BLASTX nr result

ID: Glycyrrhiza23_contig00019015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019015
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543225.1| PREDICTED: RNA exonuclease 4-like [Glycine max]   235   9e-60
ref|XP_003539610.1| PREDICTED: RNA exonuclease 4-like [Glycine max]   231   1e-58
gb|ACU17880.1| unknown [Glycine max]                                  224   1e-56
ref|XP_002300407.1| predicted protein [Populus trichocarpa] gi|2...   203   3e-50
ref|XP_002282870.1| PREDICTED: RNA exonuclease 4-like [Vitis vin...   202   7e-50

>ref|XP_003543225.1| PREDICTED: RNA exonuclease 4-like [Glycine max]
          Length = 266

 Score =  235 bits (599), Expect = 9e-60
 Identities = 119/156 (76%), Positives = 125/156 (80%)
 Frame = +2

Query: 2   RPIERVVDFRTKISGIRPRDLRKAKDFWTAQNKVAELIKGRILVGHALYNDLKALLLSHP 181
           RPIERVVDFRTKISGIRPRDLRKAKDFW AQ KVAELI GRILVGHAL NDLKALLLSHP
Sbjct: 111 RPIERVVDFRTKISGIRPRDLRKAKDFWAAQKKVAELINGRILVGHALSNDLKALLLSHP 170

Query: 182 KKDIRDTSEYQPFLLRSSGRVALRHLASEHLGVKIQTGEHCPIDDARAAMLLYQRNRKEW 361
           +KDIRDTSEY+PFL RSS R ALRHLA+EHLGV IQTGEHCP++DARAAMLLYQRNRKEW
Sbjct: 171 RKDIRDTSEYRPFLNRSSSRRALRHLAAEHLGVNIQTGEHCPVEDARAAMLLYQRNRKEW 230

Query: 362 EKSIXXXXXXXXXXXXXXXXXXXXNEDASNANHAGI 469
           EK+I                    NED SNANH  I
Sbjct: 231 EKNIKDQFRLKQKQRKSKQKKKQKNEDVSNANHVEI 266


>ref|XP_003539610.1| PREDICTED: RNA exonuclease 4-like [Glycine max]
          Length = 266

 Score =  231 bits (589), Expect = 1e-58
 Identities = 118/156 (75%), Positives = 123/156 (78%)
 Frame = +2

Query: 2   RPIERVVDFRTKISGIRPRDLRKAKDFWTAQNKVAELIKGRILVGHALYNDLKALLLSHP 181
           RPIERVVDFRTKISGIRPRDLRKAKDFW AQ KVAELI GRILVGHAL NDLKALLLSHP
Sbjct: 111 RPIERVVDFRTKISGIRPRDLRKAKDFWAAQKKVAELINGRILVGHALSNDLKALLLSHP 170

Query: 182 KKDIRDTSEYQPFLLRSSGRVALRHLASEHLGVKIQTGEHCPIDDARAAMLLYQRNRKEW 361
           +KDIRDTSEYQPFL RSS R ALRHLA++HLGV IQTGEHCPI+DARAAMLLYQRN+KEW
Sbjct: 171 RKDIRDTSEYQPFLNRSSSRRALRHLAAKHLGVNIQTGEHCPIEDARAAMLLYQRNKKEW 230

Query: 362 EKSIXXXXXXXXXXXXXXXXXXXXNEDASNANHAGI 469
           EKSI                    NE  SN NH  I
Sbjct: 231 EKSIKDQFRLKQKQRKSKQKKKLKNEHTSNGNHVEI 266


>gb|ACU17880.1| unknown [Glycine max]
          Length = 237

 Score =  224 bits (572), Expect = 1e-56
 Identities = 110/124 (88%), Positives = 116/124 (93%)
 Frame = +2

Query: 2   RPIERVVDFRTKISGIRPRDLRKAKDFWTAQNKVAELIKGRILVGHALYNDLKALLLSHP 181
           RPIERVVDFRTKISGIRPRDLRKAKDFW AQ KVAELI GRILVGHAL NDLKALLLSHP
Sbjct: 111 RPIERVVDFRTKISGIRPRDLRKAKDFWAAQKKVAELINGRILVGHALSNDLKALLLSHP 170

Query: 182 KKDIRDTSEYQPFLLRSSGRVALRHLASEHLGVKIQTGEHCPIDDARAAMLLYQRNRKEW 361
           +KDIRDTSEY+PFL RSS R ALRHLA+EHLGV IQTGEHCP++DARAAMLLYQRNRKEW
Sbjct: 171 RKDIRDTSEYRPFLNRSSSRRALRHLAAEHLGVNIQTGEHCPVEDARAAMLLYQRNRKEW 230

Query: 362 EKSI 373
           EK+I
Sbjct: 231 EKNI 234


>ref|XP_002300407.1| predicted protein [Populus trichocarpa] gi|222847665|gb|EEE85212.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score =  203 bits (517), Expect = 3e-50
 Identities = 102/124 (82%), Positives = 111/124 (89%)
 Frame = +2

Query: 2   RPIERVVDFRTKISGIRPRDLRKAKDFWTAQNKVAELIKGRILVGHALYNDLKALLLSHP 181
           RP+ERV DFRT+ISGIRPRDLRKA+DF TAQ KVA LIKGRILVGHAL NDLKALLL HP
Sbjct: 118 RPVERVADFRTQISGIRPRDLRKARDFSTAQKKVAVLIKGRILVGHALSNDLKALLLGHP 177

Query: 182 KKDIRDTSEYQPFLLRSSGRVALRHLASEHLGVKIQTGEHCPIDDARAAMLLYQRNRKEW 361
           KKD+RDTSEYQPF L+   R ALRHLA+E LG KIQ+GEHCPI+DARAAMLLYQRN+KEW
Sbjct: 178 KKDLRDTSEYQPF-LKGRRRKALRHLAAEFLGAKIQSGEHCPIEDARAAMLLYQRNKKEW 236

Query: 362 EKSI 373
           EKSI
Sbjct: 237 EKSI 240


>ref|XP_002282870.1| PREDICTED: RNA exonuclease 4-like [Vitis vinifera]
          Length = 277

 Score =  202 bits (514), Expect = 7e-50
 Identities = 104/158 (65%), Positives = 117/158 (74%)
 Frame = +2

Query: 2   RPIERVVDFRTKISGIRPRDLRKAKDFWTAQNKVAELIKGRILVGHALYNDLKALLLSHP 181
           RP+E VVDFRT+ISGIRPRDL+KAKDF T Q +VAELIKGR+LVGHAL NDLKALLLSHP
Sbjct: 120 RPVEWVVDFRTEISGIRPRDLKKAKDFQTVQRQVAELIKGRLLVGHALRNDLKALLLSHP 179

Query: 182 KKDIRDTSEYQPFLLRSSGRVALRHLASEHLGVKIQTGEHCPIDDARAAMLLYQRNRKEW 361
           K D+RDTSE + FL     RVALRHLA+E LGVKIQ GEHCP++DARAAMLLYQRNRK+W
Sbjct: 180 KVDMRDTSECELFLKEERRRVALRHLAAEFLGVKIQNGEHCPVEDARAAMLLYQRNRKQW 239

Query: 362 EKSIXXXXXXXXXXXXXXXXXXXXNEDASNANHAGIGS 475
           EK+I                      DAS+ NHA   S
Sbjct: 240 EKNIKDQIRLRQKQKKRKQKKKPKRRDASDVNHAATAS 277


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