BLASTX nr result

ID: Glycyrrhiza23_contig00018956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018956
         (928 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543119.1| PREDICTED: protein RMD5 homolog A-like isofo...   290   e-127
ref|XP_003545753.1| PREDICTED: protein RMD5 homolog A-like [Glyc...   289   e-127
ref|XP_003593323.1| RMD5-like protein [Medicago truncatula] gi|3...   265   e-119
ref|XP_002264694.1| PREDICTED: protein RMD5 homolog A isoform 1 ...   238   e-106
ref|XP_002313209.1| predicted protein [Populus trichocarpa] gi|1...   221   e-104

>ref|XP_003543119.1| PREDICTED: protein RMD5 homolog A-like isoform 1 [Glycine max]
           gi|356549477|ref|XP_003543120.1| PREDICTED: protein RMD5
           homolog A-like isoform 2 [Glycine max]
          Length = 385

 Score =  290 bits (742), Expect(2) = e-127
 Identities = 145/159 (91%), Positives = 153/159 (96%)
 Frame = +3

Query: 3   EPDATSLRSQYLEMHQIIEAMRGRDLQPALTWVSANRKELVQIGSNLELKIHTLQFVEVL 182
           EPDA +LRSQ+LEMHQII AMR R+LQPALTWVSANR++LVQIGSNLELKIHTLQFVEVL
Sbjct: 140 EPDAAALRSQFLEMHQIIGAMRERNLQPALTWVSANREKLVQIGSNLELKIHTLQFVEVL 199

Query: 183 QNGTRADALKYARTYLAPFASLNKDEFQKLMGCLLYAGRLENSPYSELMSPIHWEMTTEE 362
           QNGTRADALKYARTYLAPFASLNK EF KLMGCLLYAGRLE+SPYSEL+SPIHWEMTTEE
Sbjct: 200 QNGTRADALKYARTYLAPFASLNKGEFPKLMGCLLYAGRLESSPYSELLSPIHWEMTTEE 259

Query: 363 LARQFCTLMGQSYENPLSVAVAAGVEGLPTLLKLANVMA 479
           L RQFCTL+GQSYENPLSVAVAAGVEGLPTLLKLANVMA
Sbjct: 260 LTRQFCTLLGQSYENPLSVAVAAGVEGLPTLLKLANVMA 298



 Score =  192 bits (489), Expect(2) = e-127
 Identities = 90/94 (95%), Positives = 92/94 (97%)
 Frame = +2

Query: 530 KLANVMAAKKQEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLC 709
           KLANVMAAKKQEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLC
Sbjct: 292 KLANVMAAKKQEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLC 351

Query: 710 KQSITKLSKNSTRTFKCPYCPAEAAVAHCRQLYF 811
           KQSI KLSKNSTRTFKCPYCPAEA VA+C+QLYF
Sbjct: 352 KQSIMKLSKNSTRTFKCPYCPAEATVANCKQLYF 385


>ref|XP_003545753.1| PREDICTED: protein RMD5 homolog A-like [Glycine max]
          Length = 385

 Score =  289 bits (740), Expect(2) = e-127
 Identities = 145/159 (91%), Positives = 153/159 (96%)
 Frame = +3

Query: 3   EPDATSLRSQYLEMHQIIEAMRGRDLQPALTWVSANRKELVQIGSNLELKIHTLQFVEVL 182
           EPDA +LRSQ+LEMHQII AMR R+LQPALTWVSANR++LVQIGSNLELKIHTLQFVEVL
Sbjct: 140 EPDAAALRSQFLEMHQIIGAMRERNLQPALTWVSANREKLVQIGSNLELKIHTLQFVEVL 199

Query: 183 QNGTRADALKYARTYLAPFASLNKDEFQKLMGCLLYAGRLENSPYSELMSPIHWEMTTEE 362
           QNGTRADALKYARTYLAPFASLNK EF KLMGCLLYAGRLE+SPYSEL+SPIHWEMTTEE
Sbjct: 200 QNGTRADALKYARTYLAPFASLNKGEFPKLMGCLLYAGRLESSPYSELLSPIHWEMTTEE 259

Query: 363 LARQFCTLMGQSYENPLSVAVAAGVEGLPTLLKLANVMA 479
           LARQFCTL+GQSYENPLSVAVAAGVEGLP LLKLANVMA
Sbjct: 260 LARQFCTLLGQSYENPLSVAVAAGVEGLPILLKLANVMA 298



 Score =  192 bits (489), Expect(2) = e-127
 Identities = 90/94 (95%), Positives = 92/94 (97%)
 Frame = +2

Query: 530 KLANVMAAKKQEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLC 709
           KLANVMAAKKQEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLC
Sbjct: 292 KLANVMAAKKQEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLC 351

Query: 710 KQSITKLSKNSTRTFKCPYCPAEAAVAHCRQLYF 811
           KQSI KLSKNSTRTFKCPYCPAEA VA+C+QLYF
Sbjct: 352 KQSIMKLSKNSTRTFKCPYCPAEATVANCKQLYF 385


>ref|XP_003593323.1| RMD5-like protein [Medicago truncatula] gi|355482371|gb|AES63574.1|
           RMD5-like protein [Medicago truncatula]
          Length = 387

 Score =  265 bits (676), Expect(2) = e-119
 Identities = 127/159 (79%), Positives = 146/159 (91%)
 Frame = +3

Query: 3   EPDATSLRSQYLEMHQIIEAMRGRDLQPALTWVSANRKELVQIGSNLELKIHTLQFVEVL 182
           E +AT++RS +LEMH +IEAMR R+LQPALTWVSANR++LVQIGSNLELKIHTLQ+VEV+
Sbjct: 142 ESNATAIRSNFLEMHHVIEAMRVRNLQPALTWVSANREKLVQIGSNLELKIHTLQYVEVV 201

Query: 183 QNGTRADALKYARTYLAPFASLNKDEFQKLMGCLLYAGRLENSPYSELMSPIHWEMTTEE 362
           QNGT+ADALKY+RT LAPFA L KDEF KLMGCL+Y GRL+NSPY+EL+SP+HWEMTTEE
Sbjct: 202 QNGTQADALKYSRTCLAPFAKLYKDEFHKLMGCLMYVGRLQNSPYAELLSPVHWEMTTEE 261

Query: 363 LARQFCTLMGQSYENPLSVAVAAGVEGLPTLLKLANVMA 479
           LARQFC LMGQSYENPL+V  AAG+EGLPTLLKL NVMA
Sbjct: 262 LARQFCYLMGQSYENPLNVVFAAGIEGLPTLLKLVNVMA 300



 Score =  192 bits (488), Expect(2) = e-119
 Identities = 89/94 (94%), Positives = 91/94 (96%)
 Frame = +2

Query: 530 KLANVMAAKKQEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLC 709
           KL NVMAAKKQEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLC
Sbjct: 294 KLVNVMAAKKQEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLC 353

Query: 710 KQSITKLSKNSTRTFKCPYCPAEAAVAHCRQLYF 811
           KQSI KLSKNSTRTFKCPYCPAEA VAHCRQ++F
Sbjct: 354 KQSIMKLSKNSTRTFKCPYCPAEATVAHCRQVFF 387


>ref|XP_002264694.1| PREDICTED: protein RMD5 homolog A isoform 1 [Vitis vinifera]
           gi|359475593|ref|XP_003631711.1| PREDICTED: protein RMD5
           homolog A isoform 2 [Vitis vinifera]
           gi|296088090|emb|CBI35449.3| unnamed protein product
           [Vitis vinifera]
          Length = 383

 Score =  238 bits (607), Expect(2) = e-106
 Identities = 116/159 (72%), Positives = 137/159 (86%)
 Frame = +3

Query: 3   EPDATSLRSQYLEMHQIIEAMRGRDLQPALTWVSANRKELVQIGSNLELKIHTLQFVEVL 182
           EP+ T+L+SQ+LEM QI++AM+ RDL+PAL WVS NR++L Q GSNLELK+H LQFVE+L
Sbjct: 138 EPEDTALKSQFLEMFQILDAMKARDLEPALNWVSNNREKLKQNGSNLELKLHRLQFVEIL 197

Query: 183 QNGTRADALKYARTYLAPFASLNKDEFQKLMGCLLYAGRLENSPYSELMSPIHWEMTTEE 362
           Q G RADAL YARTYLAPFASL+ DE QKLM CLL+ GRL++SPYSELM P  WE   EE
Sbjct: 198 QKGGRADALNYARTYLAPFASLHMDEIQKLMACLLWVGRLDSSPYSELMVPSLWEKLAEE 257

Query: 363 LARQFCTLMGQSYENPLSVAVAAGVEGLPTLLKLANVMA 479
           L RQFC+L+GQSYE+PLSVA+AAG+EGLPTLLKLANVMA
Sbjct: 258 LTRQFCSLLGQSYESPLSVAIAAGIEGLPTLLKLANVMA 296



 Score =  173 bits (439), Expect(2) = e-106
 Identities = 80/94 (85%), Positives = 85/94 (90%)
 Frame = +2

Query: 530 KLANVMAAKKQEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLC 709
           KLANVMAAKKQEWQ MKQLPVPV+LG+EFQFHSIFVCPVSRDQGSEENPPML+PC HVLC
Sbjct: 290 KLANVMAAKKQEWQAMKQLPVPVDLGREFQFHSIFVCPVSRDQGSEENPPMLMPCGHVLC 349

Query: 710 KQSITKLSKNSTRTFKCPYCPAEAAVAHCRQLYF 811
           KQSI KLSK+STR FKCPYCP E+ V  C QLYF
Sbjct: 350 KQSIMKLSKSSTRMFKCPYCPNESTVGQCMQLYF 383


>ref|XP_002313209.1| predicted protein [Populus trichocarpa] gi|118480973|gb|ABK92440.1|
           unknown [Populus trichocarpa]
           gi|222849617|gb|EEE87164.1| predicted protein [Populus
           trichocarpa]
          Length = 384

 Score =  221 bits (563), Expect(2) = e-104
 Identities = 104/159 (65%), Positives = 133/159 (83%)
 Frame = +3

Query: 3   EPDATSLRSQYLEMHQIIEAMRGRDLQPALTWVSANRKELVQIGSNLELKIHTLQFVEVL 182
           EP+A +LRS +LE+HQI+EAMR ++++PAL W S NR++LVQ GSN+ELK+H LQFVE+L
Sbjct: 139 EPEAAALRSHFLELHQILEAMRIKNIEPALKWASTNREKLVQNGSNIELKLHQLQFVEIL 198

Query: 183 QNGTRADALKYARTYLAPFASLNKDEFQKLMGCLLYAGRLENSPYSELMSPIHWEMTTEE 362
           + G RADAL YA+T+LA FAS +  EFQKL+ C+++ GRLEN P+SEL +PIHWE  TEE
Sbjct: 199 KRGNRADALNYAKTHLASFASSHLKEFQKLIVCIMWIGRLENCPHSELFTPIHWEKLTEE 258

Query: 363 LARQFCTLMGQSYENPLSVAVAAGVEGLPTLLKLANVMA 479
           LAR FC  +GQS ++PLSVA+ AG+EGLPTLLKLANVMA
Sbjct: 259 LARDFCNFVGQSLQSPLSVAIVAGIEGLPTLLKLANVMA 297



 Score =  183 bits (464), Expect(2) = e-104
 Identities = 85/94 (90%), Positives = 88/94 (93%)
 Frame = +2

Query: 530 KLANVMAAKKQEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLC 709
           KLANVMAAKKQEWQ +KQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLC
Sbjct: 291 KLANVMAAKKQEWQALKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLC 350

Query: 710 KQSITKLSKNSTRTFKCPYCPAEAAVAHCRQLYF 811
           KQSI KLSK S+R FKCPYCPAEA+ A CRQLYF
Sbjct: 351 KQSIMKLSKGSSRAFKCPYCPAEASAAQCRQLYF 384


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