BLASTX nr result

ID: Glycyrrhiza23_contig00019056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019056
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522244.1| PREDICTED: F-box protein At3g54460-like [Gly...   349   2e-94
ref|XP_003539248.1| PREDICTED: F-box protein At3g54460-like [Gly...   348   3e-94
ref|XP_003598615.1| Chromatin remodeling complex subunit, partia...   336   1e-90
ref|XP_002266009.2| PREDICTED: F-box protein At3g54460-like [Vit...   278   4e-73
emb|CBI40154.3| unnamed protein product [Vitis vinifera]              278   4e-73

>ref|XP_003522244.1| PREDICTED: F-box protein At3g54460-like [Glycine max]
          Length = 1311

 Score =  349 bits (895), Expect = 2e-94
 Identities = 162/193 (83%), Positives = 179/193 (92%)
 Frame = -3

Query: 580 IQLWSGWQFPRSGSVAGAVFRHLSCDWDERSSMLSYPDHNRKTHGKDESIWNLSDCHVLG 401
           +Q+WSGWQFPRSG VAGA+F HLSCDW+ERSSMLSYPD+ +KTHG++ESIWNLSDCHVLG
Sbjct: 127 VQVWSGWQFPRSGPVAGAIFHHLSCDWNERSSMLSYPDYCKKTHGENESIWNLSDCHVLG 186

Query: 400 CKLHSRVSDSSRERLFELHEIFKTVPGVGKQHKFISSKIIPMDNTCRSGIWEISDDILTK 221
           CKLHSR  +SSR+RLFELHEIFKT+PGVGK+  F SSKI+PMDN CRSGIWE+SDDILTK
Sbjct: 187 CKLHSRGRNSSRKRLFELHEIFKTLPGVGKRQTFNSSKIMPMDNICRSGIWELSDDILTK 246

Query: 220 ILASLDPMDLTRVSATCHHLRSLAASVMPCTKLNLFPHQQAAVEWMLHRERNAELLPHPL 41
           ILASL PMDLTRVSATCHHLRSLAASVMP TKLNLFPHQ+ AVEWMLHRE+NAE LPHPL
Sbjct: 247 ILASLGPMDLTRVSATCHHLRSLAASVMPYTKLNLFPHQREAVEWMLHREQNAERLPHPL 306

Query: 40  YVALSTDDGFSFH 2
           +V LSTDDGFSFH
Sbjct: 307 FVVLSTDDGFSFH 319


>ref|XP_003539248.1| PREDICTED: F-box protein At3g54460-like [Glycine max]
          Length = 1329

 Score =  348 bits (894), Expect = 3e-94
 Identities = 164/193 (84%), Positives = 179/193 (92%)
 Frame = -3

Query: 580 IQLWSGWQFPRSGSVAGAVFRHLSCDWDERSSMLSYPDHNRKTHGKDESIWNLSDCHVLG 401
           +Q+WSGWQFPRSG VAGAVFRHLSCDW+ER SMLSYPD+ RKT+G +ESIWNLSDCHVLG
Sbjct: 131 VQVWSGWQFPRSGPVAGAVFRHLSCDWNERRSMLSYPDYCRKTYGANESIWNLSDCHVLG 190

Query: 400 CKLHSRVSDSSRERLFELHEIFKTVPGVGKQHKFISSKIIPMDNTCRSGIWEISDDILTK 221
           CKLHS VS+SSR+ LF+LHEIFK +PGVGK+  F SSKIIPMDN CRSGIWE+SDDILTK
Sbjct: 191 CKLHSGVSNSSRKILFQLHEIFKALPGVGKRQTFNSSKIIPMDNICRSGIWELSDDILTK 250

Query: 220 ILASLDPMDLTRVSATCHHLRSLAASVMPCTKLNLFPHQQAAVEWMLHRERNAELLPHPL 41
           ILASL PMDLTRVSATCHHLRSLAASVMP TKLNLFPHQ+ AVEWMLHRERNAELLPHPL
Sbjct: 251 ILASLGPMDLTRVSATCHHLRSLAASVMPYTKLNLFPHQRTAVEWMLHRERNAELLPHPL 310

Query: 40  YVALSTDDGFSFH 2
           +VALST+DGFSFH
Sbjct: 311 FVALSTEDGFSFH 323


>ref|XP_003598615.1| Chromatin remodeling complex subunit, partial [Medicago truncatula]
           gi|355487663|gb|AES68866.1| Chromatin remodeling complex
           subunit, partial [Medicago truncatula]
          Length = 651

 Score =  336 bits (862), Expect = 1e-90
 Identities = 165/196 (84%), Positives = 175/196 (89%), Gaps = 3/196 (1%)
 Frame = -3

Query: 580 IQLWS-GWQFPRSGSVAGAVFRHLSCDWDERSSMLSYPDHNRKTHGKDESIWNLSDCHVL 404
           + +WS GWQFP+SGSVAGAVFRHLSCDW+ERSSMLS PD+ RK HG++E IWNLSDCHVL
Sbjct: 132 VLVWSSGWQFPKSGSVAGAVFRHLSCDWNERSSMLSDPDYCRKIHGENECIWNLSDCHVL 191

Query: 403 GCKLHSRVSDSSRERLFELHEIFKTVPG--VGKQHKFISSKIIPMDNTCRSGIWEISDDI 230
           GCKLHS VS SSRERLFELHEIFKTVP   VG QH F  SKIIPMDNT RSGIW+ISDDI
Sbjct: 192 GCKLHSSVSGSSRERLFELHEIFKTVPSPCVGNQHNFNISKIIPMDNTGRSGIWDISDDI 251

Query: 229 LTKILASLDPMDLTRVSATCHHLRSLAASVMPCTKLNLFPHQQAAVEWMLHRERNAELLP 50
           L KIL SL P+DL RVSATCHHLRSLAASV+PCTKLNLFPHQQAAVEWML RERNAELLP
Sbjct: 252 LIKILYSLGPLDLNRVSATCHHLRSLAASVIPCTKLNLFPHQQAAVEWMLQRERNAELLP 311

Query: 49  HPLYVALSTDDGFSFH 2
           HPLYVALSTDDGFSFH
Sbjct: 312 HPLYVALSTDDGFSFH 327


>ref|XP_002266009.2| PREDICTED: F-box protein At3g54460-like [Vitis vinifera]
          Length = 1408

 Score =  278 bits (712), Expect = 4e-73
 Identities = 126/194 (64%), Positives = 158/194 (81%), Gaps = 1/194 (0%)
 Frame = -3

Query: 580 IQLWSGWQFPRSGSVAGAVFRHLSCDWDERSSML-SYPDHNRKTHGKDESIWNLSDCHVL 404
           I+LWSGWQFPRS S AGA+FRHLSCDW+ERSS+L ++ ++ +   G + S+WNLSDCHVL
Sbjct: 179 IELWSGWQFPRSASTAGALFRHLSCDWEERSSVLVNHEEYYKYNDGDNRSLWNLSDCHVL 238

Query: 403 GCKLHSRVSDSSRERLFELHEIFKTVPGVGKQHKFISSKIIPMDNTCRSGIWEISDDILT 224
           GCKLH    D S+++LFELHEIFK++P V  + +  SS++ P D +C+SGIWE+SDD+L 
Sbjct: 239 GCKLHCNALDPSKKKLFELHEIFKSLPSVAMKGQPDSSRVKPSDASCQSGIWEVSDDVLI 298

Query: 223 KILASLDPMDLTRVSATCHHLRSLAASVMPCTKLNLFPHQQAAVEWMLHRERNAELLPHP 44
            IL +L PMDL RVSATCHHLRSLAAS+MPC KL LFPHQ AAVEWML RERNAE+LPHP
Sbjct: 299 NILTALAPMDLVRVSATCHHLRSLAASIMPCMKLKLFPHQHAAVEWMLQRERNAEILPHP 358

Query: 43  LYVALSTDDGFSFH 2
           L++   T+DGF+F+
Sbjct: 359 LFIDFLTEDGFAFY 372


>emb|CBI40154.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score =  278 bits (712), Expect = 4e-73
 Identities = 126/194 (64%), Positives = 158/194 (81%), Gaps = 1/194 (0%)
 Frame = -3

Query: 580 IQLWSGWQFPRSGSVAGAVFRHLSCDWDERSSML-SYPDHNRKTHGKDESIWNLSDCHVL 404
           I+LWSGWQFPRS S AGA+FRHLSCDW+ERSS+L ++ ++ +   G + S+WNLSDCHVL
Sbjct: 127 IELWSGWQFPRSASTAGALFRHLSCDWEERSSVLVNHEEYYKYNDGDNRSLWNLSDCHVL 186

Query: 403 GCKLHSRVSDSSRERLFELHEIFKTVPGVGKQHKFISSKIIPMDNTCRSGIWEISDDILT 224
           GCKLH    D S+++LFELHEIFK++P V  + +  SS++ P D +C+SGIWE+SDD+L 
Sbjct: 187 GCKLHCNALDPSKKKLFELHEIFKSLPSVAMKGQPDSSRVKPSDASCQSGIWEVSDDVLI 246

Query: 223 KILASLDPMDLTRVSATCHHLRSLAASVMPCTKLNLFPHQQAAVEWMLHRERNAELLPHP 44
            IL +L PMDL RVSATCHHLRSLAAS+MPC KL LFPHQ AAVEWML RERNAE+LPHP
Sbjct: 247 NILTALAPMDLVRVSATCHHLRSLAASIMPCMKLKLFPHQHAAVEWMLQRERNAEILPHP 306

Query: 43  LYVALSTDDGFSFH 2
           L++   T+DGF+F+
Sbjct: 307 LFIDFLTEDGFAFY 320


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