BLASTX nr result

ID: Glycyrrhiza23_contig00018841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018841
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621832.1| S-locus F-Box protein c [Medicago truncatula...   120   1e-25
ref|XP_004159645.1| PREDICTED: F-box protein CPR30-like [Cucumis...    99   5e-19
gb|ABR18786.1| class S F-box protein [Nicotiana alata]                 95   9e-18
dbj|BAJ11965.1| MdFBX17 [Malus x domestica]                            94   2e-17
gb|ACH87163.1| F-box protein FB1 [Malus x domestica]                   92   4e-17

>ref|XP_003621832.1| S-locus F-Box protein c [Medicago truncatula]
           gi|355496847|gb|AES78050.1| S-locus F-Box protein c
           [Medicago truncatula]
          Length = 265

 Score =  120 bits (302), Expect = 1e-25
 Identities = 70/166 (42%), Positives = 94/166 (56%), Gaps = 4/166 (2%)
 Frame = +1

Query: 79  YRIEEYALSTDSWTMLHDTNAGLFLFGTDCFAMCFKRTYYWWAFNREDMSSVILALDMGD 258
           Y +EEY L +DSW  +   N     F T CFAM F   YYWW    + ++S IL LD+G 
Sbjct: 69  YIVEEYDLRSDSWRTIESVNPWCCEFDTSCFAMHFNGVYYWWG-EIKGLTSTILTLDVGG 127

Query: 259 EVFQRVPTPPHVDLSEPDGRSLAMLNDSISLIC---CTYHGNGVTTSIDIWVMDGFGA-E 426
               ++P P  VD+S   GR L +L+  I+L+C   C  + N       IWV  G  A +
Sbjct: 128 GFLHKMPLPKVVDISTSSGRYLGVLHGCITLVCRKLCDQNAN-----FCIWVFGGSCAGD 182

Query: 427 GSWTRMWTVKHLRGEPKPLVFWKGNELLMEMSCGKLKSYNVDTQEI 564
             WT++ T++H      PLVFWKGNELL++M   K+ SYNVDT+EI
Sbjct: 183 SCWTKLRTIEH-SSSCVPLVFWKGNELLLKM-FDKVISYNVDTEEI 226


>ref|XP_004159645.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
          Length = 383

 Score = 99.0 bits (245), Expect = 5e-19
 Identities = 68/188 (36%), Positives = 97/188 (51%), Gaps = 4/188 (2%)
 Frame = +1

Query: 13  DYKVIRIWKVDTCGNNGGVFSTYRIEEYALSTDSWTMLHDTNAGLFLFGTDCFAMCFKRT 192
           D+KV+R+  VD      G F   R+E Y LS D W  +     G  +F   CF M  + T
Sbjct: 169 DFKVVRV--VDFV-EGPGYFYPPRVEVYDLSKDRWREIESPVCG-HVFWAPCFEMFHEGT 224

Query: 193 YYWWAF--NREDMSSVILALDMGDEVFQRVPTPPHVDLSEPDGRSLAMLNDSISLICCTY 366
           YYWWA   N E  + +I   DM +EVF R+P P   + +    RSL +L+  I L    Y
Sbjct: 225 YYWWAMTGNTEGNTEIIQTFDMSEEVFGRIPVPESFEGTGDRYRSLGVLDGCIVLF--HY 282

Query: 367 HGNGVTTSIDIWVM--DGFGAEGSWTRMWTVKHLRGEPKPLVFWKGNELLMEMSCGKLKS 540
              G   S D+W M  D +G   SW+++ T+  + G  KPL+F    ELLME + G++  
Sbjct: 283 PSRGDERSFDMWEMAKDEWGGV-SWSKVLTIGPVCGIEKPLLFVSCEELLMEGNGGQVIV 341

Query: 541 YNVDTQEI 564
           YN+ + E+
Sbjct: 342 YNIKSGEV 349


>gb|ABR18786.1| class S F-box protein [Nicotiana alata]
          Length = 388

 Score = 94.7 bits (234), Expect = 9e-18
 Identities = 58/191 (30%), Positives = 99/191 (51%), Gaps = 4/191 (2%)
 Frame = +1

Query: 4   ITDDYKVIRIWKVDTCGNNGGVFSTYRIEEYALSTDSWTMLHDTNAGL-FLFGTDCFAMC 180
           I +DYK +RI +V      G      ++E Y L +DSW  L+  +  L  +F   CF M 
Sbjct: 169 IGNDYKFVRISEVFLDTYWGPEEREQKVEVYDLRSDSWRDLNHVDQQLPTIFWNQCFEML 228

Query: 181 FKRTYYWWAFNREDMSSVILALDMGDEVFQRVPTPPHVDLSEPDGRSLAMLNDSISLICC 360
               ++W+A    D++  IL  D   E+F+ +  P   +  +    SLA++N+S++LIC 
Sbjct: 229 HNGAFHWYAVG--DLTYEILCFDFSTEIFRSMKMPESCNAYDGKRYSLAVVNESLTLICY 286

Query: 361 TYHGNGV---TTSIDIWVMDGFGAEGSWTRMWTVKHLRGEPKPLVFWKGNELLMEMSCGK 531
               + +     ++DIW+M  +G   SWT+ + +  L  E  PL  W+ + LL++   G+
Sbjct: 287 PSPDSEIDQTQNTMDIWIMMEYGVNESWTKKYIISPLPIE-SPLTIWRDHLLLLQSKTGQ 345

Query: 532 LKSYNVDTQEI 564
           L SYN+ + E+
Sbjct: 346 LISYNLRSNEV 356


>dbj|BAJ11965.1| MdFBX17 [Malus x domestica]
          Length = 393

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 9/191 (4%)
 Frame = +1

Query: 10  DDYKVIRIWKVDTCGNNGG-------VFSTYRIEEYALSTDSWTMLH-DTNAGLFLFGTD 165
           ++YKV++I  V+ C  +         +   Y  E Y  + + W  +  D ++    +   
Sbjct: 181 NEYKVVQI--VENCEYSDDEQTYQHCIAYPYTAEVYTTAANFWKEIKIDISSSTHPYP-- 236

Query: 166 CFAMCFKRTYYWWAFNREDMSSVILALDMGDEVFQRVPTPPHVDLSEPDGRSLAMLNDSI 345
            F++  K   YW+A + E+    IL+ D+GDE+F R+  P  ++ S  +   L + N+SI
Sbjct: 237 -FSVYLKGFCYWFATDGEEC---ILSFDLGDEIFHRIQLPSKIE-SGFNFCGLFLYNESI 291

Query: 346 SLICCTYHGNGVTTSIDIWVMDGFGA-EGSWTRMWTVKHLRGEPKPLVFWKGNELLMEMS 522
           +  CC Y  +  +   +IWVMDG+G  + SWT++ TV   +G   PL FWK NELLM  S
Sbjct: 292 TSYCCRYDPSEDSKLFEIWVMDGYGGVKNSWTKLLTVGPFKGIEYPLTFWKCNELLMVAS 351

Query: 523 CGKLKSYNVDT 555
             ++ SYN  T
Sbjct: 352 SRRVTSYNSST 362


>gb|ACH87163.1| F-box protein FB1 [Malus x domestica]
          Length = 393

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 61/191 (31%), Positives = 99/191 (51%), Gaps = 9/191 (4%)
 Frame = +1

Query: 10  DDYKVIRIWKVDTCGNNGG-------VFSTYRIEEYALSTDSWTMLH-DTNAGLFLFGTD 165
           ++YKV++I  V+ C  +         +   Y  E Y  + + W  +  D ++    +   
Sbjct: 181 NEYKVVQI--VENCEYSDDEQTYQHCIAYPYTAEVYTTAANFWKEIKIDISSSTHPYP-- 236

Query: 166 CFAMCFKRTYYWWAFNREDMSSVILALDMGDEVFQRVPTPPHVDLSEPDGRSLAMLNDSI 345
            F++  K   YW+A + E+    IL+ D+GDE+F R+  P  ++ S  +     + N+SI
Sbjct: 237 -FSVYLKGFCYWFATDGEEC---ILSFDLGDEIFHRIQLPSKIE-SGFNFCGFFLYNESI 291

Query: 346 SLICCTYHGNGVTTSIDIWVMDGFGA-EGSWTRMWTVKHLRGEPKPLVFWKGNELLMEMS 522
           +  CC Y  +  +   +IWVMDG+G  + SWT++ TV   +G   PL FWK NELLM  S
Sbjct: 292 TSYCCRYDPSEDSKLFEIWVMDGYGGVKNSWTKLLTVGPFKGIEYPLTFWKCNELLMVAS 351

Query: 523 CGKLKSYNVDT 555
             ++ SYN  T
Sbjct: 352 SRRVTSYNSST 362


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