BLASTX nr result

ID: Glycyrrhiza23_contig00019211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019211
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550594.1| PREDICTED: uncharacterized protein LOC100787...   288   8e-76
ref|XP_003533112.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal RN...   268   1e-69
gb|AAM65530.1| unknown [Arabidopsis thaliana]                         204   1e-50
ref|NP_191259.1| nucleolar essential protein-related protein [Ar...   203   3e-50
ref|XP_002307982.1| predicted protein [Populus trichocarpa] gi|2...   202   4e-50

>ref|XP_003550594.1| PREDICTED: uncharacterized protein LOC100787336 [Glycine max]
          Length = 457

 Score =  288 bits (737), Expect = 8e-76
 Identities = 143/167 (85%), Positives = 155/167 (92%)
 Frame = -2

Query: 516 QNVRSPAIFILDNASLKKGLVRKNWKILNSDEDAQFLLKQKKNLNDYRPDIIHEALRCIL 337
           +NV+SPAIFILDNASLKKGLVRK WKILNSDEDAQFLLKQKKNLNDYRPDIIHEALRCIL
Sbjct: 290 RNVKSPAIFILDNASLKKGLVRKKWKILNSDEDAQFLLKQKKNLNDYRPDIIHEALRCIL 349

Query: 336 DSPLNKAGMVGAVYVKIDQGIVFEVKPHVRIPRTCKRFCGVIMELLQKSSVRAKDTNEVL 157
           DSPLNKAGMVGA+YVKIDQG +FEVKPHV++P+TC RFCGVIM+LLQKS VRAK TNEVL
Sbjct: 350 DSPLNKAGMVGAIYVKIDQGGMFEVKPHVQLPQTCSRFCGVIMDLLQKSLVRAKHTNEVL 409

Query: 156 LRAIEEPITHHLPVNSHIVGLSYTSEKLVDIEKYVSVCSNDLSPVFV 16
           L  +EEPITHHLPVNS+ VGLS TSEK VDIE+YVS+ SNDLS VFV
Sbjct: 410 LHVVEEPITHHLPVNSYTVGLSSTSEKSVDIEEYVSLWSNDLSLVFV 456


>ref|XP_003533112.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal RNA small subunit
           methyltransferase NEP1-like [Glycine max]
          Length = 191

 Score =  268 bits (684), Expect = 1e-69
 Identities = 139/172 (80%), Positives = 147/172 (85%), Gaps = 2/172 (1%)
 Frame = -2

Query: 510 VRSPAIFILDNASLKKGLVRKNWKILNSDEDAQFLLKQKKNLN--DYRPDIIHEALRCIL 337
           +RSPAIFILDNASLKKGLV+K WKILNSDEDA FL+KQKKNLN  DYRPDIIHEALRCIL
Sbjct: 1   MRSPAIFILDNASLKKGLVKKKWKILNSDEDAXFLMKQKKNLNLNDYRPDIIHEALRCIL 60

Query: 336 DSPLNKAGMVGAVYVKIDQGIVFEVKPHVRIPRTCKRFCGVIMELLQKSSVRAKDTNEVL 157
           DSPLNKAGMVGA+YVK+DQ  VFEVKPHVRIPRTC RFCGVI+EL              L
Sbjct: 61  DSPLNKAGMVGAIYVKMDQRGVFEVKPHVRIPRTCNRFCGVIIEL--------------L 106

Query: 156 LRAIEEPITHHLPVNSHIVGLSYTSEKLVDIEKYVSVCSNDLSPVFVVGAMV 1
           LR +EEPIT HLPVNSHIVGLSYTSEKLVDIE+YVSV SNDLSPVFVVG MV
Sbjct: 107 LRVVEEPITRHLPVNSHIVGLSYTSEKLVDIEEYVSVWSNDLSPVFVVGTMV 158


>gb|AAM65530.1| unknown [Arabidopsis thaliana]
          Length = 298

 Score =  204 bits (519), Expect = 1e-50
 Identities = 105/221 (47%), Positives = 160/221 (72%), Gaps = 4/221 (1%)
 Frame = -2

Query: 654 KSKLKRKRVEKQTPNFTISKDEEKDVEKEGIASNDGILSS-PLV-HSPQNVRSPAIFILD 481
           K++   K+ +K++ +     ++E++V +E  A+ + I+   P+V ++P   +S  +F+L+
Sbjct: 37  KARESSKKAKKESTSRAEEDNDEEEVTEEATAAAEDIVGGIPIVLNAPNKEKSGIVFVLE 96

Query: 480 NASLKKGLVRKNWKILNSDEDAQFLLKQKKNLNDYRPDIIHEALRCILDSPLNKAGMVGA 301
            ASL+   V K +++LNSD+ A FL K  +N  DYRPDI H+AL  ILDSP+NKAG + A
Sbjct: 97  KASLEVAKVGKTYQLLNSDDHANFLKKNNRNPADYRPDITHQALLMILDSPVNKAGRLKA 156

Query: 300 VYVKIDQGIVFEVKPHVRIPRTCKRFCGVIMELLQKSSVRAKDTNEVLLRAIEEPI-THH 124
           VYV+ ++G++FEVKPHVRIPRT KRF G++++LLQK S+ A ++ E LLR ++ PI  HH
Sbjct: 157 VYVRTEKGVLFEVKPHVRIPRTFKRFAGIMLQLLQKLSITAVNSREKLLRCVKNPIEEHH 216

Query: 123 LPVNSHIVGLSYTSEKLVDIEKYV-SVCSNDLSPVFVVGAM 4
           LPVNSH +G S++SEKLV+++K++ +VC +D   VFVVGAM
Sbjct: 217 LPVNSHRIGFSHSSEKLVNMQKHLATVCDDDRDTVFVVGAM 257


>ref|NP_191259.1| nucleolar essential protein-related protein [Arabidopsis thaliana]
           gi|6911870|emb|CAB72170.1| putative protein [Arabidopsis
           thaliana] gi|28466945|gb|AAO44081.1| At3g57000
           [Arabidopsis thaliana] gi|110735698|dbj|BAE99829.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332646076|gb|AEE79597.1| nucleolar essential
           protein-related protein [Arabidopsis thaliana]
          Length = 298

 Score =  203 bits (516), Expect = 3e-50
 Identities = 105/221 (47%), Positives = 159/221 (71%), Gaps = 4/221 (1%)
 Frame = -2

Query: 654 KSKLKRKRVEKQTPNFTISKDEEKDVEKEGIASNDGILSS-PLV-HSPQNVRSPAIFILD 481
           K++   K+ +K++ +     ++E++V  E  A+ + I+   P+V ++P   +S  +F+L+
Sbjct: 37  KARESSKKAKKESTSRAEEDNDEEEVTVEATAAAEDIVGGIPIVLNAPNKEKSGIVFVLE 96

Query: 480 NASLKKGLVRKNWKILNSDEDAQFLLKQKKNLNDYRPDIIHEALRCILDSPLNKAGMVGA 301
            ASL+   V K +++LNSD+ A FL K  +N  DYRPDI H+AL  ILDSP+NKAG + A
Sbjct: 97  KASLEVAKVGKTYQLLNSDDHANFLKKNNRNPADYRPDITHQALLMILDSPVNKAGRLKA 156

Query: 300 VYVKIDQGIVFEVKPHVRIPRTCKRFCGVIMELLQKSSVRAKDTNEVLLRAIEEPI-THH 124
           VYV+ ++G++FEVKPHVRIPRT KRF G++++LLQK S+ A ++ E LLR ++ PI  HH
Sbjct: 157 VYVRTEKGVLFEVKPHVRIPRTFKRFAGIMLQLLQKLSITAVNSREKLLRCVKNPIEEHH 216

Query: 123 LPVNSHIVGLSYTSEKLVDIEKYV-SVCSNDLSPVFVVGAM 4
           LPVNSH +G S++SEKLV+++K++ +VC +D   VFVVGAM
Sbjct: 217 LPVNSHRIGFSHSSEKLVNMQKHLATVCDDDRDTVFVVGAM 257


>ref|XP_002307982.1| predicted protein [Populus trichocarpa] gi|222853958|gb|EEE91505.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  202 bits (515), Expect = 4e-50
 Identities = 108/198 (54%), Positives = 145/198 (73%), Gaps = 1/198 (0%)
 Frame = -2

Query: 594 DEEKDVEKEGIASNDGILSSPLVHSPQNVRSPA-IFILDNASLKKGLVRKNWKILNSDED 418
           +EEK+++  G+   +GI   P+V S Q  + P  IF+L+ ASL+   V K+++ILNS+E 
Sbjct: 51  EEEKEMQLPGV--EEGI---PIVPSHQTGKKPGVIFVLEKASLEVAKVGKSYQILNSEEH 105

Query: 417 AQFLLKQKKNLNDYRPDIIHEALRCILDSPLNKAGMVGAVYVKIDQGIVFEVKPHVRIPR 238
           A FL + KKN  DYRPDII++AL  ILDSPLNKAG + AVYVK D+G++FEVKPHVRIPR
Sbjct: 106 ANFLRRNKKNPADYRPDIIYQALLSILDSPLNKAGRLRAVYVKTDKGVLFEVKPHVRIPR 165

Query: 237 TCKRFCGVIMELLQKSSVRAKDTNEVLLRAIEEPITHHLPVNSHIVGLSYTSEKLVDIEK 58
           T KRF G++++LLQK S+ A    E LLR I+ P+T +LP+NS  +G S++SEKLV +EK
Sbjct: 166 TYKRFAGIMLQLLQKLSITAVGNREKLLRVIKNPVTQYLPLNSRKIGFSHSSEKLVQMEK 225

Query: 57  YVSVCSNDLSPVFVVGAM 4
           YV+   +D   VFVVGAM
Sbjct: 226 YVAGVGDDTDLVFVVGAM 243


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