BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018911
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530332.1| PREDICTED: pentatricopeptide repeat-containi...   134   8e-30
ref|XP_003617724.1| Pentatricopeptide repeat-containing protein ...   110   2e-22
emb|CBI26162.3| unnamed protein product [Vitis vinifera]               75   6e-12
gb|ABD96889.1| hypothetical protein [Cleome spinosa]                   69   4e-10
ref|XP_002873920.1| pentatricopeptide repeat-containing protein ...    64   1e-08

>ref|XP_003530332.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Glycine max]
          Length = 577

 Score =  134 bits (338), Expect = 8e-30
 Identities = 79/131 (60%), Positives = 84/131 (64%)
 Frame = -1

Query: 393 RGTPSFSLGPFLRQISAPTHRNCSGSEIAQFRNLTTETKQGDCHCPTQNPDAKDSNFTLI 214
           R TPS+SL  F  + S           IAQFRNLT+ETK GD   PT+  DAKD NF   
Sbjct: 5   RRTPSYSLVTFYVRRS-----------IAQFRNLTSETKNGDHEHPTKALDAKDCNF--- 50

Query: 213 VKEICRITRTKPRWENTLLSQYXXXXXXXXXXXXSYLNHQNNAFLSLRFFHWLCSSHPIF 34
           V EICRITRTKPRWE+TLLSQY             YL HQNNAFLSLRFFHWLCSS   F
Sbjct: 51  VYEICRITRTKPRWEDTLLSQYPSFNFKDPSFFLLYLKHQNNAFLSLRFFHWLCSSCG-F 109

Query: 33  SPDQSSLNALF 1
           SPDQSS N LF
Sbjct: 110 SPDQSSCNVLF 120


>ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519059|gb|AET00683.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 861

 Score =  110 bits (274), Expect = 2e-22
 Identities = 60/101 (59%), Positives = 64/101 (63%)
 Frame = -1

Query: 303 FRNLTTETKQGDCHCPTQNPDAKDSNFTLIVKEICRITRTKPRWENTLLSQYXXXXXXXX 124
           FRNLTTET        T   D KD NFT  + EIC ITR+KPRWENTL+SQY        
Sbjct: 13  FRNLTTET--------TTKQDPKDQNFTQTLNEICTITRSKPRWENTLISQYPSFNFSNP 64

Query: 123 XXXXSYLNHQNNAFLSLRFFHWLCSSHPIFSPDQSSLNALF 1
               SYL HQNN FLSLRF HWL +SH  F PDQSS NALF
Sbjct: 65  KFFLSYLKHQNNTFLSLRFLHWL-TSHCGFKPDQSSCNALF 104


>emb|CBI26162.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score = 75.5 bits (184), Expect = 6e-12
 Identities = 51/134 (38%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
 Frame = -1

Query: 393 RGTPSFSLGPFLRQISAPTHRNC---SGSEIAQFRNLTTETKQGDCHCPTQNPDAKDSNF 223
           R + S S+  FLRQ      RN    SG++          T+Q               + 
Sbjct: 48  RPSSSSSVISFLRQNPNSRIRNLGVVSGNQYGDVEGAHQHTQQ-------------QQHL 94

Query: 222 TLIVKEICRITRTKPRWENTLLSQYXXXXXXXXXXXXSYLNHQNNAFLSLRFFHWLCSSH 43
             IVK +  ITRT+PRWE TLLS +             ++ HQ NA +SLRFFHWL SS 
Sbjct: 95  EEIVKRVSDITRTRPRWEQTLLSDFPSFNFLDPTFLSHFVEHQKNALISLRFFHWL-SSQ 153

Query: 42  PIFSPDQSSLNALF 1
             FSPD SS N LF
Sbjct: 154 SGFSPDSSSCNVLF 167


>gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 41/111 (36%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
 Frame = -1

Query: 309 AQFRNLTTETKQGDCHCPTQ--------NPDAKDSNFTLIVKEICRITRTKPRWENTLLS 154
           AQ RNL+ + K G               + D    N+T + K +  ITR KPRWE TL+S
Sbjct: 22  AQLRNLSVDGKDGVSEAEGSGSIGGERVSQDISRRNYTEMAKIVATITREKPRWEQTLVS 81

Query: 153 QYXXXXXXXXXXXXSYLNHQNNAFLSLRFFHWLCSSHPIFSPDQSSLNALF 1
            +              +  QNN  LSLRFF WLC++H   +PD  S N LF
Sbjct: 82  DFPSFNFADPLFFRELVATQNNVLLSLRFFQWLCTNHDC-TPDPISSNMLF 131


>ref|XP_002873920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319757|gb|EFH50179.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 483

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
 Frame = -1

Query: 309 AQFRNLTTETKQGDCHCPTQNPDAKDS--NFTLIVKEICRITRTKPRWENTLLSQYXXXX 136
           AQ R+LT E++  +       PD + S  ++T + K +  I R + RW+ TL+S +    
Sbjct: 22  AQIRSLTVESRDSE-----SKPDEQKSAVSYTEMAKTVSTIMRQRQRWQQTLVSDFPSFD 76

Query: 135 XXXXXXXXSYLNHQNNAFLSLRFFHWLCSSHPIFSPDQSSLNALF 1
                     L  QNN   SL FF WLCS++  ++PD  SLN LF
Sbjct: 77  FADPLFFRQLLKSQNNVMFSLWFFRWLCSNYD-YTPDSVSLNLLF 120