BLASTX nr result

ID: Glycyrrhiza23_contig00019043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019043
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [...   173   2e-41
ref|XP_003627060.1| DNA repair protein radA-like protein [Medica...   173   2e-41
ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|2...   140   8e-32
ref|XP_003546961.1| PREDICTED: DNA repair protein RadA homolog [...   137   7e-31
emb|CBI36035.3| unnamed protein product [Vitis vinifera]              130   9e-29

>ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [Glycine max]
          Length = 560

 Score =  173 bits (438), Expect = 2e-41
 Identities = 85/92 (92%), Positives = 88/92 (95%)
 Frame = -3

Query: 295 AIAAAICSSCLELPIPNDIAFIGEIGLGGELRMVPRMEKRVYTVAKLGYRMCIVPKAAEK 116
           AIAAAICSSCLE+PIPNDIAFIGEIGLGGELRMVPRMEKRVYTVAKLGYRMCIVPK AEK
Sbjct: 469 AIAAAICSSCLEIPIPNDIAFIGEIGLGGELRMVPRMEKRVYTVAKLGYRMCIVPKVAEK 528

Query: 115 VLGTEGLEKMKVVGCRNLKEVINTIFPNIMMR 20
            LGTEGLEKM+VVGCRNLKEVINT+F NIM R
Sbjct: 529 ALGTEGLEKMEVVGCRNLKEVINTVFLNIMRR 560


>ref|XP_003627060.1| DNA repair protein radA-like protein [Medicago truncatula]
           gi|355521082|gb|AET01536.1| DNA repair protein radA-like
           protein [Medicago truncatula]
          Length = 643

 Score =  173 bits (438), Expect = 2e-41
 Identities = 84/93 (90%), Positives = 90/93 (96%)
 Frame = -3

Query: 295 AIAAAICSSCLELPIPNDIAFIGEIGLGGELRMVPRMEKRVYTVAKLGYRMCIVPKAAEK 116
           AIAAAICSSCLELPIPNDIAFIGEIGLGGELRMV RMEKRV+TVAKLGYRMCI+PKAAEK
Sbjct: 468 AIAAAICSSCLELPIPNDIAFIGEIGLGGELRMVTRMEKRVHTVAKLGYRMCIIPKAAEK 527

Query: 115 VLGTEGLEKMKVVGCRNLKEVINTIFPNIMMRR 17
           VLGTEGLE +KVVGCRNLK+VINTIFPN+M R+
Sbjct: 528 VLGTEGLENIKVVGCRNLKDVINTIFPNVMRRK 560


>ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|222847004|gb|EEE84551.1|
           predicted protein [Populus trichocarpa]
          Length = 525

 Score =  140 bits (354), Expect = 8e-32
 Identities = 67/86 (77%), Positives = 77/86 (89%)
 Frame = -3

Query: 295 AIAAAICSSCLELPIPNDIAFIGEIGLGGELRMVPRMEKRVYTVAKLGYRMCIVPKAAEK 116
           AIAAAICSS LE PIPN+IAFIGEIGLGGELR VPRMEKRV+TVAKLGY+MC++PK+AEK
Sbjct: 438 AIAAAICSSFLEFPIPNNIAFIGEIGLGGELRAVPRMEKRVHTVAKLGYKMCVIPKSAEK 497

Query: 115 VLGTEGLEKMKVVGCRNLKEVINTIF 38
            L   G + MK+VGC+NLKEVINT+F
Sbjct: 498 SLANLGFQGMKIVGCKNLKEVINTVF 523


>ref|XP_003546961.1| PREDICTED: DNA repair protein RadA homolog [Glycine max]
          Length = 585

 Score =  137 bits (346), Expect = 7e-31
 Identities = 68/86 (79%), Positives = 75/86 (87%)
 Frame = -3

Query: 295 AIAAAICSSCLELPIPNDIAFIGEIGLGGELRMVPRMEKRVYTVAKLGYRMCIVPKAAEK 116
           AIAAAICSS LE PIP   AFIGEIGLGGELRMVPR+EKRV T+ KLGYRMC+VPK AEK
Sbjct: 496 AIAAAICSSFLEFPIPEGTAFIGEIGLGGELRMVPRIEKRVNTLVKLGYRMCVVPKQAEK 555

Query: 115 VLGTEGLEKMKVVGCRNLKEVINTIF 38
           +L TEGL KMKVVGC++LKEVIN +F
Sbjct: 556 LLETEGLGKMKVVGCKDLKEVINAVF 581


>emb|CBI36035.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  130 bits (328), Expect = 9e-29
 Identities = 66/86 (76%), Positives = 73/86 (84%)
 Frame = -3

Query: 295 AIAAAICSSCLELPIPNDIAFIGEIGLGGELRMVPRMEKRVYTVAKLGYRMCIVPKAAEK 116
           A+AAAICSS LE PIPN IAFIGEIGLGGELR VPRMEKRV TVAKLGY+ CIVPKAAEK
Sbjct: 497 AVAAAICSSFLEFPIPNGIAFIGEIGLGGELRTVPRMEKRVNTVAKLGYKKCIVPKAAEK 556

Query: 115 VLGTEGLEKMKVVGCRNLKEVINTIF 38
            L T     +++VGCRN+KEVINT+F
Sbjct: 557 SLPTLEDMNIEIVGCRNMKEVINTVF 582