BLASTX nr result

ID: Glycyrrhiza23_contig00019042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019042
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637832.1| F-box protein [Medicago truncatula] gi|35550...   118   6e-25
ref|XP_003637820.1| F-box/kelch-repeat protein, partial [Medicag...   108   4e-22
ref|XP_003617891.1| F-box/WD-40 repeat-containing protein [Medic...   107   1e-21
ref|XP_003637809.1| F-box/kelch-repeat protein, partial [Medicag...   103   1e-20
ref|XP_003588454.1| F-box protein [Medicago truncatula] gi|35547...   103   2e-20

>ref|XP_003637832.1| F-box protein [Medicago truncatula] gi|355503767|gb|AES84970.1|
           F-box protein [Medicago truncatula]
          Length = 392

 Score =  118 bits (295), Expect = 6e-25
 Identities = 65/108 (60%), Positives = 73/108 (67%)
 Frame = +1

Query: 10  NHIPDDLAFSILSKLPPKSLKRFGSVCKSWGLLSENPHFMSMYCNHFISSDHPXXXXXXX 189
           N+I DDLAFSILSKLP KSLKRF  V KSW  L ENP+FM+MY N+FISS +        
Sbjct: 15  NYIHDDLAFSILSKLPLKSLKRFSCVRKSWSRLFENPNFMNMYRNYFISSTY-------- 66

Query: 190 XXXXXXIPAMSGEPVHRELYLLFGERFESRVKLDWPPPFQEKDDNIVI 333
                  P +    VH  LYLLFGERFE++VKLDWPPPFQE  DNI I
Sbjct: 67  -EEDGSYPVLMRRMVHHVLYLLFGERFENKVKLDWPPPFQE--DNIGI 111


>ref|XP_003637820.1| F-box/kelch-repeat protein, partial [Medicago truncatula]
           gi|355503755|gb|AES84958.1| F-box/kelch-repeat protein,
           partial [Medicago truncatula]
          Length = 209

 Score =  108 bits (270), Expect = 4e-22
 Identities = 62/108 (57%), Positives = 72/108 (66%)
 Frame = +1

Query: 10  NHIPDDLAFSILSKLPPKSLKRFGSVCKSWGLLSENPHFMSMYCNHFISSDHPXXXXXXX 189
           NHI DDLAFSILSKLP KSLKRF  V KSW  L EN +F++MY N+FISS +        
Sbjct: 15  NHIHDDLAFSILSKLPLKSLKRFSCVRKSWSCLFENSNFLNMYRNYFISSTY--EEDGPC 72

Query: 190 XXXXXXIPAMSGEPVHRELYLLFGERFESRVKLDWPPPFQEKDDNIVI 333
                 +P +   P    LYLLFGERFE++VKL+WPPPFQE  DNI I
Sbjct: 73  LLLQQTLPYL---PNLHVLYLLFGERFENKVKLNWPPPFQE--DNIAI 115


>ref|XP_003617891.1| F-box/WD-40 repeat-containing protein [Medicago truncatula]
           gi|355519226|gb|AET00850.1| F-box/WD-40
           repeat-containing protein [Medicago truncatula]
          Length = 474

 Score =  107 bits (267), Expect = 1e-21
 Identities = 55/107 (51%), Positives = 65/107 (60%)
 Frame = +1

Query: 13  HIPDDLAFSILSKLPPKSLKRFGSVCKSWGLLSENPHFMSMYCNHFISSDHPXXXXXXXX 192
           ++P DL   ILSKLP KSLKRF  VCKSW LL ENP+F+ MYCN+ + +DH         
Sbjct: 17  NLPHDLVLFILSKLPLKSLKRFICVCKSWSLLFENPNFIKMYCNNILCNDHSDYDDTFLI 76

Query: 193 XXXXXIPAMSGEPVHRELYLLFGERFESRVKLDWPPPFQEKDDNIVI 333
                     G+  H E YLL  ER E+RVKLDWPP FQE D NI +
Sbjct: 77  LHKLPFNYYHGQ--HCEFYLLSSERLENRVKLDWPPQFQEIDTNIYV 121


>ref|XP_003637809.1| F-box/kelch-repeat protein, partial [Medicago truncatula]
           gi|355503744|gb|AES84947.1| F-box/kelch-repeat protein,
           partial [Medicago truncatula]
          Length = 209

 Score =  103 bits (258), Expect = 1e-20
 Identities = 60/108 (55%), Positives = 69/108 (63%)
 Frame = +1

Query: 10  NHIPDDLAFSILSKLPPKSLKRFGSVCKSWGLLSENPHFMSMYCNHFISSDHPXXXXXXX 189
           NHI DDLAF ILSKLP KS KRF  V KSW  L ENP+F++MY  +FISS +        
Sbjct: 15  NHIHDDLAFFILSKLPLKSSKRFSCVRKSWSHLFENPNFINMYRKYFISSTY--EEDGSS 72

Query: 190 XXXXXXIPAMSGEPVHRELYLLFGERFESRVKLDWPPPFQEKDDNIVI 333
                 +P +   P    LYLLFGERFE++VK DWPPPFQE  DNI I
Sbjct: 73  LLLQQTLPYL---PNLHVLYLLFGERFENKVKFDWPPPFQE--DNIAI 115


>ref|XP_003588454.1| F-box protein [Medicago truncatula] gi|355477502|gb|AES58705.1|
           F-box protein [Medicago truncatula]
          Length = 403

 Score =  103 bits (256), Expect = 2e-20
 Identities = 56/109 (51%), Positives = 70/109 (64%)
 Frame = +1

Query: 7   HNHIPDDLAFSILSKLPPKSLKRFGSVCKSWGLLSENPHFMSMYCNHFISSDHPXXXXXX 186
           + HIP+DL F +LSKLP KSLKRFG V KS+ LL ENP+FM+MYCN+FIS+         
Sbjct: 19  NKHIPNDLIFFVLSKLPLKSLKRFGCVSKSYALLFENPNFMNMYCNNFISNSPSYCDDTC 78

Query: 187 XXXXXXXIPAMSGEPVHRELYLLFGERFESRVKLDWPPPFQEKDDNIVI 333
                   P  + E  H  +YLL GERFE+ VK+D PPPF + D +I I
Sbjct: 79  LLLQEIISPNSTEE--HSVMYLLSGERFENVVKIDLPPPFCKDDYDIHI 125


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