BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019028
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal doma...   402   e-110
ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal doma...   399   e-109
ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal doma...   392   e-107
ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal doma...   391   e-106
ref|XP_004134718.1| PREDICTED: RNA polymerase II C-terminal doma...   357   2e-96

>ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 958

 Score =  402 bits (1032), Expect = e-110
 Identities = 204/251 (81%), Positives = 226/251 (90%), Gaps = 4/251 (1%)
 Frame = -2

Query: 742 KLVVVYYGEMVLGEVDVYGDEDKWKKDLLNMKEIRITHFSQPSERCPPLAVLHTITS-GV 566
           K  +VY+GEM +GEV++Y +E K     +++KEIRI+HFSQPSERCPPLAVLHTITS G+
Sbjct: 2   KRSMVYHGEMEVGEVEIYPEEKK----NIDLKEIRISHFSQPSERCPPLAVLHTITSFGI 57

Query: 565 CFKMES---KTQQQQDALSHLHASCITENKTAVMPLCGEEIHLVAMYSRNNDRPCFWGFV 395
           CFKMES   +T+QQQD L HLH+SCI ENKTAVMPL GEEIHLVAMYSRNNDRPCFWGF+
Sbjct: 58  CFKMESSTSQTRQQQDVLFHLHSSCIRENKTAVMPLRGEEIHLVAMYSRNNDRPCFWGFI 117

Query: 394 VASGLYNSCLVMLNLRCLSIVFDLDETLVVANTLRSFEDRIEALHRKINSEVDPQRISGM 215
           VASGLYNSCL MLNLRCL IVFDLDETLVVANT+RSFED+IE LHRK+NSEV+PQRIS M
Sbjct: 118 VASGLYNSCLTMLNLRCLGIVFDLDETLVVANTMRSFEDKIEVLHRKMNSEVNPQRISTM 177

Query: 214 QAEIKRYLYDKSILKQYAETDQVVDNGKVIRIQSEIVPALSDSHQPIVRPLIRLPEKNII 35
           QAEIKRYL DK+ILK+YAE DQVVDNGKVI+IQSEIVPALSDSHQPIVRPLIRL EKNII
Sbjct: 178 QAEIKRYLDDKNILKEYAENDQVVDNGKVIKIQSEIVPALSDSHQPIVRPLIRLQEKNII 237

Query: 34  LTRINPQIRDT 2
           LTRINPQIRDT
Sbjct: 238 LTRINPQIRDT 248


>ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 960

 Score =  399 bits (1024), Expect = e-109
 Identities = 201/248 (81%), Positives = 224/248 (90%), Gaps = 4/248 (1%)
 Frame = -2

Query: 733 VVYYGEMVLGEVDVYGDEDKWKKDLLNMKEIRITHFSQPSERCPPLAVLHTITS-GVCFK 557
           +VY+GEM +GEV +Y +E+K     +++KEIRI+HFSQPSERCPPLAVLHTITS G+CFK
Sbjct: 5   MVYHGEMAVGEVKIYPEENK----NMDLKEIRISHFSQPSERCPPLAVLHTITSFGICFK 60

Query: 556 MESKT---QQQQDALSHLHASCITENKTAVMPLCGEEIHLVAMYSRNNDRPCFWGFVVAS 386
           MES T   +QQQDAL HLH+SCI ENKTAVMP+ GEEIHLVAMYSRNNDRPCFWGF+VAS
Sbjct: 61  MESSTSQKRQQQDALFHLHSSCIRENKTAVMPVRGEEIHLVAMYSRNNDRPCFWGFIVAS 120

Query: 385 GLYNSCLVMLNLRCLSIVFDLDETLVVANTLRSFEDRIEALHRKINSEVDPQRISGMQAE 206
           GLYNSCL MLNLRCL IVFDLDETLVVANT+RSFED+IE LHRK+NSEV+PQ+IS MQAE
Sbjct: 121 GLYNSCLTMLNLRCLGIVFDLDETLVVANTMRSFEDKIEVLHRKMNSEVNPQQISAMQAE 180

Query: 205 IKRYLYDKSILKQYAETDQVVDNGKVIRIQSEIVPALSDSHQPIVRPLIRLPEKNIILTR 26
           IKRYL DK+ILK+YAE DQVVDNGKVI+IQSE VPALSDSHQPIVRPLIRL EKNIILTR
Sbjct: 181 IKRYLDDKNILKEYAENDQVVDNGKVIKIQSESVPALSDSHQPIVRPLIRLQEKNIILTR 240

Query: 25  INPQIRDT 2
           INPQIRDT
Sbjct: 241 INPQIRDT 248


>ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 954

 Score =  392 bits (1008), Expect = e-107
 Identities = 200/245 (81%), Positives = 222/245 (90%), Gaps = 1/245 (0%)
 Frame = -2

Query: 733 VVYYGEMVLGEVDVYGDEDKWKKDLLNMKEIRITHFSQPSERCPPLAVLHTITS-GVCFK 557
           VVY GE+V+GEVDVY +E+   K+  ++KEIRI+HFSQPSERCPPLAVLHT+TS GVCFK
Sbjct: 5   VVYQGEVVVGEVDVYPEENNNYKNF-HVKEIRISHFSQPSERCPPLAVLHTVTSCGVCFK 63

Query: 556 MESKTQQQQDALSHLHASCITENKTAVMPLCGEEIHLVAMYSRNNDRPCFWGFVVASGLY 377
           MESKTQQQ D L  LH+ CI ENKTAVMPL GEEIHLVAM+SRN DRPCFWGF+VA GLY
Sbjct: 64  MESKTQQQ-DGLFQLHSLCIRENKTAVMPLGGEEIHLVAMHSRNVDRPCFWGFIVALGLY 122

Query: 376 NSCLVMLNLRCLSIVFDLDETLVVANTLRSFEDRIEALHRKINSEVDPQRISGMQAEIKR 197
           +SCLVMLNLRCL IVFDLDETL+VANT+RSFEDRI+AL RKINSEVDPQRISGMQAE+KR
Sbjct: 123 DSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINSEVDPQRISGMQAEVKR 182

Query: 196 YLYDKSILKQYAETDQVVDNGKVIRIQSEIVPALSDSHQPIVRPLIRLPEKNIILTRINP 17
           Y  DK+ILKQYAE DQVVDNG+VI++QSEIVPALSDSHQPIVRPLIRL +KNIILTRINP
Sbjct: 183 YQDDKNILKQYAENDQVVDNGRVIKVQSEIVPALSDSHQPIVRPLIRLQDKNIILTRINP 242

Query: 16  QIRDT 2
           QIRDT
Sbjct: 243 QIRDT 247


>ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 960

 Score =  391 bits (1005), Expect = e-106
 Identities = 199/250 (79%), Positives = 222/250 (88%), Gaps = 6/250 (2%)
 Frame = -2

Query: 733 VVYYGEMVLGEVDVYGDEDKWKKDL-----LNMKEIRITHFSQPSERCPPLAVLHTITS- 572
           VVY GE+V+GEVDVY +E+    +       ++KEIRI+HFSQPSERCPPLAVLHT+TS 
Sbjct: 5   VVYQGEVVVGEVDVYPEENNNNNNKNYNKNFHVKEIRISHFSQPSERCPPLAVLHTVTSC 64

Query: 571 GVCFKMESKTQQQQDALSHLHASCITENKTAVMPLCGEEIHLVAMYSRNNDRPCFWGFVV 392
           GVCFKMESKTQQQ D L  LH+ CI ENKTAVMPL GEEIHLVAM+SRN+DRPCFWGF+V
Sbjct: 65  GVCFKMESKTQQQ-DGLFQLHSLCIRENKTAVMPLGGEEIHLVAMHSRNDDRPCFWGFIV 123

Query: 391 ASGLYNSCLVMLNLRCLSIVFDLDETLVVANTLRSFEDRIEALHRKINSEVDPQRISGMQ 212
             GLY+SCLVMLNLRCL IVFDLDETL+VANT+RSFEDRI+AL RKINSEVDPQRISGMQ
Sbjct: 124 TLGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINSEVDPQRISGMQ 183

Query: 211 AEIKRYLYDKSILKQYAETDQVVDNGKVIRIQSEIVPALSDSHQPIVRPLIRLPEKNIIL 32
           AE+KRYL DK+ILKQYAE DQVVDNG+VI++QSEIVPALSDSHQPIVRPLIRL +KNIIL
Sbjct: 184 AEVKRYLDDKNILKQYAENDQVVDNGRVIKVQSEIVPALSDSHQPIVRPLIRLQDKNIIL 243

Query: 31  TRINPQIRDT 2
           TRINPQIRDT
Sbjct: 244 TRINPQIRDT 253


>ref|XP_004134718.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Cucumis sativus]
           gi|449479317|ref|XP_004155567.1| PREDICTED: LOW QUALITY
           PROTEIN: RNA polymerase II C-terminal domain
           phosphatase-like 1-like [Cucumis sativus]
          Length = 803

 Score =  357 bits (917), Expect = 2e-96
 Identities = 184/248 (74%), Positives = 212/248 (85%), Gaps = 4/248 (1%)
 Frame = -2

Query: 733 VVYYGEMVLGEVDVYGDEDKWKKDLLNMKEIRITHFSQPSERCPPLAVLHTIT-SGVCFK 557
           VVY+G+ +LG+V++Y +E    K++  +KEIRITHFSQPSERCPPLAVLHTI  SG+CFK
Sbjct: 5   VVYHGDELLGDVEIYPEEKNGYKNI-EVKEIRITHFSQPSERCPPLAVLHTIAASGICFK 63

Query: 556 MESKTQQQQDA-LSHLHASCITENKTAVMPLCGEEIHLVAMYSRNNDR--PCFWGFVVAS 386
           MESKT Q QD  L+ LH+SCI ENKTA+M    EE+HLVAM+SR+ D+  PCFWGF VA 
Sbjct: 64  MESKTSQSQDTPLNLLHSSCIMENKTAIMMFGVEELHLVAMFSRDLDKQYPCFWGFNVAM 123

Query: 385 GLYNSCLVMLNLRCLSIVFDLDETLVVANTLRSFEDRIEALHRKINSEVDPQRISGMQAE 206
           GLYNSCL MLNLRCL IVFDLDETLVVANT+RSFEDRIEAL RKI+SEVDPQR +GM AE
Sbjct: 124 GLYNSCLDMLNLRCLGIVFDLDETLVVANTMRSFEDRIEALQRKISSEVDPQRANGMLAE 183

Query: 205 IKRYLYDKSILKQYAETDQVVDNGKVIRIQSEIVPALSDSHQPIVRPLIRLPEKNIILTR 26
           +KRY  DK ILKQYAE DQV++NGKVI+ QSE+VPALSD+HQP+VRPLIRL EKNIILTR
Sbjct: 184 VKRYQDDKIILKQYAENDQVIENGKVIKSQSEVVPALSDNHQPVVRPLIRLHEKNIILTR 243

Query: 25  INPQIRDT 2
           INPQIRDT
Sbjct: 244 INPQIRDT 251