BLASTX nr result
ID: Glycyrrhiza23_contig00019041
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00019041
(1937 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi... 842 0.0
ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago trunca... 829 0.0
ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago trunca... 828 0.0
gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK... 826 0.0
gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucum... 691 0.0
>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Glycine
max]
Length = 548
Score = 842 bits (2175), Expect = 0.0
Identities = 423/509 (83%), Positives = 458/509 (89%), Gaps = 3/509 (0%)
Frame = +1
Query: 43 VAAEEPETKKLKMSTTTSDDEECATATGTKIRYKRRKIAIFFAYCGVGYQGMQKNPGAKT 222
V+AEEPE KKLKMSTTTSDDEE TGTK RYKRRK+AIFFAYCGVGYQGMQKNPGAKT
Sbjct: 19 VSAEEPEPKKLKMSTTTSDDEE----TGTKKRYKRRKVAIFFAYCGVGYQGMQKNPGAKT 74
Query: 223 IEGDLEEALYASGAVPEQDRGNPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDRL 402
IEGDLEEALY SGAVPEQDRG PKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDRL
Sbjct: 75 IEGDLEEALYVSGAVPEQDRGVPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDRL 134
Query: 403 NSNLPLQIRIFGYKRATASFNAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSENE 582
NSNLP QIRIFGYKR TASFNAKKFCDRRRYVYLIPVFALDP CHRDRETV+ASLGS NE
Sbjct: 135 NSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRETVMASLGSGNE 194
Query: 583 LVKCLECSERGRKVVGLVGNGRRNLELEAADVVAGISSNQND---VDVEGSLSKGDYNHL 753
LVKCLECSERGRKVVGLVGN ++NLELEA DV AGISSN++ DVE SLSKGD NHL
Sbjct: 195 LVKCLECSERGRKVVGLVGNRKQNLELEAVDVEAGISSNRDSGVTEDVEVSLSKGDDNHL 254
Query: 754 NEESSNDNEGKVSVDDIKTGLETIVSCQDDSTPLNGGSVNNSGILEEEKLNGEDKPTEGS 933
NEES NDN+G + + KTGLET++ Q++ TPLNG SVNNS ILEEEK+NGEDKPT GS
Sbjct: 255 NEESGNDNKGGM---NCKTGLETVIPVQEEGTPLNGESVNNSDILEEEKVNGEDKPTNGS 311
Query: 934 EFCYGEKERERFNKILKYYVGTHNFHNFTTRTKAEDPAARRFIISFDANTTLVVEGMEFV 1113
FCYGEKERERFNKILK +VGTHNFHNFTTRTKAEDPAARR+IISF+ANTTLVVEG+EFV
Sbjct: 312 RFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYIISFNANTTLVVEGVEFV 371
Query: 1114 KCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIAKALQKDVSINVPTAPEVGLYLDECF 1293
KCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLI +ALQ+DV+INVPTAPEVGLYLDECF
Sbjct: 372 KCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNINVPTAPEVGLYLDECF 431
Query: 1294 FSSYNQKWKDSHEELSMKAYEKEAEDFKIKYIYSHIASTEQKDGTVALWLHSLNHRNYPD 1473
F+SYNQKWKD HEELSMKAYEKEA++FK+KYIYSHIASTEQK+GTVALWLHSLNHRNYPD
Sbjct: 432 FTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTEQKEGTVALWLHSLNHRNYPD 490
Query: 1474 LRIVDEEGVINDKISETDLTCRDQVNGFP 1560
LR+++EE + N+K ++ D + P
Sbjct: 491 LRVINEEAIPNNKSADPKEAITDNKSADP 519
>ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511415|gb|AES92557.1| tRNA pseudouridine synthase
[Medicago truncatula] gi|388510220|gb|AFK43176.1| unknown
[Medicago truncatula]
Length = 530
Score = 829 bits (2141), Expect = 0.0
Identities = 412/501 (82%), Positives = 446/501 (89%), Gaps = 7/501 (1%)
Frame = +1
Query: 49 AEEPETKKLKMSTTTSDDEECATATGTKIRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIE 228
AEEP TKK+KMSTTTSDDE C TA G+K+RYKRRK+AIFFAYCGVGYQGMQKNPGAKTIE
Sbjct: 21 AEEPATKKVKMSTTTSDDEGCTTAEGSKVRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIE 80
Query: 229 GDLEEALYASGAVPEQDRGNPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNS 408
G+LEEALY SGAVPEQDRG KRYDWARSARTDKGVSAVGQVVSGRFYIDPPG VDRLNS
Sbjct: 81 GELEEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNS 140
Query: 409 NLPLQIRIFGYKRATASFNAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSENELV 588
NLP QIRIFG+KR TASF+AKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSENELV
Sbjct: 141 NLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSENELV 200
Query: 589 KCLECSERGRKVVGLVGNGRRNLELEAADVVAGISSNQNDV-------DVEGSLSKGDYN 747
KCL CSERGRKV G+VGN +RNLELEA DV G SSN+NDV DVE SLSKGD N
Sbjct: 201 KCLPCSERGRKVEGVVGNSKRNLELEAVDVENG-SSNKNDVVDSGVTKDVEVSLSKGDDN 259
Query: 748 HLNEESSNDNEGKVSVDDIKTGLETIVSCQDDSTPLNGGSVNNSGILEEEKLNGEDKPTE 927
HLN+ES NDNEGKVSV+++ + +T+VS QD+ P+NGGS NN GILEEEK+N ED
Sbjct: 260 HLNKESINDNEGKVSVEEVNS--KTVVSDQDEVAPINGGSENNLGILEEEKVNREDTAAN 317
Query: 928 GSEFCYGEKERERFNKILKYYVGTHNFHNFTTRTKAEDPAARRFIISFDANTTLVVEGME 1107
GS FCYGEKERERFN ILK YVGTHNFHNFTTR K EDP+A+RFIISFDA+TT+VVEGME
Sbjct: 318 GSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPSAKRFIISFDASTTVVVEGME 377
Query: 1108 FVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIAKALQKDVSINVPTAPEVGLYLDE 1287
FVKCE+VGQSFMLHQIRKM+GLAVAIMRNCAPESLI KALQKDVSI VPTAPEVGLYLDE
Sbjct: 378 FVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLYLDE 437
Query: 1288 CFFSSYNQKWKDSHEELSMKAYEKEAEDFKIKYIYSHIASTEQKDGTVALWLHSLNHRNY 1467
CFF+SYNQKWKD+HEE+SMKAYEKEAEDFK++YIY HIASTE K+GTV LWLHSLNHRNY
Sbjct: 438 CFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHSLNHRNY 497
Query: 1468 PDLRIVDEEGVINDKISETDL 1530
PDLRI+D EGV NDK E D+
Sbjct: 498 PDLRILDGEGVTNDKKVEVDM 518
>ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511411|gb|AES92553.1| tRNA pseudouridine synthase
[Medicago truncatula]
Length = 530
Score = 828 bits (2138), Expect = 0.0
Identities = 411/501 (82%), Positives = 446/501 (89%), Gaps = 7/501 (1%)
Frame = +1
Query: 49 AEEPETKKLKMSTTTSDDEECATATGTKIRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIE 228
AEEP TKK+KMSTTTSDDE C TA G+K+RYKRRK+AIFFAYCGVGYQGMQKNPGAKTIE
Sbjct: 21 AEEPATKKVKMSTTTSDDEGCTTAEGSKVRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIE 80
Query: 229 GDLEEALYASGAVPEQDRGNPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNS 408
G+LEEALY SGAVPEQDRG KRYDWARSARTDKGVSAVGQVVSGRFYIDPPG VDRLNS
Sbjct: 81 GELEEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNS 140
Query: 409 NLPLQIRIFGYKRATASFNAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSENELV 588
NLP QIRIFG+KR TASF+AKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSENELV
Sbjct: 141 NLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSENELV 200
Query: 589 KCLECSERGRKVVGLVGNGRRNLELEAADVVAGISSNQNDV-------DVEGSLSKGDYN 747
KCL CSERGRKV G+VGN +RNLELEA DV G SSN+NDV DVE SLSKGD N
Sbjct: 201 KCLPCSERGRKVEGVVGNSKRNLELEAVDVENG-SSNKNDVVDSGVTKDVEVSLSKGDDN 259
Query: 748 HLNEESSNDNEGKVSVDDIKTGLETIVSCQDDSTPLNGGSVNNSGILEEEKLNGEDKPTE 927
HLN+ES NDNEGKVSV+++ + +T+VS +D+ P+NGGS NN GILEEEK+N ED
Sbjct: 260 HLNKESINDNEGKVSVEEVNS--KTVVSDEDEVAPINGGSENNLGILEEEKVNREDTAAN 317
Query: 928 GSEFCYGEKERERFNKILKYYVGTHNFHNFTTRTKAEDPAARRFIISFDANTTLVVEGME 1107
GS FCYGEKERERFN ILK YVGTHNFHNFTTR K EDP+A+RFIISFDA+TT+VVEGME
Sbjct: 318 GSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPSAKRFIISFDASTTVVVEGME 377
Query: 1108 FVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIAKALQKDVSINVPTAPEVGLYLDE 1287
FVKCE+VGQSFMLHQIRKM+GLAVAIMRNCAPESLI KALQKDVSI VPTAPEVGLYLDE
Sbjct: 378 FVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLYLDE 437
Query: 1288 CFFSSYNQKWKDSHEELSMKAYEKEAEDFKIKYIYSHIASTEQKDGTVALWLHSLNHRNY 1467
CFF+SYNQKWKD+HEE+SMKAYEKEAEDFK++YIY HIASTE K+GTV LWLHSLNHRNY
Sbjct: 438 CFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHSLNHRNY 497
Query: 1468 PDLRIVDEEGVINDKISETDL 1530
PDLRI+D EGV NDK E D+
Sbjct: 498 PDLRILDGEGVTNDKKVEVDM 518
>gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK33588.1| unknown
[Medicago truncatula]
Length = 530
Score = 826 bits (2134), Expect = 0.0
Identities = 411/501 (82%), Positives = 445/501 (88%), Gaps = 7/501 (1%)
Frame = +1
Query: 49 AEEPETKKLKMSTTTSDDEECATATGTKIRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIE 228
AEEP TKK+KMSTTTSDDE C TA G+K+RYKRRK+AIFFAYCGVGYQGMQKNPGAKTIE
Sbjct: 21 AEEPATKKVKMSTTTSDDEGCTTAEGSKVRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIE 80
Query: 229 GDLEEALYASGAVPEQDRGNPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNS 408
G+LEEALY SGAVPEQDRG KRYDWARSARTDKGVSAVGQVVSGRFYIDPPG VDRLNS
Sbjct: 81 GELEEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNS 140
Query: 409 NLPLQIRIFGYKRATASFNAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSENELV 588
NLP QIRIFG+KR TASF+AKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSENELV
Sbjct: 141 NLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSENELV 200
Query: 589 KCLECSERGRKVVGLVGNGRRNLELEAADVVAGISSNQNDV-------DVEGSLSKGDYN 747
KCL CSERGRKV G+VGN +RNLELEA DV G SSN+NDV DVE SLSKGD N
Sbjct: 201 KCLPCSERGRKVEGVVGNSKRNLELEAVDVENG-SSNKNDVVDSGVTKDVEVSLSKGDDN 259
Query: 748 HLNEESSNDNEGKVSVDDIKTGLETIVSCQDDSTPLNGGSVNNSGILEEEKLNGEDKPTE 927
HLN+ES NDNEGKVSV+++ + +T+VS QD+ P+NGGS NN GILEEEK+N ED
Sbjct: 260 HLNKESINDNEGKVSVEEVNS--KTVVSDQDEVAPINGGSENNLGILEEEKVNREDTAAN 317
Query: 928 GSEFCYGEKERERFNKILKYYVGTHNFHNFTTRTKAEDPAARRFIISFDANTTLVVEGME 1107
GS FCYGEKERERFN ILK YVGTHNFHNFTTR K EDP+A+RFIISFDA+TT+VVEGME
Sbjct: 318 GSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPSAKRFIISFDASTTVVVEGME 377
Query: 1108 FVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIAKALQKDVSINVPTAPEVGLYLDE 1287
FVKCE+VGQSFMLHQIRKM+GLAVAIMRNCAPESLI KALQKDVSI VPTAPEVGLYLDE
Sbjct: 378 FVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLYLDE 437
Query: 1288 CFFSSYNQKWKDSHEELSMKAYEKEAEDFKIKYIYSHIASTEQKDGTVALWLHSLNHRNY 1467
CFF+SYNQKWKD+HEE+SMKAYEKEAEDFK++YIY HIASTE K+GTV LWLHSLNHRNY
Sbjct: 438 CFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHSLNHRNY 497
Query: 1468 PDLRIVDEEGVINDKISETDL 1530
PDL I+D EGV NDK E D+
Sbjct: 498 PDLGILDGEGVTNDKKVEVDM 518
>gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucumis melo subsp. melo]
Length = 519
Score = 691 bits (1782), Expect = 0.0
Identities = 356/492 (72%), Positives = 408/492 (82%), Gaps = 8/492 (1%)
Frame = +1
Query: 40 QVAAEEPETKKLKMS--TTTSDDEECAT--ATGTKIRYKRRKIAIFFAYCGVGYQGMQKN 207
Q EEP+ KKLKMS TTTSDDE+ + A K RYKRRK+AIFFAYCGVGYQGMQKN
Sbjct: 15 QPLIEEPDPKKLKMSSTTTTSDDEDVNSNSAAPKKQRYKRRKVAIFFAYCGVGYQGMQKN 74
Query: 208 PGAKTIEGDLEEALYASGAVPEQDRGNPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPG 387
PGAKTIE DLEEALY +GAVPEQDRG KRYDWARSARTDKGVSAVGQVVSGRFYIDPPG
Sbjct: 75 PGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPG 134
Query: 388 LVDRLNSNLPLQIRIFGYKRATASFNAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASL 567
VDRLNSNL QIRIFGYKR TASFNAKKFCDRRRYVYLIPVFALDP CHRDRE+V ASL
Sbjct: 135 FVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASL 194
Query: 568 GSENELVKCLECSERGRKVVGLVGNGRRNLELEAADVVAGISSN-QNDVDVEGSLSKGDY 744
GS+NELVKCLECSERGRKV GL+G +RN E++ A + ISSN N ++V + G
Sbjct: 195 GSDNELVKCLECSERGRKVEGLMG--KRNFEVKTAITESDISSNIVNAIEVSDVQANGVL 252
Query: 745 NHLNEESSNDNEGKVSVDDIKTGLETIVS---CQDDSTPLNGGSVNNSGILEEEKLNGED 915
S ++ + V V++ T L T+ S + +S+ ++G ++ ++ +E +NG++
Sbjct: 253 EDSATTSDSNKQTSVLVENTATEL-TVASEGIAKSESSEMSGLGNDSEIVVSKESVNGKE 311
Query: 916 KPTEGSEFCYGEKERERFNKILKYYVGTHNFHNFTTRTKAEDPAARRFIISFDANTTLVV 1095
KP+ F YGE+E+ RFN+ILK+YVGTHNFHNFTTRTKAEDPAARRFI+SFDA+TT+VV
Sbjct: 312 KPS--GSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAEDPAARRFIVSFDASTTVVV 369
Query: 1096 EGMEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIAKALQKDVSINVPTAPEVGL 1275
EG+EFVKCEVVGQSFMLHQIRKM+GLAVAIMRNCAPESLI KALQKDV+INVPTAPEVGL
Sbjct: 370 EGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPEVGL 429
Query: 1276 YLDECFFSSYNQKWKDSHEELSMKAYEKEAEDFKIKYIYSHIASTEQKDGTVALWLHSLN 1455
YLDEC F+SYNQKWKD+HEE+SMKAYE+ AEDFK+K IYSHIASTE KDG VALWLHSLN
Sbjct: 430 YLDECLFTSYNQKWKDTHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLN 489
Query: 1456 HRNYPDLRIVDE 1491
HRNYPDLR++DE
Sbjct: 490 HRNYPDLRVIDE 501