BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019163
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containi...   292   4e-77
ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containi...   291   7e-77
gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsu...   265   4e-69
ref|XP_002329779.1| predicted protein [Populus trichocarpa] gi|2...   263   3e-68
ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containi...   261   1e-67

>ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Glycine max]
          Length = 582

 Score =  292 bits (747), Expect = 4e-77
 Identities = 146/208 (70%), Positives = 167/208 (80%)
 Frame = +3

Query: 6   PDSATLVCVSSACSQLGSLELACWVHDCILSNGIRVNVILGTSLINMFSRCGDVSRARAV 185
           PDSAT V V SACSQLGSL+L CW+H+CI+  GIR+NV+L TSL+NMFSRCGDV RARAV
Sbjct: 207 PDSATFVSVLSACSQLGSLDLGCWLHECIVGTGIRMNVVLATSLVNMFSRCGDVGRARAV 266

Query: 186 FDSMMEEEVNVVAWTAMISGYGMHGHGVEAIELYQRMKARGVAPTTVTFVAVLSACAHAG 365
           FDSM   E NVV+WTAMISGYGMHG+GVEA+E++ RMKA GV P  VT+VAVLSACAHAG
Sbjct: 267 FDSM--NEGNVVSWTAMISGYGMHGYGVEAMEVFHRMKACGVVPNRVTYVAVLSACAHAG 324

Query: 366 LVCEGREVFASMRNXXXXXXXXXXXXCMVDMLGRAGLLTEAYKFIKEELSPHELVPAVWT 545
           L+ EGR VFASM+             CMVDM GR GLL EAY+F++  LS  ELVPAVWT
Sbjct: 325 LINEGRLVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVR-GLSSEELVPAVWT 383

Query: 546 AMLGACKMHKNFDLGVEAAQHLISLQPE 629
           AMLGACKMHKNFDLGVE A++LIS +PE
Sbjct: 384 AMLGACKMHKNFDLGVEVAENLISAEPE 411



 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 3/203 (1%)
 Frame = +3

Query: 6   PDSATLVCVSSACSQLGSLELACWVHDCILSNGIRVNVILGTSLINMFSRCGDVSRARAV 185
           P + T   V  AC+ L  L L   VH  +  +G   N  +  +L+  +++      AR V
Sbjct: 106 PSTYTFTSVIKACADLSLLRLGTIVHSHVFVSGYASNSFVQAALVTFYAKSCTPRVARKV 165

Query: 186 FDSMMEEEVNVVAWTAMISGYGMHGHGVEAIELYQRMKARGVAPTTVTFVAVLSACAHAG 365
           FD M +   +++AW +MISGY  +G   EA+E++ +M+  G  P + TFV+VLSAC+  G
Sbjct: 166 FDEMPQR--SIIAWNSMISGYEQNGLASEAVEVFNKMRESGGEPDSATFVSVLSACSQLG 223

Query: 366 ---LVCEGREVFASMRNXXXXXXXXXXXXCMVDMLGRAGLLTEAYKFIKEELSPHELVPA 536
              L C   E                    +V+M  R G +  A + + + ++   +V  
Sbjct: 224 SLDLGCWLHECIVG----TGIRMNVVLATSLVNMFSRCGDVGRA-RAVFDSMNEGNVVS- 277

Query: 537 VWTAMLGACKMHKNFDLGVEAAQ 605
            WTAM+    MH     GVEA +
Sbjct: 278 -WTAMISGYGMH---GYGVEAME 296


>ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Glycine max]
          Length = 582

 Score =  291 bits (745), Expect = 7e-77
 Identities = 145/208 (69%), Positives = 167/208 (80%)
 Frame = +3

Query: 6   PDSATLVCVSSACSQLGSLELACWVHDCILSNGIRVNVILGTSLINMFSRCGDVSRARAV 185
           PDSAT V V SACSQLGSL+  CW+HDCI+ +GI +NV+L TSL+NMFSRCGDV RARAV
Sbjct: 207 PDSATFVSVLSACSQLGSLDFGCWLHDCIVGSGITMNVVLATSLVNMFSRCGDVGRARAV 266

Query: 186 FDSMMEEEVNVVAWTAMISGYGMHGHGVEAIELYQRMKARGVAPTTVTFVAVLSACAHAG 365
           F SM+E   NVV WTAMISGYGMHG+GVEA+E++ RMKARGV P +VTFVAVLSACAHAG
Sbjct: 267 FYSMIEG--NVVLWTAMISGYGMHGYGVEAMEVFHRMKARGVVPNSVTFVAVLSACAHAG 324

Query: 366 LVCEGREVFASMRNXXXXXXXXXXXXCMVDMLGRAGLLTEAYKFIKEELSPHELVPAVWT 545
           L+ EGR VFASM+             CMVDM GR GLL EAY+F+K  L+  ELVPAVWT
Sbjct: 325 LIDEGRSVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVK-GLNSDELVPAVWT 383

Query: 546 AMLGACKMHKNFDLGVEAAQHLISLQPE 629
           AMLGACKMHKNFDLGVE A++LI+ +PE
Sbjct: 384 AMLGACKMHKNFDLGVEVAENLINAEPE 411



 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 4/204 (1%)
 Frame = +3

Query: 6   PDSATLVCVSSACSQLGSLELACWVHDCILSNGIRVNVILGTSLINMFSRCGDVSRARAV 185
           P + T   V  AC+ L  L +   VH  +  +G   +  +  +LI  +++      AR V
Sbjct: 106 PSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGYASDSFVQAALIAFYAKSCTPRVARKV 165

Query: 186 FDSMMEEEVNVVAWTAMISGYGMHGHGVEAIELYQRMKARGVAPTTVTFVAVLSACAHAG 365
           FD M +   ++VAW +MISGY  +G   EA+E++ +M+   V P + TFV+VLSAC+  G
Sbjct: 166 FDEMPQR--SIVAWNSMISGYEQNGLANEAVEVFNKMRESRVEPDSATFVSVLSACSQLG 223

Query: 366 LVCEGREVFASMRNXXXXXXXXXXXXCMVDMLGRAGLLTEA----YKFIKEELSPHELVP 533
            +  G  +   +               +V+M  R G +  A    Y  I+  +       
Sbjct: 224 SLDFGCWLHDCIVG-SGITMNVVLATSLVNMFSRCGDVGRARAVFYSMIEGNV------- 275

Query: 534 AVWTAMLGACKMHKNFDLGVEAAQ 605
            +WTAM+    MH     GVEA +
Sbjct: 276 VLWTAMISGYGMH---GYGVEAME 296


>gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
           gi|227463002|gb|ACP39953.1| pentatricopeptide repeat
           protein [Gossypium hirsutum]
          Length = 592

 Score =  265 bits (678), Expect = 4e-69
 Identities = 132/209 (63%), Positives = 159/209 (76%)
 Frame = +3

Query: 3   RPDSATLVCVSSACSQLGSLELACWVHDCILSNGIRVNVILGTSLINMFSRCGDVSRARA 182
           +PDS+T V + SAC+Q+G++ L  WVH+ I  N   +NV+LGT+L+NM+SRCG+VS+AR 
Sbjct: 216 KPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKARE 275

Query: 183 VFDSMMEEEVNVVAWTAMISGYGMHGHGVEAIELYQRMKARGVAPTTVTFVAVLSACAHA 362
           VFDSM  EE N+VAWTAMISGYGMHGHG +AIEL+  M   G  P  VTFVAVLSACAHA
Sbjct: 276 VFDSM--EEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHA 333

Query: 363 GLVCEGREVFASMRNXXXXXXXXXXXXCMVDMLGRAGLLTEAYKFIKEELSPHELVPAVW 542
           GLV EGR++F +M+             CMVDMLGRAG L EAY+FIK   SP E  PAVW
Sbjct: 334 GLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIK-NTSPKEPAPAVW 392

Query: 543 TAMLGACKMHKNFDLGVEAAQHLISLQPE 629
           TAMLGACKMHKNFDLGVE A+HL+S++PE
Sbjct: 393 TAMLGACKMHKNFDLGVEVAEHLLSIEPE 421



 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 58/193 (30%), Positives = 94/193 (48%)
 Frame = +3

Query: 18  TLVCVSSACSQLGSLELACWVHDCILSNGIRVNVILGTSLINMFSRCGDVSRARAVFDSM 197
           T   V  + + L +  +   +H  +   G  ++  +  +L++ +++ G V  AR VFD M
Sbjct: 120 TFSAVIKSSADLTAFSIGETIHCHVYICGYGLDAYVQAALVSFYAKSGHVMIARKVFDKM 179

Query: 198 MEEEVNVVAWTAMISGYGMHGHGVEAIELYQRMKARGVAPTTVTFVAVLSACAHAGLVCE 377
            E+   VVAW +MISGY  +G G EA+EL+  M+  GV P + TFV++LSACA  G +  
Sbjct: 180 PEK--TVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGL 237

Query: 378 GREVFASMRNXXXXXXXXXXXXCMVDMLGRAGLLTEAYKFIKEELSPHELVPAVWTAMLG 557
           G  V   +               +++M  R G +++A +      S  E     WTAM+ 
Sbjct: 238 GFWVHEYIAR-NCFDLNVVLGTALMNMYSRCGNVSKAREVFD---SMEEKNIVAWTAMIS 293

Query: 558 ACKMHKNFDLGVE 596
              MH +    +E
Sbjct: 294 GYGMHGHGSQAIE 306


>ref|XP_002329779.1| predicted protein [Populus trichocarpa] gi|222870841|gb|EEF07972.1|
           predicted protein [Populus trichocarpa]
          Length = 585

 Score =  263 bits (671), Expect = 3e-68
 Identities = 129/208 (62%), Positives = 158/208 (75%)
 Frame = +3

Query: 6   PDSATLVCVSSACSQLGSLELACWVHDCILSNGIRVNVILGTSLINMFSRCGDVSRARAV 185
           PDSAT V V SAC+ LG+  L CWVH+ I+ NG+ +NV+LGTSLINM+ RCG+VS+AR V
Sbjct: 210 PDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREV 269

Query: 186 FDSMMEEEVNVVAWTAMISGYGMHGHGVEAIELYQRMKARGVAPTTVTFVAVLSACAHAG 365
           FDSM E   NVVAWTAMISGYG +G+G +A+EL+  M+  G+ P ++TFVAVLSACAHAG
Sbjct: 270 FDSMKER--NVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAG 327

Query: 366 LVCEGREVFASMRNXXXXXXXXXXXXCMVDMLGRAGLLTEAYKFIKEELSPHELVPAVWT 545
           LV EGR +FAS+R             C+VDMLGRAGLL EAY FIKEE+ P    PA+ T
Sbjct: 328 LVNEGRRLFASIREEYHLVPGVEHNVCLVDMLGRAGLLDEAYNFIKEEI-PENPAPAILT 386

Query: 546 AMLGACKMHKNFDLGVEAAQHLISLQPE 629
           AMLGACKMHKNFDLG + A+HL++ +PE
Sbjct: 387 AMLGACKMHKNFDLGAQVAEHLLAAEPE 414



 Score =  101 bits (252), Expect = 1e-19
 Identities = 51/120 (42%), Positives = 75/120 (62%)
 Frame = +3

Query: 6   PDSATLVCVSSACSQLGSLELACWVHDCILSNGIRVNVILGTSLINMFSRCGDVSRARAV 185
           P + T   V  +C+ L +L+    VH  +L +G  ++V +  +L+ ++ +CGD+  AR V
Sbjct: 109 PSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKV 168

Query: 186 FDSMMEEEVNVVAWTAMISGYGMHGHGVEAIELYQRMKARGVAPTTVTFVAVLSACAHAG 365
           FD + E   ++VAW +MISGY  +G   EAI L+ RMK  GV P + TFV+VLSACAH G
Sbjct: 169 FDKIRER--SIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLG 226


>ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 663

 Score =  261 bits (666), Expect = 1e-67
 Identities = 125/209 (59%), Positives = 162/209 (77%)
 Frame = +3

Query: 3   RPDSATLVCVSSACSQLGSLELACWVHDCILSNGIRVNVILGTSLINMFSRCGDVSRARA 182
           +PDSAT+V + S+CSQLG+L+  CW+HD    NG  +NV+LGTSLINM++RCG+VS+AR 
Sbjct: 287 QPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKARE 346

Query: 183 VFDSMMEEEVNVVAWTAMISGYGMHGHGVEAIELYQRMKARGVAPTTVTFVAVLSACAHA 362
           VFDSM E   NVV WTAMISGYGMHG+G +A+EL+  M+A G  P  +TFVAVLSACAH+
Sbjct: 347 VFDSMKER--NVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHS 404

Query: 363 GLVCEGREVFASMRNXXXXXXXXXXXXCMVDMLGRAGLLTEAYKFIKEELSPHELVPAVW 542
           GL+ +GR VF+SM+             CMVDM GRAGLL +AY+FIK+ + P E  PAVW
Sbjct: 405 GLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFI-PKEPGPAVW 463

Query: 543 TAMLGACKMHKNFDLGVEAAQHLISLQPE 629
           T+MLGAC+MH+NFDLGV+ A+H++S++PE
Sbjct: 464 TSMLGACRMHRNFDLGVKVAEHVLSVEPE 492



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 49/185 (26%), Positives = 89/185 (48%)
 Frame = +3

Query: 18  TLVCVSSACSQLGSLELACWVHDCILSNGIRVNVILGTSLINMFSRCGDVSRARAVFDSM 197
           T   V  AC+ L +L L   +H  ++  G   ++ +  +LI ++++  D+  A+ VFD+M
Sbjct: 191 TFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAM 250

Query: 198 MEEEVNVVAWTAMISGYGMHGHGVEAIELYQRMKARGVAPTTVTFVAVLSACAHAGLVCE 377
            +    ++AW ++ISGY  +G   E+I L+  M   G  P + T V++LS+C+  G +  
Sbjct: 251 PQR--TIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDF 308

Query: 378 GREVFASMRNXXXXXXXXXXXXCMVDMLGRAGLLTEAYKFIKEELSPHELVPAVWTAMLG 557
           G  +     +             +++M  R G +++A +      S  E     WTAM+ 
Sbjct: 309 GCWLH-DYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFD---SMKERNVVTWTAMIS 364

Query: 558 ACKMH 572
              MH
Sbjct: 365 GYGMH 369