BLASTX nr result

ID: Glycyrrhiza23_contig00019051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019051
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535140.1| PREDICTED: 50S ribosomal protein L12-2, chlo...   324   2e-86
gb|AFK35058.1| unknown [Medicago truncatula]                          318   2e-84
ref|NP_001238133.1| uncharacterized protein LOC100306392 [Glycin...   286   6e-75
ref|XP_002321601.1| predicted protein [Populus trichocarpa] gi|2...   253   7e-65
ref|XP_002282612.1| PREDICTED: 50S ribosomal protein L12, chloro...   252   1e-64

>ref|XP_003535140.1| PREDICTED: 50S ribosomal protein L12-2, chloroplastic-like [Glycine
           max]
          Length = 191

 Score =  324 bits (831), Expect = 2e-86
 Identities = 164/192 (85%), Positives = 176/192 (91%)
 Frame = +2

Query: 224 MRITTLSRYICRLPRPGAFGPLQTRAFQPDVVPRDSKASKPIKYKIPQFYDPYGPRPPPS 403
           MR   LSR ICRLPRP   GPLQ+RA Q D VP+D +A KPIKY+IPQFYDPYGPRPPPS
Sbjct: 1   MRFMPLSRLICRLPRPHTRGPLQSRALQSDSVPKDPQA-KPIKYRIPQFYDPYGPRPPPS 59

Query: 404 EKIIQLAERIGALSEEERGQIMPTLAERLKLPKLQPISTEGMDLGSEGGAAGPKIEEKKA 583
           EKI+QLAERIGALSEEERGQIMPTL+ERLKLPKLQPIST+GM +G+EGG AGPK+EEKKA
Sbjct: 60  EKIVQLAERIGALSEEERGQIMPTLSERLKLPKLQPISTDGMGMGTEGGTAGPKVEEKKA 119

Query: 584 EKTAFDVKLEKFDTAAKIKVIKEVRTFTNLGLKEAKDLVEKVPVVLKQGVTKEEANDIIE 763
           EKTAFDVKLEKFD AAKIKVIKEVR FTNLGLKEAKDLVEKVPVVLKQG+TKEEAN+IIE
Sbjct: 120 EKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVPVVLKQGITKEEANEIIE 179

Query: 764 KIKAAGGVAVME 799
           KIKAAGGVAVME
Sbjct: 180 KIKAAGGVAVME 191


>gb|AFK35058.1| unknown [Medicago truncatula]
          Length = 190

 Score =  318 bits (814), Expect = 2e-84
 Identities = 164/192 (85%), Positives = 175/192 (91%)
 Frame = +2

Query: 224 MRITTLSRYICRLPRPGAFGPLQTRAFQPDVVPRDSKASKPIKYKIPQFYDPYGPRPPPS 403
           MRI TLSRYI RLPRPG F PLQ+RAFQ D+  +DSKA KPIKYKIPQ YDPYGPRPPPS
Sbjct: 1   MRIATLSRYIRRLPRPGTFVPLQSRAFQTDI-SKDSKA-KPIKYKIPQSYDPYGPRPPPS 58

Query: 404 EKIIQLAERIGALSEEERGQIMPTLAERLKLPKLQPISTEGMDLGSEGGAAGPKIEEKKA 583
           +KI+QLAERI ALSEEERG I+P L+ERLKLPKLQPISTEGMDLGS+ GAAGPK+EEKKA
Sbjct: 59  DKIVQLAERIAALSEEERGHIIPALSERLKLPKLQPISTEGMDLGSDSGAAGPKVEEKKA 118

Query: 584 EKTAFDVKLEKFDTAAKIKVIKEVRTFTNLGLKEAKDLVEKVPVVLKQGVTKEEANDIIE 763
           EKTAFDVKLEKFDTA+KIKVIKEVR FTNLGLKEAKDLVEKVP VLKQGVTK+EAN IIE
Sbjct: 119 EKTAFDVKLEKFDTASKIKVIKEVRAFTNLGLKEAKDLVEKVPTVLKQGVTKDEANSIIE 178

Query: 764 KIKAAGGVAVME 799
           KIKA GGVAVME
Sbjct: 179 KIKAVGGVAVME 190


>ref|NP_001238133.1| uncharacterized protein LOC100306392 [Glycine max]
           gi|255628393|gb|ACU14541.1| unknown [Glycine max]
          Length = 181

 Score =  286 bits (732), Expect = 6e-75
 Identities = 151/182 (82%), Positives = 162/182 (89%), Gaps = 1/182 (0%)
 Frame = +2

Query: 224 MRITTLSRYICRLPRPGAFGPLQTRAFQPDVVPRDSKASKPIKYKIPQFYDPYGPRPPPS 403
           MR   LSR I RLPR    GPLQ+RA Q D V +D +A KPIKYKIPQFYDPYGPRPPPS
Sbjct: 1   MRFMPLSRLIFRLPRHYTHGPLQSRALQTDSVLKDPQA-KPIKYKIPQFYDPYGPRPPPS 59

Query: 404 EKIIQLAERIGALSEEERGQIMPTLAERLKLPKLQPISTEGMDLGSE-GGAAGPKIEEKK 580
           EKI+QLAE+I ALSEEERGQIMPTL+ERLKLPKLQPIST+GMD+G+E GGAAG K+EEKK
Sbjct: 60  EKIVQLAEQIEALSEEERGQIMPTLSERLKLPKLQPISTDGMDMGTEGGGAAGLKVEEKK 119

Query: 581 AEKTAFDVKLEKFDTAAKIKVIKEVRTFTNLGLKEAKDLVEKVPVVLKQGVTKEEANDII 760
           AEKTAFDVKLEKFD AAKIKVIKEVR FTNLGLKEAKDLVEKVPVVLKQGVTKEEAN+II
Sbjct: 120 AEKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVPVVLKQGVTKEEANEII 179

Query: 761 EK 766
           EK
Sbjct: 180 EK 181


>ref|XP_002321601.1| predicted protein [Populus trichocarpa] gi|222868597|gb|EEF05728.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  253 bits (645), Expect = 7e-65
 Identities = 142/198 (71%), Positives = 153/198 (77%), Gaps = 6/198 (3%)
 Frame = +2

Query: 224 MRITTLSRYICRLPRPGA---FGPLQTRAFQPDVVPRDSKASKPIKYKIPQFYDPYGPRP 394
           M+   L+R +C    P      GPLQ R FQ D VPRD K +KP KYK P +YDPYGPRP
Sbjct: 1   MKFIALARSVCA-HHPALREITGPLQVRYFQHDFVPRDPK-TKPKKYKYPLYYDPYGPRP 58

Query: 395 PPSEKIIQLAERIGALSEEERGQIMPTLAERLKLPKLQPISTEGMDLGSEGG---AAGPK 565
           PPSEKII++AERI AL  EER QI   L  +LK PKLQPISTEGM LGS+GG   A   K
Sbjct: 59  PPSEKIIEIAERIAALPPEERSQIGSALGYKLKHPKLQPISTEGMGLGSQGGEAAAGAAK 118

Query: 566 IEEKKAEKTAFDVKLEKFDTAAKIKVIKEVRTFTNLGLKEAKDLVEKVPVVLKQGVTKEE 745
           +EEKK EKTAFDVKLEKFD AAKIKVIKEVR FTNLGLKEAKDLVEKVP VLKQGVTK+E
Sbjct: 119 VEEKK-EKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVPCVLKQGVTKDE 177

Query: 746 ANDIIEKIKAAGGVAVME 799
           AN IIEKIKAAGGVAVME
Sbjct: 178 ANGIIEKIKAAGGVAVME 195


>ref|XP_002282612.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Vitis
           vinifera]
          Length = 193

 Score =  252 bits (644), Expect = 1e-64
 Identities = 137/194 (70%), Positives = 155/194 (79%), Gaps = 2/194 (1%)
 Frame = +2

Query: 224 MRITTLSRYICRLPR-PGAFGPLQTRAFQPDVVPRDSKASKPIKYKIPQFYDPYGPRPPP 400
           M+ T L + +   P  P   GPLQ+R FQ D VPR+  A KP +YK P FYDPYGP+PPP
Sbjct: 1   MKFTALVKTVRVHPTLPKIIGPLQSRFFQHDFVPREPNA-KPKRYKYPPFYDPYGPKPPP 59

Query: 401 SEKIIQLAERIGALSEEERGQIMPTLAERLKLPKLQPISTEGMDLGSEGGAA-GPKIEEK 577
           SEK++ LAERI AL+ EER QI P L +RL LPK Q ISTEGM+LGS+GGAA G    E+
Sbjct: 60  SEKVVGLAERIAALAPEERLQIGPMLKDRLSLPKTQVISTEGMELGSQGGAAAGAGKVEE 119

Query: 578 KAEKTAFDVKLEKFDTAAKIKVIKEVRTFTNLGLKEAKDLVEKVPVVLKQGVTKEEANDI 757
           K EKTAFDVKLEKF+ AAKIKVIKEVR FT+LGLKEAKDLVEKVPVV+KQG+TKEEANDI
Sbjct: 120 KVEKTAFDVKLEKFEAAAKIKVIKEVRAFTSLGLKEAKDLVEKVPVVIKQGITKEEANDI 179

Query: 758 IEKIKAAGGVAVME 799
           IEKIKAAGGVAVME
Sbjct: 180 IEKIKAAGGVAVME 193


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