BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018929
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s...   259   2e-67
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   226   2e-57
ref|XP_004166766.1| PREDICTED: DNA-directed RNA polymerase III s...   218   6e-55
emb|CBI16226.3| unnamed protein product [Vitis vinifera]              214   5e-54
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   214   5e-54

>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           [Glycine max]
          Length = 1391

 Score =  259 bits (661), Expect = 2e-67
 Identities = 120/163 (73%), Positives = 140/163 (85%)
 Frame = +3

Query: 39  MNRSRAEGVAFTKEPYIEDAGPRRIKSIKFSTLSDSEIGKMGEVQVWKGAYYDQFRKPIP 218
           MNR+R EG+ FTKEP++ED GPR+IK++KFSTLS+SEI K+ EVQVWKG+YYD F+KPI 
Sbjct: 1   MNRARTEGITFTKEPFMEDTGPRKIKNMKFSTLSESEISKIAEVQVWKGSYYDSFKKPIH 60

Query: 219 GGLLDSRMGPASKSLVCATCHGSFSECQGHYGYLNLALPVYNVGYLSTIVEILKCTCKGC 398
           GGLLD RMGPA+KSLVCATC G+F +C GHYGYLNLALPV+NVGYLSTIVEILKC CKGC
Sbjct: 61  GGLLDPRMGPANKSLVCATCDGNFHDCPGHYGYLNLALPVFNVGYLSTIVEILKCICKGC 120

Query: 399 ARILLDEGTRKKYLKKMRNPKMDELQKIQLLKESIIKKCNKAV 527
           ARILLDE TRKK+LKKMR+ K  EL KI  +K  +IK C+K V
Sbjct: 121 ARILLDEDTRKKHLKKMRSSKKSELDKIDFVKVRVIKDCSKVV 163


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           [Cucumis sativus]
          Length = 1400

 Score =  226 bits (576), Expect = 2e-57
 Identities = 103/160 (64%), Positives = 132/160 (82%)
 Frame = +3

Query: 39  MNRSRAEGVAFTKEPYIEDAGPRRIKSIKFSTLSDSEIGKMGEVQVWKGAYYDQFRKPIP 218
           MNR++ EG+ FTK+PYIED GPR+IKS++F+T S +EI K+ EVQV+KG YYD  RKPI 
Sbjct: 1   MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGAEISKLAEVQVYKGLYYDTTRKPID 60

Query: 219 GGLLDSRMGPASKSLVCATCHGSFSECQGHYGYLNLALPVYNVGYLSTIVEILKCTCKGC 398
           GGLLD RMGPA+K   CATCH +F +C GHYGY+NLALPV+NVGY +TI+EILKC CK C
Sbjct: 61  GGLLDPRMGPANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSC 120

Query: 399 ARILLDEGTRKKYLKKMRNPKMDELQKIQLLKESIIKKCN 518
           +RILL+E   K +L+KMRNPK++ L+K+ L+K+ IIKKC+
Sbjct: 121 SRILLEEKLFKDFLRKMRNPKLEALRKVDLVKK-IIKKCS 159


>ref|XP_004166766.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like,
           partial [Cucumis sativus]
          Length = 286

 Score =  218 bits (554), Expect = 6e-55
 Identities = 101/160 (63%), Positives = 130/160 (81%)
 Frame = +3

Query: 39  MNRSRAEGVAFTKEPYIEDAGPRRIKSIKFSTLSDSEIGKMGEVQVWKGAYYDQFRKPIP 218
           MNR++ EG+ FTK+PYIED GPR+I  ++F+T S +EI K+ EVQV+KG YYD  RKPI 
Sbjct: 1   MNRAQVEGLVFTKQPYIEDVGPRKI--MQFTTFSGAEISKLAEVQVYKGLYYDTTRKPID 58

Query: 219 GGLLDSRMGPASKSLVCATCHGSFSECQGHYGYLNLALPVYNVGYLSTIVEILKCTCKGC 398
           GGLLD RMGPA+K   CATCH +F +C GHYGY+NLALPV+NVGY +TI+EILKC CK C
Sbjct: 59  GGLLDPRMGPANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSC 118

Query: 399 ARILLDEGTRKKYLKKMRNPKMDELQKIQLLKESIIKKCN 518
           +RILL+E   K +L+KMRNPK++ L+K+ L+K+ IIKKC+
Sbjct: 119 SRILLEEKLFKDFLRKMRNPKLEALRKVDLVKK-IIKKCS 157


>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  214 bits (546), Expect = 5e-54
 Identities = 104/164 (63%), Positives = 127/164 (77%), Gaps = 6/164 (3%)
 Frame = +3

Query: 57  EGVAFTKEPYIEDAGPRRIKSIKFSTLSDSEIGKMGEVQVWKGAYYDQFRKPIPGGLLDS 236
           +G+ FTKEPYIED GPR+I+SI+F+  S+SEI K  EVQVW+G YYD  RKPI  GLLD 
Sbjct: 3   DGIQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDP 62

Query: 237 RMGPASKSLVCATCHGSFSECQGHYGYLNLALPVYNVGYLSTIVEILKCTCKGCARILLD 416
           RMGPA+K+  CATC G+F +C GH GYL LALPVYNVGYLSTIV+ILKC CK C+R+LLD
Sbjct: 63  RMGPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLD 122

Query: 417 EGTRKKYLKKMRNPKMDELQKIQLLKESIIKKC------NKAVK 530
           E   K YLKKMR+ KM+ L+K +L+K+ I++KC       KAVK
Sbjct: 123 EKASKDYLKKMRSQKMEALKKAELMKK-IVQKCTAMASSKKAVK 165


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
           vinifera]
          Length = 1383

 Score =  214 bits (546), Expect = 5e-54
 Identities = 104/164 (63%), Positives = 127/164 (77%), Gaps = 6/164 (3%)
 Frame = +3

Query: 57  EGVAFTKEPYIEDAGPRRIKSIKFSTLSDSEIGKMGEVQVWKGAYYDQFRKPIPGGLLDS 236
           +G+ FTKEPYIED GPR+I+SI+F+  S+SEI K  EVQVW+G YYD  RKPI  GLLD 
Sbjct: 3   DGIQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDP 62

Query: 237 RMGPASKSLVCATCHGSFSECQGHYGYLNLALPVYNVGYLSTIVEILKCTCKGCARILLD 416
           RMGPA+K+  CATC G+F +C GH GYL LALPVYNVGYLSTIV+ILKC CK C+R+LLD
Sbjct: 63  RMGPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLD 122

Query: 417 EGTRKKYLKKMRNPKMDELQKIQLLKESIIKKC------NKAVK 530
           E   K YLKKMR+ KM+ L+K +L+K+ I++KC       KAVK
Sbjct: 123 EKASKDYLKKMRSQKMEALKKAELMKK-IVQKCTAMASSKKAVK 165