BLASTX nr result

ID: Glycyrrhiza23_contig00018980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018980
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42752.1| unknown [Lotus japonicus]                              137   1e-30
ref|XP_003545890.1| PREDICTED: splicing factor 3B subunit 2-like...   137   1e-30
ref|XP_003543065.1| PREDICTED: splicing factor 3B subunit 2-like...   137   1e-30
ref|XP_003541544.1| PREDICTED: splicing factor 3B subunit 2-like...   136   3e-30
ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like...   134   1e-29

>gb|AFK42752.1| unknown [Lotus japonicus]
          Length = 183

 Score =  137 bits (345), Expect = 1e-30
 Identities = 85/165 (51%), Positives = 98/165 (59%), Gaps = 5/165 (3%)
 Frame = -2

Query: 578 FIKYXXXXXXXXLQELCLELHTLMWLALAPRTNQGLKGLICLKVKSQIKWMSLCSQKSWM 399
           FI+Y        LQELCLE  TL WLALAPRT+Q LKGLICL+ +SQIKWMSL S KSW 
Sbjct: 17  FIRYLKRRKKKLLQELCLEPRTLTWLALAPRTSQVLKGLICLEDRSQIKWMSLYSLKSWK 76

Query: 398 PWKMFYLQSMKKQGRKRSYGVSVRISVTWLQXXXXXXXXXXXXXRASPRRKTLSFKVVRF 219
            WKMF L+SMKKQG+KR   VSV+I VTWLQ              AS RR+T SF+   +
Sbjct: 77  QWKMFCLRSMKKQGKKRRCAVSVKILVTWLQRMRKREKEKCKKRMASRRRRTSSFRARSY 136

Query: 218 LFL-LQEKRGTC----SHQIVISHE*RRIGC*LCSSYLYHIIVCK 99
            FL LQ   G        Q   SHE R     +C + LY II+ K
Sbjct: 137 FFLSLQMAIGDALTFPLMQFSPSHEKR-----ICLTQLYFIIILK 176


>ref|XP_003545890.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max]
          Length = 575

 Score =  137 bits (345), Expect = 1e-30
 Identities = 73/91 (80%), Positives = 76/91 (83%)
 Frame = -1

Query: 579 LYQVLEEKEEKIAPXXXXXXXXXXXXXXXTQDKSGAKRVDLLKGQKSDKVDVTLQPEELD 400
           LYQVLEEKEEKIAP               TQDKSGAKRVDLL+GQK+DKVDVTLQPEEL+
Sbjct: 461 LYQVLEEKEEKIAPGTLLGTTHTYVVGTGTQDKSGAKRVDLLRGQKTDKVDVTLQPEELE 520

Query: 399 AMENVLPAKYEEAREEEKLRSQREDFSDMVA 307
           AMENVLPAKYEEAREEEKLRSQREDFSDMVA
Sbjct: 521 AMENVLPAKYEEAREEEKLRSQREDFSDMVA 551


>ref|XP_003543065.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max]
          Length = 575

 Score =  137 bits (345), Expect = 1e-30
 Identities = 73/91 (80%), Positives = 76/91 (83%)
 Frame = -1

Query: 579 LYQVLEEKEEKIAPXXXXXXXXXXXXXXXTQDKSGAKRVDLLKGQKSDKVDVTLQPEELD 400
           LYQVLEEKEEKIAP               TQDKSGAKRVDLL+GQK+DKVDVTLQPEEL+
Sbjct: 461 LYQVLEEKEEKIAPGTLLGTTHTYVVGTGTQDKSGAKRVDLLRGQKTDKVDVTLQPEELE 520

Query: 399 AMENVLPAKYEEAREEEKLRSQREDFSDMVA 307
           AMENVLPAKYEEAREEEKLRSQREDFSDMVA
Sbjct: 521 AMENVLPAKYEEAREEEKLRSQREDFSDMVA 551


>ref|XP_003541544.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max]
          Length = 577

 Score =  136 bits (342), Expect = 3e-30
 Identities = 73/91 (80%), Positives = 75/91 (82%)
 Frame = -1

Query: 579 LYQVLEEKEEKIAPXXXXXXXXXXXXXXXTQDKSGAKRVDLLKGQKSDKVDVTLQPEELD 400
           LYQVLEEKEEKIAP               TQDKSGAKRVDLL+GQKSDKVDVTL PEELD
Sbjct: 462 LYQVLEEKEEKIAPGTLLGTTHTYVVNTGTQDKSGAKRVDLLRGQKSDKVDVTLLPEELD 521

Query: 399 AMENVLPAKYEEAREEEKLRSQREDFSDMVA 307
           AMENVLPAKYEEAREEEKLR+QREDFSDMVA
Sbjct: 522 AMENVLPAKYEEAREEEKLRNQREDFSDMVA 552


>ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like [Cucumis sativus]
           gi|449515207|ref|XP_004164641.1| PREDICTED: splicing
           factor 3B subunit 2-like [Cucumis sativus]
          Length = 580

 Score =  134 bits (337), Expect = 1e-29
 Identities = 70/91 (76%), Positives = 76/91 (83%)
 Frame = -1

Query: 579 LYQVLEEKEEKIAPXXXXXXXXXXXXXXXTQDKSGAKRVDLLKGQKSDKVDVTLQPEELD 400
           LYQVLEEKEE++AP               TQDK+GAKRVDLL+GQKSDKVDVTL+PEEL+
Sbjct: 466 LYQVLEEKEERVAPGTLLGTSHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELE 525

Query: 399 AMENVLPAKYEEAREEEKLRSQREDFSDMVA 307
           AMENVLPAKYEEAREEEKLRSQREDFSDMVA
Sbjct: 526 AMENVLPAKYEEAREEEKLRSQREDFSDMVA 556


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