BLASTX nr result

ID: Glycyrrhiza23_contig00019119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019119
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor...   184   1e-44
ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor...   181   7e-44
ref|XP_003592732.1| ATP-dependent RNA helicase DHX8 [Medicago tr...   163   2e-38
ref|XP_003589408.1| hypothetical protein MTR_1g023910 [Medicago ...   162   3e-38
gb|ADN33898.1| ATP-dependent RNA helicase [Cucumis melo subsp. m...   150   2e-34

>ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Glycine max]
          Length = 1197

 Score =  184 bits (467), Expect = 1e-44
 Identities = 100/135 (74%), Positives = 103/135 (76%)
 Frame = -3

Query: 491 MGAENPEDGLKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGRDSENVEEFDSKLKE 312
           M  ENPEDGLKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGR SENVEEFD KLKE
Sbjct: 1   MAVENPEDGLKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGRSSENVEEFDEKLKE 60

Query: 311 NGAEMPDYFVRTLLTIIHAILXXXXXXXXXXXXXXXXXXXXXXXXKALAIADDRDRVNEL 132
           NGAEMPDYFVRTLLTIIHAIL                        KALAIADDRDR  EL
Sbjct: 61  NGAEMPDYFVRTLLTIIHAIL---PPKPMDSKKEKDSVNGKTTKFKALAIADDRDRAKEL 117

Query: 131 QKEIETEANRKQKPK 87
           QKE+E+EA  KQKP+
Sbjct: 118 QKELESEAREKQKPE 132


>ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Glycine max]
          Length = 1203

 Score =  181 bits (460), Expect = 7e-44
 Identities = 98/135 (72%), Positives = 104/135 (77%)
 Frame = -3

Query: 491 MGAENPEDGLKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGRDSENVEEFDSKLKE 312
           M  +NPEDGLKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGR SENVEEFD+KLKE
Sbjct: 1   MAVDNPEDGLKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGRSSENVEEFDAKLKE 60

Query: 311 NGAEMPDYFVRTLLTIIHAILXXXXXXXXXXXXXXXXXXXXXXXXKALAIADDRDRVNEL 132
           NGAEMPDYFVRTLLTIIHAIL                        KALAIAD+RDR  EL
Sbjct: 61  NGAEMPDYFVRTLLTIIHAIL---PPKSKDSKKEKDSVSGKTTKFKALAIADNRDRAKEL 117

Query: 131 QKEIETEANRKQKPK 87
           QKE+E+EA  KQKP+
Sbjct: 118 QKELESEAREKQKPE 132


>ref|XP_003592732.1| ATP-dependent RNA helicase DHX8 [Medicago truncatula]
           gi|355481780|gb|AES62983.1| ATP-dependent RNA helicase
           DHX8 [Medicago truncatula]
          Length = 1154

 Score =  163 bits (413), Expect = 2e-38
 Identities = 91/131 (69%), Positives = 97/131 (74%)
 Frame = -3

Query: 485 AENPEDGLKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGRDSENVEEFDSKLKENG 306
           AE P+DGLKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELG  S +VEEFD+ LKENG
Sbjct: 4   AEIPQDGLKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGHSSNSVEEFDAILKENG 63

Query: 305 AEMPDYFVRTLLTIIHAILXXXXXXXXXXXXXXXXXXXXXXXXKALAIADDRDRVNELQK 126
           AEMPDYFVRTLLTIIHAIL                        KALAI+DDRDR  EL++
Sbjct: 64  AEMPDYFVRTLLTIIHAIL--PPNPKKEKENQNVKSSTSNTKFKALAISDDRDRAKELRE 121

Query: 125 EIETEANRKQK 93
           EIE EA  KQK
Sbjct: 122 EIEIEAREKQK 132


>ref|XP_003589408.1| hypothetical protein MTR_1g023910 [Medicago truncatula]
           gi|355478456|gb|AES59659.1| hypothetical protein
           MTR_1g023910 [Medicago truncatula]
          Length = 309

 Score =  162 bits (411), Expect = 3e-38
 Identities = 89/134 (66%), Positives = 99/134 (73%)
 Frame = -3

Query: 491 MGAENPEDGLKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGRDSENVEEFDSKLKE 312
           MG++ P+DGLKKLEYLSLVSKVCTELESHTGT DKVLAEFIT+LG  S +VEEFD+KLKE
Sbjct: 9   MGSDIPQDGLKKLEYLSLVSKVCTELESHTGTRDKVLAEFITDLGHSSNSVEEFDAKLKE 68

Query: 311 NGAEMPDYFVRTLLTIIHAILXXXXXXXXXXXXXXXXXXXXXXXXKALAIADDRDRVNEL 132
           NGAEMPDYFVRTLLTIIHAIL                        KALAI+DDR R  +L
Sbjct: 69  NGAEMPDYFVRTLLTIIHAIL---PPKPKKQRENLKENANSNTKFKALAISDDRGRAEKL 125

Query: 131 QKEIETEANRKQKP 90
           ++EIE EA  KQKP
Sbjct: 126 REEIEIEAREKQKP 139


>gb|ADN33898.1| ATP-dependent RNA helicase [Cucumis melo subsp. melo]
          Length = 953

 Score =  150 bits (379), Expect = 2e-34
 Identities = 79/127 (62%), Positives = 91/127 (71%)
 Frame = -3

Query: 479 NPEDGLKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGRDSENVEEFDSKLKENGAE 300
           N +DGLKKLEYLSLVSKVC+ELE+H G GDKVLAEFITE+GR  E V+EFD+KLKENGAE
Sbjct: 7   NGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAE 66

Query: 299 MPDYFVRTLLTIIHAILXXXXXXXXXXXXXXXXXXXXXXXXKALAIADDRDRVNELQKEI 120
           MPDYFVR+LL IIH IL                        +ALAI DDR+R  EL+KEI
Sbjct: 67  MPDYFVRSLLRIIHLILPPQKGDSEKELKKEKESDGKKGKFRALAIGDDRERAKELEKEI 126

Query: 119 ETEANRK 99
           E EA++K
Sbjct: 127 ELEAHQK 133


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