BLASTX nr result
ID: Glycyrrhiza23_contig00019043
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00019043 (297 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [... 173 2e-41 ref|XP_003627060.1| DNA repair protein radA-like protein [Medica... 173 2e-41 ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|2... 140 8e-32 ref|XP_003546961.1| PREDICTED: DNA repair protein RadA homolog [... 137 7e-31 emb|CBI36035.3| unnamed protein product [Vitis vinifera] 130 9e-29 >ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [Glycine max] Length = 560 Score = 173 bits (438), Expect = 2e-41 Identities = 85/92 (92%), Positives = 88/92 (95%) Frame = -3 Query: 295 AIAAAICSSCLELPIPNDIAFIGEIGLGGELRMVPRMEKRVYTVAKLGYRMCIVPKAAEK 116 AIAAAICSSCLE+PIPNDIAFIGEIGLGGELRMVPRMEKRVYTVAKLGYRMCIVPK AEK Sbjct: 469 AIAAAICSSCLEIPIPNDIAFIGEIGLGGELRMVPRMEKRVYTVAKLGYRMCIVPKVAEK 528 Query: 115 VLGTEGLEKMKVVGCRNLKEVINTIFPNIMMR 20 LGTEGLEKM+VVGCRNLKEVINT+F NIM R Sbjct: 529 ALGTEGLEKMEVVGCRNLKEVINTVFLNIMRR 560 >ref|XP_003627060.1| DNA repair protein radA-like protein [Medicago truncatula] gi|355521082|gb|AET01536.1| DNA repair protein radA-like protein [Medicago truncatula] Length = 643 Score = 173 bits (438), Expect = 2e-41 Identities = 84/93 (90%), Positives = 90/93 (96%) Frame = -3 Query: 295 AIAAAICSSCLELPIPNDIAFIGEIGLGGELRMVPRMEKRVYTVAKLGYRMCIVPKAAEK 116 AIAAAICSSCLELPIPNDIAFIGEIGLGGELRMV RMEKRV+TVAKLGYRMCI+PKAAEK Sbjct: 468 AIAAAICSSCLELPIPNDIAFIGEIGLGGELRMVTRMEKRVHTVAKLGYRMCIIPKAAEK 527 Query: 115 VLGTEGLEKMKVVGCRNLKEVINTIFPNIMMRR 17 VLGTEGLE +KVVGCRNLK+VINTIFPN+M R+ Sbjct: 528 VLGTEGLENIKVVGCRNLKDVINTIFPNVMRRK 560 >ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|222847004|gb|EEE84551.1| predicted protein [Populus trichocarpa] Length = 525 Score = 140 bits (354), Expect = 8e-32 Identities = 67/86 (77%), Positives = 77/86 (89%) Frame = -3 Query: 295 AIAAAICSSCLELPIPNDIAFIGEIGLGGELRMVPRMEKRVYTVAKLGYRMCIVPKAAEK 116 AIAAAICSS LE PIPN+IAFIGEIGLGGELR VPRMEKRV+TVAKLGY+MC++PK+AEK Sbjct: 438 AIAAAICSSFLEFPIPNNIAFIGEIGLGGELRAVPRMEKRVHTVAKLGYKMCVIPKSAEK 497 Query: 115 VLGTEGLEKMKVVGCRNLKEVINTIF 38 L G + MK+VGC+NLKEVINT+F Sbjct: 498 SLANLGFQGMKIVGCKNLKEVINTVF 523 >ref|XP_003546961.1| PREDICTED: DNA repair protein RadA homolog [Glycine max] Length = 585 Score = 137 bits (346), Expect = 7e-31 Identities = 68/86 (79%), Positives = 75/86 (87%) Frame = -3 Query: 295 AIAAAICSSCLELPIPNDIAFIGEIGLGGELRMVPRMEKRVYTVAKLGYRMCIVPKAAEK 116 AIAAAICSS LE PIP AFIGEIGLGGELRMVPR+EKRV T+ KLGYRMC+VPK AEK Sbjct: 496 AIAAAICSSFLEFPIPEGTAFIGEIGLGGELRMVPRIEKRVNTLVKLGYRMCVVPKQAEK 555 Query: 115 VLGTEGLEKMKVVGCRNLKEVINTIF 38 +L TEGL KMKVVGC++LKEVIN +F Sbjct: 556 LLETEGLGKMKVVGCKDLKEVINAVF 581 >emb|CBI36035.3| unnamed protein product [Vitis vinifera] Length = 583 Score = 130 bits (328), Expect = 9e-29 Identities = 66/86 (76%), Positives = 73/86 (84%) Frame = -3 Query: 295 AIAAAICSSCLELPIPNDIAFIGEIGLGGELRMVPRMEKRVYTVAKLGYRMCIVPKAAEK 116 A+AAAICSS LE PIPN IAFIGEIGLGGELR VPRMEKRV TVAKLGY+ CIVPKAAEK Sbjct: 497 AVAAAICSSFLEFPIPNGIAFIGEIGLGGELRTVPRMEKRVNTVAKLGYKKCIVPKAAEK 556 Query: 115 VLGTEGLEKMKVVGCRNLKEVINTIF 38 L T +++VGCRN+KEVINT+F Sbjct: 557 SLPTLEDMNIEIVGCRNMKEVINTVF 582