BLASTX nr result

ID: Glycyrrhiza23_contig00018859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018859
         (1643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602781.1| RNA pseudourine synthase [Medicago truncatul...   676   0.0  
ref|XP_003526941.1| PREDICTED: RNA pseudourine synthase 7-like [...   668   0.0  
ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like i...   580   e-163
emb|CBI15710.3| unnamed protein product [Vitis vinifera]              576   e-162
ref|XP_004138251.1| PREDICTED: RNA pseudourine synthase 7-like [...   572   e-160

>ref|XP_003602781.1| RNA pseudourine synthase [Medicago truncatula]
            gi|355491829|gb|AES73032.1| RNA pseudourine synthase
            [Medicago truncatula]
          Length = 380

 Score =  676 bits (1743), Expect = 0.0
 Identities = 323/368 (87%), Positives = 338/368 (91%)
 Frame = -3

Query: 1551 DIVWQTPANPPQPQDYIIRNGIRFVRPYYFEFIAHVKDRWAGKTIVDLFAEEFKGRPCEY 1372
            DIVWQTPANPP PQDYI+RNGIRFVRPYYFEFIAHVK+RWAGKTIVDLFAEEFKGRP EY
Sbjct: 13   DIVWQTPANPPLPQDYIVRNGIRFVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEY 72

Query: 1371 YVSAVKCGRIQVDGEMVPVSYIVKPSQKISHFLHRHEPPVMACDVPILQKEPDVLTVCKP 1192
            YVSAVKCGRIQVDGEMVPVSY+VK SQKISHFLHRHEPPVMACDVPIL KEPDVLTVCKP
Sbjct: 73   YVSAVKCGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMACDVPILHKEPDVLTVCKP 132

Query: 1191 ASVPVHPCGQYRKNTVVGILQAEYGLAPLFPVHRLDRLVSGLLILARNAPKADIFRQQIE 1012
            ASVPVHPCGQYRKNTVVGILQAE+GLAPLFPVHRLDRLVSGLLI+ARNA KAD FRQ+IE
Sbjct: 133  ASVPVHPCGQYRKNTVVGILQAEHGLAPLFPVHRLDRLVSGLLIIARNATKADSFRQEIE 192

Query: 1011 AGLVQKQYIAKVVGEFPKDELIVDANIDYNAREGRSTAEVRDSVKGKTASTKFTQISSNG 832
            AGLV+KQYIAKVVGEFP+DE+IVDANIDYNAREGRSTAEVRDS KGK ASTKFT+ISSNG
Sbjct: 193  AGLVKKQYIAKVVGEFPEDEIIVDANIDYNAREGRSTAEVRDSTKGKVASTKFTRISSNG 252

Query: 831  THSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYISEQTVDQSIKGXXXXXXXXXXXXSL 652
            THSIVLCEP+TGRTHQIRVHLQ SGHPIANDMLYISEQTVD+SI G            SL
Sbjct: 253  THSIVLCEPVTGRTHQIRVHLQSSGHPIANDMLYISEQTVDRSINGSTADRSACISDASL 312

Query: 651  TSNFADEVPNECQENSNGDFTFDPMCTNCPNLAPKGYDGDEEGLWLHCFRYSGPGWTYEC 472
            TSNF ++VP + QENSN DF  DPMCTNCPNLAPKGYD DEEGLWLHC RYSGPGWTYEC
Sbjct: 313  TSNFGEKVPKDYQENSNEDFRIDPMCTNCPNLAPKGYDTDEEGLWLHCMRYSGPGWTYEC 372

Query: 471  PYPDWAKL 448
            PYPDWAKL
Sbjct: 373  PYPDWAKL 380


>ref|XP_003526941.1| PREDICTED: RNA pseudourine synthase 7-like [Glycine max]
          Length = 381

 Score =  668 bits (1724), Expect = 0.0
 Identities = 319/368 (86%), Positives = 336/368 (91%)
 Frame = -3

Query: 1551 DIVWQTPANPPQPQDYIIRNGIRFVRPYYFEFIAHVKDRWAGKTIVDLFAEEFKGRPCEY 1372
            +IVWQTPANPP P DY+ RNGIR+VRPYYFEFIAHVK+RWAGKTIVDLFAEEFKGRP EY
Sbjct: 13   NIVWQTPANPPHPNDYVFRNGIRYVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEY 72

Query: 1371 YVSAVKCGRIQVDGEMVPVSYIVKPSQKISHFLHRHEPPVMACDVPILQKEPDVLTVCKP 1192
            YVSAVKCGRIQVDGEMVPVSYIVK SQKISHFLHRHEPPVMAC+VP+LQK+ DVLTVCKP
Sbjct: 73   YVSAVKCGRIQVDGEMVPVSYIVKSSQKISHFLHRHEPPVMACEVPVLQKDIDVLTVCKP 132

Query: 1191 ASVPVHPCGQYRKNTVVGILQAEYGLAPLFPVHRLDRLVSGLLILARNAPKADIFRQQIE 1012
            ASVPVHPCGQYRKNTVVGILQAE+GL PLFPVHRLDRLVSGLLILARNA KADIFRQQIE
Sbjct: 133  ASVPVHPCGQYRKNTVVGILQAEHGLTPLFPVHRLDRLVSGLLILARNAAKADIFRQQIE 192

Query: 1011 AGLVQKQYIAKVVGEFPKDELIVDANIDYNAREGRSTAEVRDSVKGKTASTKFTQISSNG 832
            AGLV KQYIAKV GEFP+DE+IVDANIDYNAREGRSTAEVR S KGK ASTKFT+IS+NG
Sbjct: 193  AGLVHKQYIAKVGGEFPEDEVIVDANIDYNAREGRSTAEVRGSAKGKAASTKFTRISTNG 252

Query: 831  THSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYISEQTVDQSIKGXXXXXXXXXXXXSL 652
            T SIVLCEPITGRTHQIRVHLQYSGHPIANDMLYISEQTVD+S+KG            SL
Sbjct: 253  TQSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYISEQTVDRSVKGLSADRSARISGVSL 312

Query: 651  TSNFADEVPNECQENSNGDFTFDPMCTNCPNLAPKGYDGDEEGLWLHCFRYSGPGWTYEC 472
            TSNF ++V NEC+ENSNGDF  DPMCTNCPNLAPKGYD DEEGLWLHC RYSGPGWTYEC
Sbjct: 313  TSNFNEKVLNECEENSNGDFGIDPMCTNCPNLAPKGYDSDEEGLWLHCIRYSGPGWTYEC 372

Query: 471  PYPDWAKL 448
            PYPDWAKL
Sbjct: 373  PYPDWAKL 380


>ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like isoform 2 [Vitis vinifera]
            gi|359491114|ref|XP_002280549.2| PREDICTED: RNA
            pseudourine synthase 7-like isoform 1 [Vitis vinifera]
          Length = 386

 Score =  580 bits (1496), Expect = e-163
 Identities = 279/375 (74%), Positives = 313/375 (83%), Gaps = 6/375 (1%)
 Frame = -3

Query: 1551 DIVWQTPANPPQPQDYIIRNGIRFVRPYYFEFIAHVKDRWAGKTIVDLFAEEFKGRPCEY 1372
            +IVWQTPANPP+  DYI RNG R VRPYYFEFI+HVK+RWAGKTIVDLF EEFKGRP +Y
Sbjct: 12   EIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFTEEFKGRPYDY 71

Query: 1371 YVSAVKCGRIQVDGEMVPVSYIVKPSQKISHFLHRHEPPVMACDVPILQKEPDVLTVCKP 1192
            YV+AV+ GRIQVDGEMVPVSYIV+ SQKISHF+HRHEPPV+A DV +LQKEPDVLT+CKP
Sbjct: 72   YVNAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQKEPDVLTICKP 131

Query: 1191 ASVPVHPCGQYRKNTVVGILQAEYGLAPLFPVHRLDRLVSGLLILARNAPKADIFRQQIE 1012
            ASVPVHPCGQYRKNTVVGILQAE+GLAPLFP+HRLDRLVSGLLILAR+A KAD FRQQIE
Sbjct: 132  ASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSASKADSFRQQIE 191

Query: 1011 AGLVQKQYIAKVVGEFPKDELIVDANIDYNAREGRSTAEV-----RDSVKGKTASTKFTQ 847
            AG+VQKQYIAKV G FP DE +V+ N++YNAREGRST EV        +KGK+A TKFT+
Sbjct: 192  AGMVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTVEVGNCCGNTPLKGKSACTKFTR 251

Query: 846  ISSNGTHSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYISEQTVDQSIKGXXXXXXXXX 667
            IS+NGTHSIVLCEPITGRTHQIRVHLQY+GHPIANDMLY+SE +VD+S KG         
Sbjct: 252  ISTNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEFSVDRSTKGLSADRAAAN 311

Query: 666  XXXSLTSNFADEVPNE-CQENSNGDFTFDPMCTNCPNLAPKGYDGDEEGLWLHCFRYSGP 490
               SL S+      +E C +NS  DF+ DPMCTNCPNL PKGYD DEEGLWLHC RY GP
Sbjct: 312  SGCSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGYDEDEEGLWLHCIRYCGP 371

Query: 489  GWTYECPYPDWAKLD 445
             W YECP+P+WA  D
Sbjct: 372  DWVYECPHPEWASHD 386


>emb|CBI15710.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  576 bits (1484), Expect = e-162
 Identities = 277/373 (74%), Positives = 311/373 (83%), Gaps = 4/373 (1%)
 Frame = -3

Query: 1551 DIVWQTPANPPQPQDYIIRNGIRFVRPYYFEFIAHVKDRWAGKTIVDLFAEEFKGRPCEY 1372
            +IVWQTPANPP+  DYI RNG R VRPYYFEFI+HVK+RWAGKTIVDLF EEFKGRP +Y
Sbjct: 2    EIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFTEEFKGRPYDY 61

Query: 1371 YVSAVKCGRIQVDGEMVPVSYIVKPSQKISHFLHRHEPPVMACDVPILQKEPDVLTVCKP 1192
            YV+AV+ GRIQVDGEMVPVSYIV+ SQKISHF+HRHEPPV+A DV +LQKEPDVLT+CKP
Sbjct: 62   YVNAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQKEPDVLTICKP 121

Query: 1191 ASVPVHPCGQYRKNTVVGILQAEYGLAPLFPVHRLDRLVSGLLILARNAPKADIFRQQIE 1012
            ASVPVHPCGQYRKNTVVGILQAE+GLAPLFP+HRLDRLVSGLLILAR+A KAD FRQQIE
Sbjct: 122  ASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSASKADSFRQQIE 181

Query: 1011 AGLVQKQYIAKVVGEFPKDELIVDANIDYNAREGRSTAE---VRDSVKGKTASTKFTQIS 841
            AG+VQKQYIAKV G FP DE +V+ N++YNAREGRST         +KGK+A TKFT+IS
Sbjct: 182  AGMVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTVGNCCGNTPLKGKSACTKFTRIS 241

Query: 840  SNGTHSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYISEQTVDQSIKGXXXXXXXXXXX 661
            +NGTHSIVLCEPITGRTHQIRVHLQY+GHPIANDMLY+SE +VD+S KG           
Sbjct: 242  TNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEFSVDRSTKGLSADRAAANSG 301

Query: 660  XSLTSNFADEVPNE-CQENSNGDFTFDPMCTNCPNLAPKGYDGDEEGLWLHCFRYSGPGW 484
             SL S+      +E C +NS  DF+ DPMCTNCPNL PKGYD DEEGLWLHC RY GP W
Sbjct: 302  CSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGYDEDEEGLWLHCIRYCGPDW 361

Query: 483  TYECPYPDWAKLD 445
             YECP+P+WA  D
Sbjct: 362  VYECPHPEWASHD 374


>ref|XP_004138251.1| PREDICTED: RNA pseudourine synthase 7-like [Cucumis sativus]
            gi|449501468|ref|XP_004161375.1| PREDICTED: RNA
            pseudourine synthase 7-like [Cucumis sativus]
          Length = 393

 Score =  572 bits (1473), Expect = e-160
 Identities = 273/373 (73%), Positives = 312/373 (83%), Gaps = 5/373 (1%)
 Frame = -3

Query: 1548 IVWQTPANPPQPQDYIIRNGIRFVRPYYFEFIAHVKDRWAGKTIVDLFAEEFKGRPCEYY 1369
            IVWQTP NPPQ  DYI  NG R VRPYYFEFIAHVK+RWAGKTIVDLFAEEFKGRP EYY
Sbjct: 21   IVWQTPDNPPQRSDYIFHNGRRHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYY 80

Query: 1368 VSAVKCGRIQVDGEMVPVSYIVKPSQKISHFLHRHEPPVMACDVPILQKEPDVLTVCKPA 1189
            V AV+CGRIQVDGEMVPVSYIVK SQKISHFLHRHEPPVMA  V +L++E +VLTVCKPA
Sbjct: 81   VDAVECGRIQVDGEMVPVSYIVKSSQKISHFLHRHEPPVMAWGVKVLKEEEEVLTVCKPA 140

Query: 1188 SVPVHPCGQYRKNTVVGILQAEYGLAPLFPVHRLDRLVSGLLILARNAPKADIFRQQIEA 1009
            SVPVHPCGQYRKNTVVGIL+AE+GLAPLFP+HRLDRLVSGLLILARNA KAD+FRQQIE+
Sbjct: 141  SVPVHPCGQYRKNTVVGILEAEHGLAPLFPIHRLDRLVSGLLILARNASKADLFRQQIES 200

Query: 1008 GLVQKQYIAKVVGEFPKDELIVDANIDYNAREGRSTAEVRDS-----VKGKTASTKFTQI 844
            GLV+KQYIA+VVG FP++E +VDANI+YN REGRSTAE+ DS      KGK A TKFT+I
Sbjct: 201  GLVKKQYIARVVGVFPEEEQVVDANINYNPREGRSTAEMVDSSTDTRTKGKAAQTKFTRI 260

Query: 843  SSNGTHSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYISEQTVDQSIKGXXXXXXXXXX 664
            SS+G HSIV CEPITGRTHQIRVHLQY+G+PIAND LY++++   +S++           
Sbjct: 261  SSDGVHSIVSCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASGRSVQKTTADRAAAIS 320

Query: 663  XXSLTSNFADEVPNECQENSNGDFTFDPMCTNCPNLAPKGYDGDEEGLWLHCFRYSGPGW 484
              S   +  ++  N C+EN + DF  DPMCTNCPNLAPKGY+G+EEGLWLHC +YSGPGW
Sbjct: 321  FCSPARDVQEDCANACKENWSEDFGIDPMCTNCPNLAPKGYEGEEEGLWLHCVQYSGPGW 380

Query: 483  TYECPYPDWAKLD 445
             YECPYP+WA L+
Sbjct: 381  IYECPYPEWASLE 393


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