BLASTX nr result

ID: Glycyrrhiza23_contig00019021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019021
         (1366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516399.1| PREDICTED: uncharacterized protein LOC100798...   357   4e-96
ref|XP_003604537.1| hypothetical protein MTR_4g014250 [Medicago ...   329   9e-88
ref|XP_004148597.1| PREDICTED: BRCA1-A complex subunit Abraxas-l...   308   3e-81
emb|CBI18106.3| unnamed protein product [Vitis vinifera]              291   4e-76
ref|XP_002263634.1| PREDICTED: BRCA1-A complex subunit Abraxas [...   291   4e-76

>ref|XP_003516399.1| PREDICTED: uncharacterized protein LOC100798241 [Glycine max]
          Length = 307

 Score =  357 bits (916), Expect = 4e-96
 Identities = 202/314 (64%), Positives = 229/314 (72%), Gaps = 7/314 (2%)
 Frame = +2

Query: 62  MDDQPLQKIAISGPTLSSLIHHFSTSPSSSIDGLLFGHVTHVTPLNLSDDSSEDS----P 229
           M+D PLQKIAISGPTL+SLI  FSTSPSS I GLLFGHVT + PL LSDD +  +    P
Sbjct: 1   MEDPPLQKIAISGPTLASLIQRFSTSPSS-IHGLLFGHVTPL-PLTLSDDDTSSAATPTP 58

Query: 230 SVLAIVTGFLXXXXXXXXXXXVDPTXXXXXXXXXXXXXGWFSGRRRTPLRPSMREFSVTA 409
           ++LA VTGFL           V P+             GWFS RRR+PLRPSMREFSVTA
Sbjct: 59  TLLATVTGFLTSPSFHDSSGTVLPSSLPNSPLL-----GWFSARRRSPLRPSMREFSVTA 113

Query: 410 XXXXXXXXXXXIEN-SPEPSTFNPCVFLLLASPLWDQT-SHVHTHEYRVYQFRRGAHSFD 583
                      I+N + EPS F PC+FLLLASP  D   SHVHTHEYR +QFR  A SF+
Sbjct: 114 SLSSLTQFSSQIQNPNSEPSLFPPCIFLLLASPSSDNHHSHVHTHEYRAFQFRPAALSFE 173

Query: 584 PKSLDVVNIGPAFRGHYGSFSPNSPFPALDCHLGHSPMNRDDD-DERLSQLKQASKDQRE 760
           P+SLDVVNIGPAFRGHYG+FSPNS  P LDC    SPM   +  DE L ++KQA+KDQRE
Sbjct: 174 PRSLDVVNIGPAFRGHYGAFSPNSNLPPLDCGPHGSPMMMSEGGDEVLGKMKQAAKDQRE 233

Query: 761 LDASAEGFEVGRLSRLMGSEARNYTQNLEDLYQKMLVKIENLTGLVEKSSAKVLEQENHN 940
           LD  AEGFE+GRLSR+MGSEAR+ T+ LE+LYQKMLVKIENLTGLVEKSSA VLEQENHN
Sbjct: 234 LDKCAEGFEIGRLSRMMGSEARSCTEGLEELYQKMLVKIENLTGLVEKSSAMVLEQENHN 293

Query: 941 RKLRHKILRSSASE 982
           RKL+HKILRS+ASE
Sbjct: 294 RKLKHKILRSAASE 307


>ref|XP_003604537.1| hypothetical protein MTR_4g014250 [Medicago truncatula]
           gi|355505592|gb|AES86734.1| hypothetical protein
           MTR_4g014250 [Medicago truncatula]
          Length = 274

 Score =  329 bits (844), Expect = 9e-88
 Identities = 172/303 (56%), Positives = 210/303 (69%)
 Frame = +2

Query: 74  PLQKIAISGPTLSSLIHHFSTSPSSSIDGLLFGHVTHVTPLNLSDDSSEDSPSVLAIVTG 253
           PLQKIAISGPTLSSL+HH ST+ +S+  GLLFGHVT  TPLNL+D+SS+ +P++LA VTG
Sbjct: 6   PLQKIAISGPTLSSLLHHLSTTSTSTFSGLLFGHVTLTTPLNLTDNSSDTTPTLLATVTG 65

Query: 254 FLXXXXXXXXXXXVDPTXXXXXXXXXXXXXGWFSGRRRTPLRPSMREFSVTAXXXXXXXX 433
           FL           ++ T             GWFSG                         
Sbjct: 66  FLTTSSFLSPSGDINITTLRRLVPHSSSLLGWFSG------------------------- 100

Query: 434 XXXIENSPEPSTFNPCVFLLLASPLWDQTSHVHTHEYRVYQFRRGAHSFDPKSLDVVNIG 613
                 SP    F P +F LL+SP+ DQ+SH+HTH+YRVYQF   + SF+P S++++NIG
Sbjct: 101 ------SPP---FTPTLFFLLSSPISDQSSHIHTHDYRVYQFLSESQSFNPVSIEIINIG 151

Query: 614 PAFRGHYGSFSPNSPFPALDCHLGHSPMNRDDDDERLSQLKQASKDQRELDASAEGFEVG 793
           PAF GHYGSF PNSPFP LDC L + PM +DDD+E+LS++KQ SKDQRELD  AEG+EV 
Sbjct: 152 PAFWGHYGSFIPNSPFPVLDCQLSYLPMIQDDDNEKLSKMKQTSKDQRELDVCAEGYEVK 211

Query: 794 RLSRLMGSEARNYTQNLEDLYQKMLVKIENLTGLVEKSSAKVLEQENHNRKLRHKILRSS 973
           RLS LMGSEA+NYTQ+LEDLY KMLVKI NLT LVE+SSAKVLEQENHN+KL+HKIL+S+
Sbjct: 212 RLSNLMGSEAKNYTQSLEDLYLKMLVKIGNLTTLVEQSSAKVLEQENHNKKLKHKILKSA 271

Query: 974 ASE 982
           A E
Sbjct: 272 APE 274


>ref|XP_004148597.1| PREDICTED: BRCA1-A complex subunit Abraxas-like [Cucumis sativus]
           gi|449530041|ref|XP_004172005.1| PREDICTED: BRCA1-A
           complex subunit Abraxas-like [Cucumis sativus]
          Length = 322

 Score =  308 bits (788), Expect = 3e-81
 Identities = 168/320 (52%), Positives = 212/320 (66%), Gaps = 18/320 (5%)
 Frame = +2

Query: 62  MDDQPLQKIAISGPTLSSLIHHFSTSPSSSIDGLLFGHVTHVTPLNLSDDSSEDS---PS 232
           M+D  LQK+AISGP L+SLI  FS+S S ++DGLLFGHV+ VTPL+LSDDSS  +   PS
Sbjct: 1   MEDDSLQKVAISGPILASLIQRFSSS-SGAVDGLLFGHVSDVTPLSLSDDSSSSTDTQPS 59

Query: 233 V-LAIVTGFLXXXXXXXXXXXVD--------------PTXXXXXXXXXXXXXGWFSGRRR 367
           + +A VTGFL           +                +             GWFSGRRR
Sbjct: 60  LRVATVTGFLCSGSTNSFYDSLGRVDSQSLNRLLDRHQSDGQAQAQPHDSLLGWFSGRRR 119

Query: 368 TPLRPSMREFSVTAXXXXXXXXXXXIENSPEPSTFNPCVFLLLASPLWDQTSHVHTHEYR 547
           T LRPSMRE+ V++           ++++  P+   P VFLLL SPL DQ   +HTHEYR
Sbjct: 120 TQLRPSMREYLVSSSLSSMKQLSFPVKDAVNPTNLIPSVFLLLTSPLSDQI--IHTHEYR 177

Query: 548 VYQFRRGAHSFDPKSLDVVNIGPAFRGHYGSFSPNSPFPALDCHLGHSPMNRDDDDERLS 727
            +QFR     F+PKS+D+VNIGPAFRGHYGSF PNSPFP L C +  SPMN D +D+ L+
Sbjct: 178 AFQFRSSNEFFEPKSIDIVNIGPAFRGHYGSFIPNSPFPHLLCEMRASPMNEDKNDDNLN 237

Query: 728 QLKQASKDQRELDASAEGFEVGRLSRLMGSEARNYTQNLEDLYQKMLVKIENLTGLVEKS 907
            +KQ SK Q++++  AEGF+VG L+RL+GSEA NYT  LEDLY+KML K E+L  LVE+S
Sbjct: 238 MMKQNSKYQKQMNVCAEGFDVGNLTRLLGSEAANYTAGLEDLYEKMLAKTESLARLVEES 297

Query: 908 SAKVLEQENHNRKLRHKILR 967
           SA+VLEQENHNRKLR+K+ R
Sbjct: 298 SAQVLEQENHNRKLRYKVAR 317


>emb|CBI18106.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  291 bits (744), Expect = 4e-76
 Identities = 165/310 (53%), Positives = 198/310 (63%), Gaps = 10/310 (3%)
 Frame = +2

Query: 62   MDDQPLQKIAISGPTLSSLIHHFSTSPSSSIDGLLFGHVTHVTPLNLSDD----SSEDSP 229
            MDD PLQKI ISGPTL+S+I  FST+    +DGLLFGHV+H+ P +LSDD    SS D  
Sbjct: 319  MDDLPLQKIQISGPTLASMIQRFSTA-LGDVDGLLFGHVSHIAPSSLSDDDPLGSSSDPS 377

Query: 230  SVLAIVTGFLXXXXXXXXXXXVDPTXXXXXXXXXXXXX------GWFSGRRRTPLRPSMR 391
            + +A V+GFL                                  GWFSGRRR+PLRPS+R
Sbjct: 378  TFVATVSGFLCSGTIDSFYDSSGQVNVLALRRLLADRVPLRSLIGWFSGRRRSPLRPSLR 437

Query: 392  EFSVTAXXXXXXXXXXXIENSPEPSTFNPCVFLLLASPLWDQTSHVHTHEYRVYQFRRGA 571
            E SVTA           IENS   S F P +FLL ASPL DQ   +HTHEY+ YQ+   +
Sbjct: 438  ESSVTACLSTKAQFSFPIENSL--SNFRPSLFLLFASPLSDQV--IHTHEYKAYQYCLSS 493

Query: 572  HSFDPKSLDVVNIGPAFRGHYGSFSPNSPFPALDCHLGHSPMNRDDDDERLSQLKQASKD 751
             + +PKS+D+VNIGPAFRGHYGSFSP+SPFP+L C L  SPM  DD D       QA   
Sbjct: 494  QTLEPKSIDIVNIGPAFRGHYGSFSPSSPFPSLACDLRGSPMAEDDTDATRVSKAQA--- 550

Query: 752  QRELDASAEGFEVGRLSRLMGSEARNYTQNLEDLYQKMLVKIENLTGLVEKSSAKVLEQE 931
            QRELD  AEG ++G L RLMGSEA NYT  LEDLY+KML K+++L  LVEK+SAKV EQE
Sbjct: 551  QRELDTCAEGVQIGSLRRLMGSEATNYTAGLEDLYEKMLAKLDSLARLVEKTSAKVHEQE 610

Query: 932  NHNRKLRHKI 961
            +HN KLR+K+
Sbjct: 611  SHNVKLRYKV 620


>ref|XP_002263634.1| PREDICTED: BRCA1-A complex subunit Abraxas [Vitis vinifera]
          Length = 306

 Score =  291 bits (744), Expect = 4e-76
 Identities = 165/310 (53%), Positives = 198/310 (63%), Gaps = 10/310 (3%)
 Frame = +2

Query: 62  MDDQPLQKIAISGPTLSSLIHHFSTSPSSSIDGLLFGHVTHVTPLNLSDD----SSEDSP 229
           MDD PLQKI ISGPTL+S+I  FST+    +DGLLFGHV+H+ P +LSDD    SS D  
Sbjct: 1   MDDLPLQKIQISGPTLASMIQRFSTA-LGDVDGLLFGHVSHIAPSSLSDDDPLGSSSDPS 59

Query: 230 SVLAIVTGFLXXXXXXXXXXXVDPTXXXXXXXXXXXXX------GWFSGRRRTPLRPSMR 391
           + +A V+GFL                                  GWFSGRRR+PLRPS+R
Sbjct: 60  TFVATVSGFLCSGTIDSFYDSSGQVNVLALRRLLADRVPLRSLIGWFSGRRRSPLRPSLR 119

Query: 392 EFSVTAXXXXXXXXXXXIENSPEPSTFNPCVFLLLASPLWDQTSHVHTHEYRVYQFRRGA 571
           E SVTA           IENS   S F P +FLL ASPL DQ   +HTHEY+ YQ+   +
Sbjct: 120 ESSVTACLSTKAQFSFPIENSL--SNFRPSLFLLFASPLSDQV--IHTHEYKAYQYCLSS 175

Query: 572 HSFDPKSLDVVNIGPAFRGHYGSFSPNSPFPALDCHLGHSPMNRDDDDERLSQLKQASKD 751
            + +PKS+D+VNIGPAFRGHYGSFSP+SPFP+L C L  SPM  DD D       QA   
Sbjct: 176 QTLEPKSIDIVNIGPAFRGHYGSFSPSSPFPSLACDLRGSPMAEDDTDATRVSKAQA--- 232

Query: 752 QRELDASAEGFEVGRLSRLMGSEARNYTQNLEDLYQKMLVKIENLTGLVEKSSAKVLEQE 931
           QRELD  AEG ++G L RLMGSEA NYT  LEDLY+KML K+++L  LVEK+SAKV EQE
Sbjct: 233 QRELDTCAEGVQIGSLRRLMGSEATNYTAGLEDLYEKMLAKLDSLARLVEKTSAKVHEQE 292

Query: 932 NHNRKLRHKI 961
           +HN KLR+K+
Sbjct: 293 SHNVKLRYKV 302


Top