(482 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003615696.1| Pentatricopeptide repeat-containing protein ... 253 1e-65
ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containi... 237 6e-61
ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi... 201 5e-50
ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arab... 197 6e-49
ref|NP_173402.2| pentatricopeptide repeat-containing protein [Ar... 196 2e-48
>ref|XP_003615696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517031|gb|AES98654.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 887
Score = 253 bits (645), Expect = 1e-65
Identities = 124/159 (77%), Positives = 137/159 (86%)
Frame = -3
Query: 480 KGRINHALDLLREMFLAGVEPNSFTIXXXXXXXXXXXXXSIGLEIHSIAIKMSLVDDVLV 301
KGRI+HALDLL+EMFLAGVE N+ TI S+GLEIHSIA+KM+LVD+VLV
Sbjct: 332 KGRISHALDLLKEMFLAGVEANNITIASAASACAALKSLSMGLEIHSIAVKMNLVDNVLV 391
Query: 300 GNSLIDMYSKCGNLEGAQSIFDMMLERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESNS 121
GNSLIDMY KCG+L+ AQ IFDMM ERDVYSWNSIIGGYFQAGFCGKAHELFMKMQES+S
Sbjct: 392 GNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDS 451
Query: 120 PPNVVTWNTLITGYMQSGAEDQALDLFKRIEKDGKIKRN 4
PPN++TWN +ITGYMQSGAEDQALDLFK IEKDGK KRN
Sbjct: 452 PPNIITWNIMITGYMQSGAEDQALDLFKSIEKDGKTKRN 490
Score = 93.6 bits (231), Expect = 1e-17
Identities = 51/142 (35%), Positives = 78/142 (54%)
Frame = -3
Query: 453 LLREMFLAGVEPNSFTIXXXXXXXXXXXXXSIGLEIHSIAIKMSLVDDVLVGNSLIDMYS 274
L M GV P+ F + G IHS+ I+ + + NS++ +Y+
Sbjct: 170 LFYAMMRDGVLPDEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYA 229
Query: 273 KCGNLEGAQSIFDMMLERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESNSPPNVVTWNT 94
KCG ++ A+ IFD M ERD +WN++I G+ Q G G+A + F MQ+ P++VTWN
Sbjct: 230 KCGEMDCAKKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNI 289
Query: 93 LITGYMQSGAEDQALDLFKRIE 28
LI+ Y Q G D A+DL +++E
Sbjct: 290 LISCYNQLGHCDLAIDLMRKME 311
Score = 85.5 bits (210), Expect = 4e-15
Identities = 49/159 (30%), Positives = 81/159 (50%)
Frame = -3
Query: 477 GRINHALDLLREMFLAGVEPNSFTIXXXXXXXXXXXXXSIGLEIHSIAIKMSLVDDVLVG 298
G+ + AL + R M + PNS TI EIH A++ LV ++ V
Sbjct: 505 GQKDKALQIFRNMQFCHILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVS 564
Query: 297 NSLIDMYSKCGNLEGAQSIFDMMLERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESNSP 118
N LID Y+K GNL +++IF+ + +D SWNS++ Y G A +LF +M++
Sbjct: 565 NLLIDSYAKSGNLMYSKNIFNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQ 624
Query: 117 PNVVTWNTLITGYMQSGAEDQALDLFKRIEKDGKIKRNV 1
PN T+ +++ Y +G D+ +F I KD +++ +
Sbjct: 625 PNRGTFASILLAYGHAGMVDEGKSVFSCITKDYLVRQGM 663
>ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Glycine max]
Length = 945
Score = 237 bits (605), Expect = 6e-61
Identities = 117/160 (73%), Positives = 133/160 (83%)
Frame = -3
Query: 480 KGRINHALDLLREMFLAGVEPNSFTIXXXXXXXXXXXXXSIGLEIHSIAIKMSLVDDVLV 301
KGRIN A DLLR+M + GVEPNS TI S+G EIHSIA+K S+VDD+L+
Sbjct: 333 KGRINEAFDLLRDMLIVGVEPNSITIASAASACASVKSLSMGSEIHSIAVKTSMVDDILI 392
Query: 300 GNSLIDMYSKCGNLEGAQSIFDMMLERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESNS 121
GNSLIDMY+K G+LE AQSIFD+MLERDVYSWNSIIGGY QAGFCGKAHELFMKMQES+S
Sbjct: 393 GNSLIDMYAKGGDLEAAQSIFDVMLERDVYSWNSIIGGYCQAGFCGKAHELFMKMQESDS 452
Query: 120 PPNVVTWNTLITGYMQSGAEDQALDLFKRIEKDGKIKRNV 1
PPNVVTWN +ITG+MQ+G ED+AL+LF RIEKDGKIK NV
Sbjct: 453 PPNVVTWNVMITGFMQNGDEDEALNLFLRIEKDGKIKPNV 492
Score = 99.0 bits (245), Expect = 4e-19
Identities = 54/147 (36%), Positives = 77/147 (52%)
Frame = -3
Query: 459 LDLLREMFLAGVEPNSFTIXXXXXXXXXXXXXSIGLEIHSIAIKMSLVDDVLVGNSLIDM 280
++L +M GV P+ F + G IHS+ I+ + + V NS++ +
Sbjct: 169 VELFYDMMQHGVLPDDFLLPKVLKACGKFRDIETGRLIHSLVIRGGMCSSLHVNNSILAV 228
Query: 279 YSKCGNLEGAQSIFDMMLERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESNSPPNVVTW 100
Y+KCG + A+ IF M ER+ SWN II GY Q G +A + F MQE P +VTW
Sbjct: 229 YAKCGEMSCAEKIFRRMDERNCVSWNVIITGYCQRGEIEQAQKYFDAMQEEGMEPGLVTW 288
Query: 99 NTLITGYMQSGAEDQALDLFKRIEKDG 19
N LI Y Q G D A+DL +++E G
Sbjct: 289 NILIASYSQLGHCDIAMDLMRKMESFG 315
Score = 83.2 bits (204), Expect = 2e-14
Identities = 44/151 (29%), Positives = 78/151 (51%)
Frame = -3
Query: 462 ALDLLREMFLAGVEPNSFTIXXXXXXXXXXXXXSIGLEIHSIAIKMSLVDDVLVGNSLID 283
AL + R+M + + PN T+ EIH A + +LV ++ V N+ ID
Sbjct: 511 ALQIFRQMQFSNMAPNLVTVLTILPACTNLVAAKKVKEIHCCATRRNLVSELSVSNTFID 570
Query: 282 MYSKCGNLEGAQSIFDMMLERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESNSPPNVVT 103
Y+K GN+ ++ +FD + +D+ SWNS++ GY G A +LF +M++ P+ VT
Sbjct: 571 SYAKSGNIMYSRKVFDGLSPKDIISWNSLLSGYVLHGCSESALDLFDQMRKDGLHPSRVT 630
Query: 102 WNTLITGYMQSGAEDQALDLFKRIEKDGKIK 10
++I+ Y + D+ F I ++ +I+
Sbjct: 631 LTSIISAYSHAEMVDEGKHAFSNISEEYQIR 661
>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Vitis vinifera]
Length = 1545
Score = 201 bits (511), Expect = 5e-50
Identities = 93/157 (59%), Positives = 123/157 (78%)
Frame = -3
Query: 474 RINHALDLLREMFLAGVEPNSFTIXXXXXXXXXXXXXSIGLEIHSIAIKMSLVDDVLVGN 295
R + AL+L REM LAG+EPN T+ G+E+HS+A+K+ V+D+LVGN
Sbjct: 336 RRSQALELFREMLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGN 395
Query: 294 SLIDMYSKCGNLEGAQSIFDMMLERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESNSPP 115
SLIDMYSK G LE A+ +FDM+L++DVY+WNS+IGGY QAG+CGKA++LF+KM ES+ PP
Sbjct: 396 SLIDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPP 455
Query: 114 NVVTWNTLITGYMQSGAEDQALDLFKRIEKDGKIKRN 4
NVVTWN +I+GY+Q+G EDQA+DLF R+EKDG IKR+
Sbjct: 456 NVVTWNAMISGYIQNGDEDQAMDLFHRMEKDGLIKRD 492
Score = 107 bits (266), Expect = 1e-21
Identities = 55/134 (41%), Positives = 76/134 (56%)
Frame = -3
Query: 429 GVEPNSFTIXXXXXXXXXXXXXSIGLEIHSIAIKMSLVDDVLVGNSLIDMYSKCGNLEGA 250
G+ P+ F + G IHS+ I+ + ++ V NS++ +Y+KCG L A
Sbjct: 180 GIVPDEFLLPKILQACGNCGDAETGKLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCA 239
Query: 249 QSIFDMMLERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESNSPPNVVTWNTLITGYMQS 70
+ F+ M RD SWNSII GY Q G K+H+LF KMQE P +VTWN LI Y QS
Sbjct: 240 RRFFENMDYRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEGIEPGLVTWNILINSYSQS 299
Query: 69 GAEDQALDLFKRIE 28
G D A++L K++E
Sbjct: 300 GKCDDAMELMKKME 313
Score = 82.0 bits (201), Expect = 4e-14
Identities = 49/155 (31%), Positives = 78/155 (50%)
Frame = -3
Query: 477 GRINHALDLLREMFLAGVEPNSFTIXXXXXXXXXXXXXSIGLEIHSIAIKMSLVDDVLVG 298
G N AL + R+M + PNS T+ EIH ++ +L ++ V
Sbjct: 507 GHKNKALGIFRQMQSFCIRPNSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVA 566
Query: 297 NSLIDMYSKCGNLEGAQSIFDMMLERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESNSP 118
N LID Y+K GN+ AQ+IF + +D+ SWNS+I GY G A +LF +M +
Sbjct: 567 NCLIDTYAKSGNIVYAQTIFQGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVK 626
Query: 117 PNVVTWNTLITGYMQSGAEDQALDLFKRIEKDGKI 13
P+ T+ ++I + SG D+ +F + +D +I
Sbjct: 627 PSRGTFLSIIYAFSLSGMVDKGKQVFSSMMEDYQI 661
>ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
lyrata] gi|297338906|gb|EFH69323.1| hypothetical protein
ARALYDRAFT_472198 [Arabidopsis lyrata subsp. lyrata]
Length = 1490
Score = 197 bits (502), Expect = 6e-49
Identities = 88/153 (57%), Positives = 121/153 (79%)
Frame = -3
Query: 462 ALDLLREMFLAGVEPNSFTIXXXXXXXXXXXXXSIGLEIHSIAIKMSLVDDVLVGNSLID 283
ALD+ R+MFLAGV PN+ TI ++G E+HSIA+KM +DDVLVGNSL+D
Sbjct: 336 ALDMFRKMFLAGVVPNAVTIMSAVSACSYLKVINLGSEVHSIAVKMGFIDDVLVGNSLVD 395
Query: 282 MYSKCGNLEGAQSIFDMMLERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESNSPPNVVT 103
MYSKCG LE A+ +FD + +DVY+WNS+I GY QAG+CGKA+ELF +MQ++N PN++T
Sbjct: 396 MYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANVRPNIIT 455
Query: 102 WNTLITGYMQSGAEDQALDLFKRIEKDGKIKRN 4
WNT+I+GY+++G E +A+DLF+R+EKDGK++RN
Sbjct: 456 WNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRN 488
Score = 96.7 bits (239), Expect = 2e-18
Identities = 54/145 (37%), Positives = 76/145 (52%)
Frame = -3
Query: 453 LLREMFLAGVEPNSFTIXXXXXXXXXXXXXSIGLEIHSIAIKMSLVDDVLVGNSLIDMYS 274
L R M GV P+ F G IHS+ IK+ + + V NS++ +Y+
Sbjct: 168 LFRLMMEEGVLPDDFLFPKILQGCANCGDVETGKLIHSVVIKLGMSSCLRVSNSILAVYA 227
Query: 273 KCGNLEGAQSIFDMMLERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESNSPPNVVTWNT 94
KCG + A F M ERDV +WNS++ Y Q G +A EL +M++ P +VTWN
Sbjct: 228 KCGEWDFATKFFRRMKERDVVAWNSVLLAYCQNGKHEEAVELVEEMEKEGISPGLVTWNI 287
Query: 93 LITGYMQSGAEDQALDLFKRIEKDG 19
LI GY Q G D A+DL +++E G
Sbjct: 288 LIGGYNQLGKCDAAMDLMQKMENFG 312
Score = 77.8 bits (190), Expect = 8e-13
Identities = 48/152 (31%), Positives = 77/152 (50%)
Frame = -3
Query: 477 GRINHALDLLREMFLAGVEPNSFTIXXXXXXXXXXXXXSIGLEIHSIAIKMSLVDDVLVG 298
G+ + AL++ R+M + PNS TI + EIH ++ +L V
Sbjct: 503 GKKDDALEIFRKMQFSRFMPNSVTILSLLPACANLLGTKMVREIHGCVLRRNLDAIHAVK 562
Query: 297 NSLIDMYSKCGNLEGAQSIFDMMLERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESNSP 118
N+L D Y+K G++ +++IF M +D+ +WNS+IGGY G G A ELF +M+
Sbjct: 563 NALTDTYAKSGDIGYSKTIFMGMETKDIITWNSLIGGYVLHGSYGPALELFNQMKTQGIK 622
Query: 117 PNVVTWNTLITGYMQSGAEDQALDLFKRIEKD 22
PN T +++I + G D+ +F I D
Sbjct: 623 PNRGTLSSIILAHGLMGNVDEGKKVFYSIAND 654
Score = 57.8 bits (138), Expect = 9e-07
Identities = 28/82 (34%), Positives = 45/82 (54%)
Frame = -3
Query: 312 DVLVGNSLIDMYSKCGNLEGAQSIFDMMLERDVYSWNSIIGGYFQAGFCGKAHELFMKMQ 133
DV V L+ MY+KCG L A+ +FD M ER++Y+W+++IG Y + + +LF M
Sbjct: 114 DVFVETKLLSMYAKCGCLVDARKVFDSMRERNLYTWSAMIGAYSRENRWREVSKLFRLMM 173
Query: 132 ESNSPPNVVTWNTLITGYMQSG 67
E P+ + ++ G G
Sbjct: 174 EEGVLPDDFLFPKILQGCANCG 195
>ref|NP_173402.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75263158|sp|Q9FXH1.1|PPR52_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g19720; AltName: Full=Protein DYW7
gi|10086495|gb|AAG12555.1|AC007797_15 Unknown Protein
[Arabidopsis thaliana] gi|332191770|gb|AEE29891.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 894
Score = 196 bits (497), Expect = 2e-48
Identities = 88/153 (57%), Positives = 120/153 (78%)
Frame = -3
Query: 462 ALDLLREMFLAGVEPNSFTIXXXXXXXXXXXXXSIGLEIHSIAIKMSLVDDVLVGNSLID 283
ALD+ R+MFLAGV PN+ TI + G E+HSIA+KM +DDVLVGNSL+D
Sbjct: 336 ALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVD 395
Query: 282 MYSKCGNLEGAQSIFDMMLERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESNSPPNVVT 103
MYSKCG LE A+ +FD + +DVY+WNS+I GY QAG+CGKA+ELF +MQ++N PN++T
Sbjct: 396 MYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIIT 455
Query: 102 WNTLITGYMQSGAEDQALDLFKRIEKDGKIKRN 4
WNT+I+GY+++G E +A+DLF+R+EKDGK++RN
Sbjct: 456 WNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRN 488
Score = 99.8 bits (247), Expect = 2e-19
Identities = 56/154 (36%), Positives = 79/154 (51%)
Frame = -3
Query: 480 KGRINHALDLLREMFLAGVEPNSFTIXXXXXXXXXXXXXSIGLEIHSIAIKMSLVDDVLV 301
+ R L R M GV P+ F G IHS+ IK+ + + V
Sbjct: 159 ENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRV 218
Query: 300 GNSLIDMYSKCGNLEGAQSIFDMMLERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESNS 121
NS++ +Y+KCG L+ A F M ERDV +WNS++ Y Q G +A EL +M++
Sbjct: 219 SNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGI 278
Query: 120 PPNVVTWNTLITGYMQSGAEDQALDLFKRIEKDG 19
P +VTWN LI GY Q G D A+DL +++E G
Sbjct: 279 SPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFG 312
Score = 79.0 bits (193), Expect = 4e-13
Identities = 49/152 (32%), Positives = 77/152 (50%)
Frame = -3
Query: 477 GRINHALDLLREMFLAGVEPNSFTIXXXXXXXXXXXXXSIGLEIHSIAIKMSLVDDVLVG 298
G+ + AL+L R+M + PNS TI + EIH ++ +L V
Sbjct: 503 GKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVK 562
Query: 297 NSLIDMYSKCGNLEGAQSIFDMMLERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESNSP 118
N+L D Y+K G++E +++IF M +D+ +WNS+IGGY G G A LF +M+
Sbjct: 563 NALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGIT 622
Query: 117 PNVVTWNTLITGYMQSGAEDQALDLFKRIEKD 22
PN T +++I + G D+ +F I D
Sbjct: 623 PNRGTLSSIILAHGLMGNVDEGKKVFYSIAND 654