BLASTX nr result

ID: Glycyrrhiza23_contig00019162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019162
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600764.1| hypothetical protein MTR_3g069120 [Medicago ...   107   9e-24
ref|XP_003590567.1| Pentatricopeptide repeat-containing protein ...    99   4e-19
emb|CAN64638.1| hypothetical protein VITISV_033929 [Vitis vinifera]    59   3e-07
ref|XP_002317716.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_004166877.1| PREDICTED: uncharacterized LOC101205354 [Cuc...    57   2e-06

>ref|XP_003600764.1| hypothetical protein MTR_3g069120 [Medicago truncatula]
            gi|355489812|gb|AES71015.1| hypothetical protein
            MTR_3g069120 [Medicago truncatula]
          Length = 884

 Score =  107 bits (268), Expect(2) = 9e-24
 Identities = 53/74 (71%), Positives = 59/74 (79%), Gaps = 4/74 (5%)
 Frame = +2

Query: 5    QGNSVYRDTIYDTFIFRASEKSCEQ----TESVGLEMFDDLCPIDLRFDAPAKKLEHQGL 172
            QGNSV+ DTIYDTFIF+ SEKSCE+    TESVG EMFDDLCPI LRFDAP  K E Q L
Sbjct: 796  QGNSVHTDTIYDTFIFKVSEKSCEEPGEKTESVGEEMFDDLCPITLRFDAPVTKFEQQSL 855

Query: 173  KAYNLLKRQMSKWQ 214
            +A+ LLK +MSKWQ
Sbjct: 856  EAFTLLKLKMSKWQ 869



 Score = 27.3 bits (59), Expect(2) = 9e-24
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +3

Query: 213 KKSFDLYKEFCIQSKF 260
           + SFDLY EFC QS F
Sbjct: 869 QNSFDLYNEFCSQSGF 884


>ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355479615|gb|AES60818.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/67 (68%), Positives = 52/67 (77%)
 Frame = +2

Query: 11   NSVYRDTIYDTFIFRASEKSCEQTESVGLEMFDDLCPIDLRFDAPAKKLEHQGLKAYNLL 190
            NS+Y DTIYDTFIF   + SCEQTE VG EMFDDL PI+LRF+AP KK EHQ  +AY LL
Sbjct: 1069 NSIYTDTIYDTFIFHVLDNSCEQTEPVGEEMFDDLWPIELRFNAPVKKFEHQSSRAYILL 1128

Query: 191  KRQMSKW 211
            KR+M  W
Sbjct: 1129 KRKMYTW 1135


>emb|CAN64638.1| hypothetical protein VITISV_033929 [Vitis vinifera]
          Length = 865

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
 Frame = +2

Query: 5   QGNSVYRDTIYDTFIFRASEKSCEQTE---SVGLEMFDDLCPIDLRFDAPAKKLEHQGLK 175
           Q  S Y+D  +DT IF+  ++     E    VGLE+FDDL  ++L+FDAPA   E + L+
Sbjct: 774 QDTSGYKDERFDTLIFKKPKELLVDGEVETRVGLELFDDLSSVELKFDAPAMNFEAKELQ 833

Query: 176 AYNLLKRQMSK 208
           AY  LKRQ  K
Sbjct: 834 AYKALKRQFLK 844


>ref|XP_002317716.1| predicted protein [Populus trichocarpa] gi|222858389|gb|EEE95936.1|
           predicted protein [Populus trichocarpa]
          Length = 906

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/49 (55%), Positives = 33/49 (67%)
 Frame = +2

Query: 74  EQTESVGLEMFDDLCPIDLRFDAPAKKLEHQGLKAYNLLKRQMSKWQKK 220
           E+ E+  LE FDDLCPIDL+FDA   K   Q  K  NLLK+  SKWQ++
Sbjct: 839 EKVETFKLEFFDDLCPIDLKFDAREVKFSSQESKISNLLKKNFSKWQEE 887


>ref|XP_004166877.1| PREDICTED: uncharacterized LOC101205354 [Cucumis sativus]
          Length = 862

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
 Frame = +2

Query: 5   QGNSVYRDTIYDTFIFRASEKSCEQTES---VGLEMFDDLCPIDLRFDAPAKKLEHQGLK 175
           QGN      ++D+ IF+   K     +S      E+++ LCP++L F+AP      + LK
Sbjct: 777 QGNLTNCANVFDSLIFKLGGKEASSEKSQNNASRELYNGLCPVELEFNAPLMDFGSKELK 836

Query: 176 AYNLLKRQMSKWQ 214
           AY+LLKRQ+ KW+
Sbjct: 837 AYDLLKRQLLKWE 849


Top