BLASTX nr result

ID: Glycyrrhiza23_contig00018888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018888
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556575.1| PREDICTED: sacsin-like [Glycine max]              243   2e-62
ref|XP_003533689.1| PREDICTED: sacsin-like [Glycine max]              243   2e-62
ref|NP_197702.1| C3HC4-type RING finger domain-containing protei...   233   9e-60
emb|CBI27138.3| unnamed protein product [Vitis vinifera]              233   2e-59
ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyra...   232   2e-59

>ref|XP_003556575.1| PREDICTED: sacsin-like [Glycine max]
          Length = 4756

 Score =  243 bits (619), Expect = 2e-62
 Identities = 121/139 (87%), Positives = 124/139 (89%)
 Frame = -1

Query: 417 ALLAYNDAVFTEEDFVXXXXXXXXXKHGQAWKTGRFGVGFNSVYHLTDLPSFVSGKYVVL 238
           ALLA+NDAVFTEEDFV         KHGQA KTGRFGVGFNSVYHLTDLPSFVS KYVVL
Sbjct: 78  ALLAFNDAVFTEEDFVSISKIGGSTKHGQASKTGRFGVGFNSVYHLTDLPSFVSHKYVVL 137

Query: 237 FDPQGVYLPRVSAANPGKRIDFTSSSALSSYKDQFFPYCAFGCDMQSPFSGTLFRFPLRN 58
           FDPQGVYLPRVSAANPGKRIDFT SSA S Y+DQF PYCAFGCDMQSPFSGTLFRFPLRN
Sbjct: 138 FDPQGVYLPRVSAANPGKRIDFTGSSAFSFYRDQFSPYCAFGCDMQSPFSGTLFRFPLRN 197

Query: 57  ADQAARSKLSRQAYSPEDI 1
           ADQAA+SKLSRQAYSPEDI
Sbjct: 198 ADQAAKSKLSRQAYSPEDI 216



 Score =  145 bits (365), Expect = 4e-33
 Identities = 69/139 (49%), Positives = 91/139 (65%)
 Frame = -1

Query: 417  ALLAYNDAVFTEEDFVXXXXXXXXXKHGQAWKTGRFGVGFNSVYHLTDLPSFVSGKYVVL 238
            AL  +ND+VF+ +D           K  +A+  GRFG+GFN VYH TD+P FVSG+ VV+
Sbjct: 1445 ALYCFNDSVFSPQDLYAISRIGQESKLEKAFAIGRFGLGFNCVYHFTDIPMFVSGENVVM 1504

Query: 237  FDPQGVYLPRVSAANPGKRIDFTSSSALSSYKDQFFPYCAFGCDMQSPFSGTLFRFPLRN 58
            FDP    LP +S ++PG RI F     L  + DQF P   FGCD+Q PF GTLFRFPLR 
Sbjct: 1505 FDPHASNLPGISPSHPGLRIKFVGQQILEQFPDQFSPLLHFGCDLQHPFPGTLFRFPLRT 1564

Query: 57   ADQAARSKLSRQAYSPEDI 1
            A  A+RS++ ++AY+PED+
Sbjct: 1565 AGLASRSQIKKEAYTPEDV 1583


>ref|XP_003533689.1| PREDICTED: sacsin-like [Glycine max]
          Length = 4760

 Score =  243 bits (619), Expect = 2e-62
 Identities = 122/139 (87%), Positives = 124/139 (89%)
 Frame = -1

Query: 417 ALLAYNDAVFTEEDFVXXXXXXXXXKHGQAWKTGRFGVGFNSVYHLTDLPSFVSGKYVVL 238
           ALLA+NDAVFTEEDFV         KHGQA KTGRFGVGFNSVYHLTDLPSFVSGKYVVL
Sbjct: 78  ALLAFNDAVFTEEDFVSISKIGGSTKHGQASKTGRFGVGFNSVYHLTDLPSFVSGKYVVL 137

Query: 237 FDPQGVYLPRVSAANPGKRIDFTSSSALSSYKDQFFPYCAFGCDMQSPFSGTLFRFPLRN 58
           FDPQGVYLPRVSAANPGKRIDFT SSALS Y+DQF PYCAFGCDMQSPFSGTLFRFPLRN
Sbjct: 138 FDPQGVYLPRVSAANPGKRIDFTGSSALSFYRDQFSPYCAFGCDMQSPFSGTLFRFPLRN 197

Query: 57  ADQAARSKLSRQAYSPEDI 1
           A QAA SKLSRQAYSPEDI
Sbjct: 198 AYQAATSKLSRQAYSPEDI 216



 Score =  146 bits (368), Expect = 2e-33
 Identities = 70/139 (50%), Positives = 91/139 (65%)
 Frame = -1

Query: 417  ALLAYNDAVFTEEDFVXXXXXXXXXKHGQAWKTGRFGVGFNSVYHLTDLPSFVSGKYVVL 238
            AL  YND+VF+ +D           K  +A+  GRFG+GFN VYH TD+P FVSG+ VV+
Sbjct: 1446 ALYCYNDSVFSPQDLYAISRIGQESKLEKAFAIGRFGLGFNCVYHFTDIPMFVSGENVVM 1505

Query: 237  FDPQGVYLPRVSAANPGKRIDFTSSSALSSYKDQFFPYCAFGCDMQSPFSGTLFRFPLRN 58
            FDP    LP +S ++PG RI F     L  + DQF P   FGCD+Q PF GTLFRFPLR 
Sbjct: 1506 FDPHASNLPGISPSHPGLRIKFVGRQILEQFPDQFSPLLHFGCDLQHPFPGTLFRFPLRT 1565

Query: 57   ADQAARSKLSRQAYSPEDI 1
            A  A+RS++ ++AY+PED+
Sbjct: 1566 AGVASRSQIKKEAYTPEDV 1584


>ref|NP_197702.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
           thaliana] gi|9759369|dbj|BAB09828.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332005740|gb|AED93123.1| C3HC4-type RING finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 4706

 Score =  233 bits (595), Expect = 9e-60
 Identities = 111/139 (79%), Positives = 120/139 (86%)
 Frame = -1

Query: 417 ALLAYNDAVFTEEDFVXXXXXXXXXKHGQAWKTGRFGVGFNSVYHLTDLPSFVSGKYVVL 238
           +LLAYNDAVFTEEDFV         KHGQAWKTGRFGVGFNSVYHLTD+PSFVSGKYVVL
Sbjct: 74  SLLAYNDAVFTEEDFVSISRIGGSGKHGQAWKTGRFGVGFNSVYHLTDIPSFVSGKYVVL 133

Query: 237 FDPQGVYLPRVSAANPGKRIDFTSSSALSSYKDQFFPYCAFGCDMQSPFSGTLFRFPLRN 58
           FDPQG YLP +SAANPGKRID+  SSALS YKDQF PYCAFGCDM+SPF+GTLFRFPLRN
Sbjct: 134 FDPQGAYLPNISAANPGKRIDYVGSSALSQYKDQFLPYCAFGCDMRSPFNGTLFRFPLRN 193

Query: 57  ADQAARSKLSRQAYSPEDI 1
            +QAA S+LSRQAY  +DI
Sbjct: 194 TEQAASSRLSRQAYFEDDI 212



 Score =  140 bits (353), Expect = 1e-31
 Identities = 65/139 (46%), Positives = 89/139 (64%)
 Frame = -1

Query: 417  ALLAYNDAVFTEEDFVXXXXXXXXXKHGQAWKTGRFGVGFNSVYHLTDLPSFVSGKYVVL 238
            AL  +N++VFT++D           K  + +  GRFG+GFN VYH TD+P FVSG+ +V+
Sbjct: 1446 ALYCFNNSVFTQQDMYAISRIGQASKLEKPFAIGRFGLGFNCVYHFTDIPGFVSGENIVM 1505

Query: 237  FDPQGVYLPRVSAANPGKRIDFTSSSALSSYKDQFFPYCAFGCDMQSPFSGTLFRFPLRN 58
            FDP   +LP +S  +PG RI F     L  + DQF P+  FGCD++  F GTLFRFPLRN
Sbjct: 1506 FDPHANHLPGISPTHPGLRIKFAGRYILDQFPDQFAPFLHFGCDLEHTFPGTLFRFPLRN 1565

Query: 57   ADQAARSKLSRQAYSPEDI 1
            A  A RS + ++ Y+PED+
Sbjct: 1566 ASVAPRSHIKKETYAPEDV 1584


>emb|CBI27138.3| unnamed protein product [Vitis vinifera]
          Length = 3960

 Score =  233 bits (593), Expect = 2e-59
 Identities = 114/139 (82%), Positives = 120/139 (86%)
 Frame = -1

Query: 417 ALLAYNDAVFTEEDFVXXXXXXXXXKHGQAWKTGRFGVGFNSVYHLTDLPSFVSGKYVVL 238
           ALLAYN+A FTEEDFV         KHGQAWKTGRFGVGFNSVYHLTDLPSFVSGKYVVL
Sbjct: 85  ALLAYNNAEFTEEDFVSISRIGGSNKHGQAWKTGRFGVGFNSVYHLTDLPSFVSGKYVVL 144

Query: 237 FDPQGVYLPRVSAANPGKRIDFTSSSALSSYKDQFFPYCAFGCDMQSPFSGTLFRFPLRN 58
           FDPQGVYLP VS ANPGKRI++ SSSA+S YKDQF PYCAFGCDM+ PFSGTLFRFPLRN
Sbjct: 145 FDPQGVYLPNVSTANPGKRIEYVSSSAISLYKDQFLPYCAFGCDMKHPFSGTLFRFPLRN 204

Query: 57  ADQAARSKLSRQAYSPEDI 1
           ADQAA SKLSRQAY  +DI
Sbjct: 205 ADQAAISKLSRQAYLEDDI 223



 Score =  108 bits (271), Expect = 3e-22
 Identities = 46/92 (50%), Positives = 67/92 (72%)
 Frame = -1

Query: 276  DLPSFVSGKYVVLFDPQGVYLPRVSAANPGKRIDFTSSSALSSYKDQFFPYCAFGCDMQS 97
            D+P+FVSG+ +V+FDP    LP +S ++PG RI +     L  + DQF P+  FGCD+Q+
Sbjct: 998  DIPTFVSGENIVMFDPHACNLPGISPSHPGLRIRYVGRRILEQFPDQFSPFLHFGCDLQN 1057

Query: 96   PFSGTLFRFPLRNADQAARSKLSRQAYSPEDI 1
            PF GTLFRFPLR+A  A+RS++ ++ Y+PED+
Sbjct: 1058 PFPGTLFRFPLRSASVASRSQIKKEGYAPEDV 1089


>ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317873|gb|EFH48295.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 4711

 Score =  232 bits (592), Expect = 2e-59
 Identities = 111/139 (79%), Positives = 119/139 (85%)
 Frame = -1

Query: 417 ALLAYNDAVFTEEDFVXXXXXXXXXKHGQAWKTGRFGVGFNSVYHLTDLPSFVSGKYVVL 238
           +LLAYNDAVFTEEDFV         KHGQAWKTGRFGVGFNSVYHLTD+PSFVSGKYVVL
Sbjct: 74  SLLAYNDAVFTEEDFVSISRIGGSGKHGQAWKTGRFGVGFNSVYHLTDIPSFVSGKYVVL 133

Query: 237 FDPQGVYLPRVSAANPGKRIDFTSSSALSSYKDQFFPYCAFGCDMQSPFSGTLFRFPLRN 58
           FDPQG YLP +SAANPGKRID+  SSALS YKDQF PYCAFGCDM+SPF GTLFRFPLRN
Sbjct: 134 FDPQGAYLPNISAANPGKRIDYVGSSALSQYKDQFLPYCAFGCDMRSPFHGTLFRFPLRN 193

Query: 57  ADQAARSKLSRQAYSPEDI 1
            +QAA S+LSRQAY  +DI
Sbjct: 194 PEQAASSRLSRQAYFEDDI 212



 Score =  138 bits (348), Expect = 4e-31
 Identities = 64/139 (46%), Positives = 89/139 (64%)
 Frame = -1

Query: 417  ALLAYNDAVFTEEDFVXXXXXXXXXKHGQAWKTGRFGVGFNSVYHLTDLPSFVSGKYVVL 238
            AL  +N++VFT++D           K  + +  GRFG+GFN VYH TD+P FVSG+ +V+
Sbjct: 1446 ALYCFNNSVFTQQDMYAISRIGQASKLEKPFAIGRFGLGFNCVYHFTDIPGFVSGENIVM 1505

Query: 237  FDPQGVYLPRVSAANPGKRIDFTSSSALSSYKDQFFPYCAFGCDMQSPFSGTLFRFPLRN 58
            FDP   +LP +S  +PG RI F   + L  + DQF P+  FGCD++  F GTLFRFPLRN
Sbjct: 1506 FDPHANHLPGISPTHPGLRIKFAGRNILDQFPDQFAPFLHFGCDLEHTFPGTLFRFPLRN 1565

Query: 57   ADQAARSKLSRQAYSPEDI 1
            A  A RS + ++ Y+ ED+
Sbjct: 1566 ASVAPRSHIKKETYASEDV 1584


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