BLASTX nr result

ID: Glycyrrhiza23_contig00019239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019239
         (2031 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636623.1| H/ACA ribonucleoprotein complex non-core sub...   483   e-134
ref|XP_002329402.1| predicted protein [Populus trichocarpa] gi|2...   293   2e-76
emb|CBI28917.3| unnamed protein product [Vitis vinifera]              289   2e-75
emb|CAN75706.1| hypothetical protein VITISV_031419 [Vitis vinifera]   286   1e-74
ref|XP_002517974.1| conserved hypothetical protein [Ricinus comm...   284   7e-74

>ref|XP_003636623.1| H/ACA ribonucleoprotein complex non-core subunit NAF1 [Medicago
            truncatula] gi|355502558|gb|AES83761.1| H/ACA
            ribonucleoprotein complex non-core subunit NAF1 [Medicago
            truncatula]
          Length = 567

 Score =  483 bits (1244), Expect = e-134
 Identities = 283/539 (52%), Positives = 323/539 (59%), Gaps = 17/539 (3%)
 Frame = +3

Query: 132  HNNGSELDPNXXXXXXXXXXXXKVGTLGGDTDTPIEEAVEKITLVSGSPPIXXXXXXXXX 311
            +NNGSELDPN            K+GT   D + PIE++VE+ITL    P +         
Sbjct: 48   NNNGSELDPNPFAAETPVAG--KLGT--SDDEIPIEKSVERITLTGDPPSVEVNGNEDKD 103

Query: 312  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARHAVDVEVEEGEISGSDEEKIVSWS 491
                                                 A D E  EG+IS  D+EK+VSWS
Sbjct: 104  DGSEGESESESSESESESSTSSSSTSGSDSDEDDEDDAEDEE--EGQIS--DDEKMVSWS 159

Query: 492  TXXXXXXXXXXXXXXGGPIRSKNELQNLPPVPPVDVTLEPHHQMLPVGVVMSIVGAQVIV 671
                            GPI+SKNE+QNLPPVPPVDV L PHH+MLPVGVVMS +GAQVIV
Sbjct: 160  AADGDLDDDEDVVV--GPIKSKNEIQNLPPVPPVDVCLAPHHKMLPVGVVMSTLGAQVIV 217

Query: 672  EGVEKHNPLSEGSILWLTENRKPLGLVDEIFGPVKNPYYIVRYNSENEVPVGIHGG-TLI 848
            EGVEKH PL+EGS+LWLTE+RKPLGLVDEIFGPVKNPYY+VRYNSEN+VP GI GG TL+
Sbjct: 218  EGVEKHEPLNEGSVLWLTESRKPLGLVDEIFGPVKNPYYVVRYNSENDVPAGIQGGTTLV 277

Query: 849  SFVPEFADHVLNNNKDLYKKGYDASGANDEELSDEIEFSDDEKEAEYRRMQRTTKRGVND 1028
            S VPEFA+HVL NNKDLY+KGYDASGA DEEL DE+EFSDDEKEAEYR+MQ+ TKRGVND
Sbjct: 278  SCVPEFAEHVL-NNKDLYRKGYDASGAYDEELFDEVEFSDDEKEAEYRKMQKMTKRGVND 336

Query: 1029 QXXXXXXXXXXXXXXXEHVLP-------------TIXXXXXXXLVDHGNCSAFSXXXXXX 1169
            Q               EHVLP                       V+ GN S FS      
Sbjct: 337  QNPGKKKNNKKKFSPKEHVLPPNAPVASPHVFPNVPNAPAAAPFVNKGNYSPFS---GIG 393

Query: 1170 XXXXXXVLPFPPVNAGPNFATNGMWTNGTTXXXXXXXXXXXNGFPTNGISCYPQNPQISH 1349
                  V PF P+NAGPNFA N MW N TT           N FP+N +S YPQN Q SH
Sbjct: 394  QGGTTTVSPFQPLNAGPNFAANSMWANQTTFPQQPQPSLPPNAFPSNAMSYYPQNTQFSH 453

Query: 1350 HLSVPGIPYQQQLHPNHGSFFPNMLPGLQPNIFA-QPMYALGLMGQNQMTFGLSSPFPQM 1526
               VPGIP+QQQ++P+HG+ FP M+PG+QPNIF+ QPMYA G +GQNQM       F Q+
Sbjct: 454  QFPVPGIPFQQQMNPSHGTHFPTMMPGVQPNIFSQQPMYAPGFLGQNQMP---QQSFQQI 510

Query: 1527 QS-PIFPA-QQGFPSTELQPDRNINLHSSSIPGAASQFHPGSSTSRGRKTFHGAGRRGW 1697
            Q  PIF A QQGFP TELQ         S I G  SQFHPGSS SRGR +F GA  RGW
Sbjct: 511  QQPPIFQAQQQGFPPTELQQ------RPSPISGNPSQFHPGSSGSRGRPSFRGASGRGW 563


>ref|XP_002329402.1| predicted protein [Populus trichocarpa] gi|222870452|gb|EEF07583.1|
            predicted protein [Populus trichocarpa]
          Length = 685

 Score =  293 bits (749), Expect = 2e-76
 Identities = 195/451 (43%), Positives = 236/451 (52%), Gaps = 28/451 (6%)
 Frame = +3

Query: 417  RHAVDVEVEEGEISGSDEEKIVSWSTXXXXXXXXXXXXXXGGPIRSKNELQNLPPVPPVD 596
            R   DVEV E E    D +K+V WS               G PIRSKNEL+ LPPVPPV 
Sbjct: 251  RDDTDVEVFEEE----DGDKMVEWSDFDEDEDAVNE----GDPIRSKNELKFLPPVPPVV 302

Query: 597  VTLEPHHQMLPVGVVMSIVGAQVIVEGVEKHNPLSEGSILWLTENRKPLGLVDEIFGPVK 776
             +LEPHHQM  VG V+S +G+QVIVEGVEKHNPL+EGSILW+TE R PLGLVDEIFGPVK
Sbjct: 303  ASLEPHHQMQAVGAVLSAIGSQVIVEGVEKHNPLNEGSILWITEKRSPLGLVDEIFGPVK 362

Query: 777  NPYYIVRYNSENEVPVGIHGGTLISFVPEFADHVLNNNKDLYKKGYDASGANDEELSDEI 956
            NPYY+VRYNSE+EVP GIH GT+ISFVPEFA+HVLN+ K+LYKKGYDASG  DEEL+ E 
Sbjct: 363  NPYYVVRYNSESEVPGGIHNGTVISFVPEFANHVLND-KNLYKKGYDASGEFDEELTKEA 421

Query: 957  EFSDDEKEAEYRRMQRTT----------KRGVNDQXXXXXXXXXXXXXXXEHVLPTIXXX 1106
            EFSDD++EAEY+RM + +          K+  N +                  +PT    
Sbjct: 422  EFSDDDEEAEYKRMLKMSKRGIDCEMVGKKKNNRRKVKNRGGGWKNNKPSGEQIPT---- 477

Query: 1107 XXXXLVDHGNCSAFSXXXXXXXXXXXXVLPFPPVNAGPNFATNGMWTNGTTXXXXXXXXX 1286
                          S                P       F  NG W N            
Sbjct: 478  ---------GVDQLSPDQNLFNESSVGTAFAPVPQTTGVFTPNGGWVN-EAPSHQPETLA 527

Query: 1287 XXNGFPTNGISCYPQNPQISHHLSVP---GIPYQQQLHPNHGSFFPNMLPGLQPNIFAQP 1457
               GFP N +  +    Q+ H   +P   G+P QQQ +P  G       PG  PN FA P
Sbjct: 528  IPGGFPANNMP-WAARSQLQHPYQIPRAIGMPIQQQFNPCKGPLPNAFFPGGHPNFFAGP 586

Query: 1458 MY-----ALGLMGQ---NQMTFGLS---SPFPQMQSPIFPAQQGFPSTELQPDRNINLHS 1604
             Y     A+G  GQ   NQ  FG      P PQ  + I   +QG  S  L  ++N +  S
Sbjct: 587  TYPPPWPAVG--GQNYFNQAAFGTGFQVQPNPQAMNTI---EQGMMSRGLPLEQNCSFQS 641

Query: 1605 SSIP----GAASQFHPGSSTSRGRKTFHGAG 1685
             +IP     A  QF+ G+S+S GRK +   G
Sbjct: 642  PAIPPGNIKAPQQFNTGASSSHGRKPYRRGG 672


>emb|CBI28917.3| unnamed protein product [Vitis vinifera]
          Length = 444

 Score =  289 bits (740), Expect = 2e-75
 Identities = 176/417 (42%), Positives = 226/417 (54%), Gaps = 32/417 (7%)
 Frame = +3

Query: 537  GGPIRSKNELQNLPPVPPVDVTLEPHHQMLPVGVVMSIVGAQVIVEGVEKHNPLSEGSIL 716
            GG I+SKNE++ LPPVPP+DVTL+PHHQ LPVGVV SI+GA+VIVEG EKH PL+EGSIL
Sbjct: 19   GGAIKSKNEIEALPPVPPLDVTLQPHHQTLPVGVVSSIIGAKVIVEGAEKHKPLTEGSIL 78

Query: 717  WLTENRKPLGLVDEIFGPVKNPYYIVRYNSENEVPVGIHGGTLISFVPEFADHVLNNNKD 896
            W+TE+R PLGLVDEIFGPVKNPYY+VRYNS++EVP GI+ GT ISFVPEFA+H+L N ++
Sbjct: 79   WITESRSPLGLVDEIFGPVKNPYYVVRYNSDSEVPAGINEGTFISFVPEFANHIL-NERN 137

Query: 897  LYKKGYDASGANDEELSDEIEFSDDEKEAEYRRMQRTTKRGVNDQXXXXXXXXXXXXXXX 1076
            LYKKGYDASG NDEE+SD +EFSDDE+EAE+++  +  KRG NDQ               
Sbjct: 138  LYKKGYDASGENDEEVSD-VEFSDDEEEAEHKKTLKMIKRGTNDQKPGNKKNKRKKVKNR 196

Query: 1077 EHVLPTIXXXXXXXLVDHGNCSAFSXXXXXXXXXXXXVLPFPPVNAGPNFATNGM----- 1241
            +               D       S            V    P   G  FA  G+     
Sbjct: 197  DGAWKN---GQHSTAADQFFDDKHSKTPDHDQHHTPQVAASSPFGVGQFFAGGGLVPPYP 253

Query: 1242 ---------------WTNGTTXXXXXXXXXXXNGFPTNGISCYPQNPQISHHLSVP---G 1367
                           W +G             N FPT+ +   PQN    H   +P   G
Sbjct: 254  QMAQVAGFIPPPSGIWASGIMPCQQQQNTVFPNSFPTDTLPWPPQNHH-PHPFQMPMPNG 312

Query: 1368 IPYQQQLHPNHGSFFPNMLPGLQPNIFAQPMY----ALGLM-GQNQMTFGLSSPFPQMQS 1532
            + +QQQ  P H +F   +L   Q N F +P Y     LG   G NQ  FG+       + 
Sbjct: 313  MLFQQQFDPGHAAFPNAVLSSGQANFFMRPTYPPWPGLGAQSGLNQAAFGMGLQGQHARP 372

Query: 1533 PIFPAQQGFPSTELQPDRNINLHSSSIP----GAASQFHPGSSTSRGRKTFHGAGRR 1691
             I   +QG  S+ L   ++ ++   ++      A+ QF+  +S  RG+K FH  G R
Sbjct: 373  IISAGEQGALSSGLPMGQSCDVQPPAVTQGKIQASQQFNQRASFGRGKKPFHRGGGR 429


>emb|CAN75706.1| hypothetical protein VITISV_031419 [Vitis vinifera]
          Length = 641

 Score =  286 bits (733), Expect = 1e-74
 Identities = 174/417 (41%), Positives = 225/417 (53%), Gaps = 32/417 (7%)
 Frame = +3

Query: 537  GGPIRSKNELQNLPPVPPVDVTLEPHHQMLPVGVVMSIVGAQVIVEGVEKHNPLSEGSIL 716
            GG I+SKNE++ LPPVPP+DVTL+PHHQ LPVGVV SI+GA+VIVEG EKH PL+EGSIL
Sbjct: 213  GGAIKSKNEIEALPPVPPLDVTLQPHHQTLPVGVVSSIIGAKVIVEGAEKHKPLTEGSIL 272

Query: 717  WLTENRKPLGLVDEIFGPVKNPYYIVRYNSENEVPVGIHGGTLISFVPEFADHVLNNNKD 896
            W+TE+R PLGL+DEIFGPVKNPYY+VRYNS++EVP GI+ GT ISFVP+FA+H+L N ++
Sbjct: 273  WITESRSPLGLIDEIFGPVKNPYYVVRYNSDSEVPAGINEGTFISFVPQFANHIL-NERN 331

Query: 897  LYKKGYDASGANDEELSDEIEFSDDEKEAEYRRMQRTTKRGVNDQXXXXXXXXXXXXXXX 1076
            LYKKGYDASG NDEE+SD +EFSDDE+EAE++R  +  KRG NDQ               
Sbjct: 332  LYKKGYDASGENDEEVSD-VEFSDDEEEAEHKRTLKMIKRGTNDQKPGNKKNKRKKVKNR 390

Query: 1077 EHVLPTIXXXXXXXLVDHGNCSAFSXXXXXXXXXXXXVLPFPPVNAGPNFATNGM----- 1241
            +               D       S            V    P   G  FA  G+     
Sbjct: 391  DGAWKN---GQHSTAADQFFDDKHSKTPDHDQHHTPQVAASSPFGVGQFFAGGGLVPPYP 447

Query: 1242 ---------------WTNGTTXXXXXXXXXXXNGFPTNGISCYPQNPQISHHLSVP---G 1367
                           W +G             N FP + +   PQN    H   +P   G
Sbjct: 448  QMAQVAGFIPPPSGIWASGIMPCQQQQNTVFPNSFPRDTLPWPPQNHH-PHPFQMPMPNG 506

Query: 1368 IPYQQQLHPNHGSFFPNMLPGLQPNIFAQPMY----ALGLM-GQNQMTFGLSSPFPQMQS 1532
            + +QQQ  P H +F   +L   Q N F +P Y     LG   G NQ  FG+       + 
Sbjct: 507  MLFQQQFDPGHAAFPNAVLSSGQANFFMRPTYPPWPGLGAQSGLNQAAFGMGLQGQHARP 566

Query: 1533 PIFPAQQGFPSTELQPDRNINLHSSSIP----GAASQFHPGSSTSRGRKTFHGAGRR 1691
             I   +QG  S+ L   ++ ++   ++      A+ QF+  +S  RG+K FH  G R
Sbjct: 567  IISAGEQGALSSGLPMGQSCDVQPPAVTQGKIQASQQFNQRASFGRGKKPFHRGGGR 623


>ref|XP_002517974.1| conserved hypothetical protein [Ricinus communis]
            gi|223542956|gb|EEF44492.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 786

 Score =  284 bits (726), Expect = 7e-74
 Identities = 198/478 (41%), Positives = 242/478 (50%), Gaps = 53/478 (11%)
 Frame = +3

Query: 417  RHAVDVEVEEGEI---------------SGSDEEKIVSWSTXXXXXXXXXXXXXX--GGP 545
            R   + E+EEGEI                  DE+ +V WS                  GP
Sbjct: 317  REVEEGEIEEGEIREINGEGMVHKSDEDEEEDEKNMVEWSDVEFDDIEEEEEGTGLMKGP 376

Query: 546  IRSKNELQNLPPVPPVDVTLEPHHQMLPVGVVMSIVGAQVIVEGVEKHNPLSEGSILWLT 725
            IRS+NEL+ LPPVPPVDVTL+PHHQ+LPVGVV+SI+ AQVIVEGVEKHNPL+EGSILW+T
Sbjct: 377  IRSQNELKFLPPVPPVDVTLQPHHQVLPVGVVLSIINAQVIVEGVEKHNPLNEGSILWIT 436

Query: 726  ENRKPLGLVDEIFGPVKNPYYIVRYNSENEVPVGIHGGTLISFVPEFADHVLNNNKDLYK 905
            E R PLGLVDEIFGPV+NPYY+VRYNSE+EVP GI  GT ISFV EFA+HVL N K+LYK
Sbjct: 437  EKRSPLGLVDEIFGPVQNPYYVVRYNSESEVPSGISQGTRISFVAEFANHVL-NEKNLYK 495

Query: 906  KGYDASGANDEELSDEIEFSDDEKEAEYRRMQRTTKRGVNDQXXXXXXXXXXXXXXXEHV 1085
            KGYDASG NDEELSDE EFSDDEKEAEY RM++ +KRG+N Q                  
Sbjct: 496  KGYDASGENDEELSDEAEFSDDEKEAEYMRMKKMSKRGINGQ------------------ 537

Query: 1086 LPTIXXXXXXXLVDHGNCSAFSXXXXXXXXXXXXVLPFPPVNAGP-----------NFAT 1232
              T+         D                        PP N              N+++
Sbjct: 538  --TVGNKKNSRTKDKNRNGNRKNVGPLGQHASMCGGQLPPPNQNQQNTSSAVASMNNYSS 595

Query: 1233 NGMWTNGTTXXXXXXXXXXXNGF--PTNG------ISCYPQNPQISHHLSVPGIPY--QQ 1382
            +  +T G +            G   P+NG       S  PQN  I        + +  Q 
Sbjct: 596  SSSFTGGASFFQPFPPMAQSAGLFQPSNGAWISGLASQQPQNAVIPGGFPANNMSWAAQN 655

Query: 1383 QLHPNHGSFFPNMLPGLQPNIFAQPMYALGLMGQNQMTFGLS-SPFP----QMQSPIFPA 1547
            Q HP       N +P  Q  I +Q   + G+    QM+F    SP+P    Q      P 
Sbjct: 656  QFHPPSRMPITNGMPFQQQFIPSQGSLSNGVPPGGQMSFFAGPSPWPAVIGQNCFNQAPF 715

Query: 1548 QQGFPSTELQPDRNINLH------SSSIPG---AASQFHPGSSTSR-GRKTFHGAGRR 1691
            + GF     QP  N+         S+ IPG   A  QF+ G+ + R GR+ FH  G R
Sbjct: 716  EMGFQVQPTQPIMNVGDQGNGLGVSAVIPGNIQAPQQFNSGAPSGRGGRRQFHRGGGR 773


Top