BLASTX nr result

ID: Glycyrrhiza23_contig00018919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018919
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36453.1| unknown [Lotus japonicus]                              191   8e-47
gb|AFK41645.1| unknown [Lotus japonicus]                              189   3e-46
ref|XP_003630913.1| F-box protein SKIP28 [Medicago truncatula] g...   171   6e-41
ref|XP_003532508.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   167   1e-39
emb|CBI26851.3| unnamed protein product [Vitis vinifera]              144   1e-32

>gb|AFK36453.1| unknown [Lotus japonicus]
          Length = 299

 Score =  191 bits (484), Expect = 8e-47
 Identities = 97/124 (78%), Positives = 110/124 (88%), Gaps = 2/124 (1%)
 Frame = +3

Query: 171 MEDSSKASSSLSFTVEEDEKA--QVPPHEAIFLVLPYLPVCKVLTMSRVCTSLRDAINND 344
           ME+SSKA SSLS TVE+ +    Q PPHEA+FLVL YLPV +VL MS+VC +LRDA+NND
Sbjct: 1   MEESSKAFSSLSITVEKGQAQTEQEPPHEALFLVLTYLPVYQVLAMSQVCKALRDAVNND 60

Query: 345 VLPWLNVIVERPLNSRVSDEILVEITSKANGRLKTLALMNCMHVTDKGLQRVVEQNPFIN 524
           VLPWLNVIVERPL+SR+SDEILV+ITSKANGRLKTLALMNC H+TDKGLQRVVEQNP IN
Sbjct: 61  VLPWLNVIVERPLSSRLSDEILVKITSKANGRLKTLALMNCTHITDKGLQRVVEQNPLIN 120

Query: 525 KLYI 536
           KL+I
Sbjct: 121 KLHI 124


>gb|AFK41645.1| unknown [Lotus japonicus]
          Length = 322

 Score =  189 bits (479), Expect = 3e-46
 Identities = 96/124 (77%), Positives = 109/124 (87%), Gaps = 2/124 (1%)
 Frame = +3

Query: 171 MEDSSKASSSLSFTVEEDEKA--QVPPHEAIFLVLPYLPVCKVLTMSRVCTSLRDAINND 344
           ME+SSKA SSLS TVE+ +    Q PPHEA+FLVL YLPV +VL MS+VC +LRDA+NND
Sbjct: 1   MEESSKAFSSLSITVEKGQAQTEQEPPHEALFLVLTYLPVYQVLAMSQVCKALRDAVNND 60

Query: 345 VLPWLNVIVERPLNSRVSDEILVEITSKANGRLKTLALMNCMHVTDKGLQRVVEQNPFIN 524
           VLPWLNVIVERPL+SR+SDEILV+ITSKANGRLKTLALMNC H+TDKGLQRVVEQNP  N
Sbjct: 61  VLPWLNVIVERPLSSRLSDEILVKITSKANGRLKTLALMNCTHITDKGLQRVVEQNPLTN 120

Query: 525 KLYI 536
           KL+I
Sbjct: 121 KLHI 124


>ref|XP_003630913.1| F-box protein SKIP28 [Medicago truncatula]
           gi|355524935|gb|AET05389.1| F-box protein SKIP28
           [Medicago truncatula]
          Length = 320

 Score =  171 bits (433), Expect = 6e-41
 Identities = 86/122 (70%), Positives = 103/122 (84%)
 Frame = +3

Query: 171 MEDSSKASSSLSFTVEEDEKAQVPPHEAIFLVLPYLPVCKVLTMSRVCTSLRDAINNDVL 350
           ME+S KASSS   T  E+E+ + PPHEA+FLV+ YL V +VLTMSRVCTSLR A+NNDVL
Sbjct: 1   MEESCKASSSEMSTTVEEEEQEGPPHEAMFLVIAYLRVYEVLTMSRVCTSLRYAVNNDVL 60

Query: 351 PWLNVIVERPLNSRVSDEILVEITSKANGRLKTLALMNCMHVTDKGLQRVVEQNPFINKL 530
            WL +IVE PLNSR+SD+ L++ITSKANGRL+TLALMNC+HV D GLQRVVEQNPFI +L
Sbjct: 61  LWLKIIVETPLNSRLSDDTLLKITSKANGRLQTLALMNCIHVADHGLQRVVEQNPFIEEL 120

Query: 531 YI 536
           +I
Sbjct: 121 HI 122


>ref|XP_003532508.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP28-like [Glycine
           max]
          Length = 313

 Score =  167 bits (422), Expect = 1e-39
 Identities = 82/122 (67%), Positives = 103/122 (84%)
 Frame = +3

Query: 171 MEDSSKASSSLSFTVEEDEKAQVPPHEAIFLVLPYLPVCKVLTMSRVCTSLRDAINNDVL 350
           ME+SSK   S +  VE++      PHEA+FLVL YLPV +V+ MS+VCTSLRDA+NND+L
Sbjct: 1   MEESSK---SKAVEVEQEASEAKAPHEAMFLVLAYLPVYEVVVMSQVCTSLRDAVNNDIL 57

Query: 351 PWLNVIVERPLNSRVSDEILVEITSKANGRLKTLALMNCMHVTDKGLQRVVEQNPFINKL 530
           PWLNV V+RPL+ R++D+IL++ITSKANG LKTLAL+NCMHVTD+GLQRVV+QNP INKL
Sbjct: 58  PWLNVFVQRPLSWRLNDDILIKITSKANGSLKTLALINCMHVTDEGLQRVVQQNPLINKL 117

Query: 531 YI 536
           +I
Sbjct: 118 HI 119


>emb|CBI26851.3| unnamed protein product [Vitis vinifera]
          Length = 237

 Score =  144 bits (362), Expect = 1e-32
 Identities = 68/118 (57%), Positives = 92/118 (77%)
 Frame = +3

Query: 183 SKASSSLSFTVEEDEKAQVPPHEAIFLVLPYLPVCKVLTMSRVCTSLRDAINNDVLPWLN 362
           S   S    T++E E+   PPHEA+ LVL YLP+ ++L MS VC SLRDA++ DVL WL+
Sbjct: 27  SLGHSQKELTIQEVERG--PPHEALLLVLAYLPLFELLNMSEVCRSLRDAVDKDVLQWLD 84

Query: 363 VIVERPLNSRVSDEILVEITSKANGRLKTLALMNCMHVTDKGLQRVVEQNPFINKLYI 536
           +IVE+PLN   SDEI++++TSKANGRL+TLALM+C  +TD GLQ+V+E+NP IN+LY+
Sbjct: 85  IIVEKPLNMLFSDEIMIKLTSKANGRLRTLALMSCTKITDDGLQQVIEKNPLINRLYL 142


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