BLASTX nr result

ID: Glycyrrhiza23_contig00018835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018835
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-l...   241   6e-62
ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-l...   224   6e-57
ref|XP_003519971.1| PREDICTED: polyadenylate-binding protein 5-l...   185   3e-45
ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat...   175   4e-42
emb|CBI29360.3| unnamed protein product [Vitis vinifera]              175   4e-42

>ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
           max]
          Length = 652

 Score =  241 bits (614), Expect = 6e-62
 Identities = 121/153 (79%), Positives = 127/153 (83%)
 Frame = +3

Query: 3   GVRRNGNIQQVQQNQMLHRNSNQGFRYMANNRNGMDPSVVPQGLVGQMMPMAFDGSGVTA 182
           GVRRNGN QQVQQNQMLHRNSNQGFRYM N RNGMDPS+VP GL+G MMPM FDGSGVTA
Sbjct: 490 GVRRNGNFQQVQQNQMLHRNSNQGFRYMPNGRNGMDPSLVPHGLMGPMMPMPFDGSGVTA 549

Query: 183 APIDNQHPGXXXXXXXXXXXXXXPENQRMMLGEHLYPLVDRLTPNQHTAKVTGMLLEMDQ 362
           AP DNQ PG              PENQRMMLGEHLYPLV+RL PNQ+TAKVTGMLLEMDQ
Sbjct: 550 APNDNQRPGALSTTLASALASATPENQRMMLGEHLYPLVERLAPNQYTAKVTGMLLEMDQ 609

Query: 363 SEVIHLIESPEDLKIKVSEALQVLREAASGSEV 461
           SEVI+LIESPEDLK KVSEA+QVL E ASGSEV
Sbjct: 610 SEVINLIESPEDLKTKVSEAMQVLHEVASGSEV 642


>ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
           max]
          Length = 642

 Score =  224 bits (571), Expect = 6e-57
 Identities = 114/146 (78%), Positives = 121/146 (82%), Gaps = 1/146 (0%)
 Frame = +3

Query: 3   GVRRNGNIQQVQQNQ-MLHRNSNQGFRYMANNRNGMDPSVVPQGLVGQMMPMAFDGSGVT 179
           GVRRNGN QQVQQNQ MLHRNSNQGFRYM N RNGMDPS+VP GL+G MMPM FDGSGVT
Sbjct: 490 GVRRNGNFQQVQQNQQMLHRNSNQGFRYMPNGRNGMDPSLVPHGLMGPMMPMPFDGSGVT 549

Query: 180 AAPIDNQHPGXXXXXXXXXXXXXXPENQRMMLGEHLYPLVDRLTPNQHTAKVTGMLLEMD 359
           AAP DNQ PG              PENQRMMLGEHLYPLV+RL PNQ+TAKVTGMLLEMD
Sbjct: 550 AAPNDNQRPGALSTTLASALASATPENQRMMLGEHLYPLVERLAPNQYTAKVTGMLLEMD 609

Query: 360 QSEVIHLIESPEDLKIKVSEALQVLR 437
           QSEVI+LIESPEDLK KVSEA+QVL+
Sbjct: 610 QSEVINLIESPEDLKTKVSEAMQVLQ 635


>ref|XP_003519971.1| PREDICTED: polyadenylate-binding protein 5-like [Glycine max]
          Length = 616

 Score =  185 bits (470), Expect = 3e-45
 Identities = 98/152 (64%), Positives = 111/152 (73%), Gaps = 3/152 (1%)
 Frame = +3

Query: 24  IQQVQQNQMLHRNSNQGFRYMANNRNGMDPSVVPQGLVGQMMPMAFDGSGVTAAPIDNQH 203
           ++ + +NQMLH NS+QGF YM N +NGMDPSVVP G+V  MMP+ FDGSG++AAP  NQH
Sbjct: 457 LRNLHRNQMLHLNSSQGFGYMGNGQNGMDPSVVPHGIVAPMMPLPFDGSGISAAPTYNQH 516

Query: 204 P-GXXXXXXXXXXXXXXPENQRMMLGEHLYPLVDRLTPNQH-TAKVTGMLLEMDQSEVIH 377
           P G              PENQ +ML EHLYPLVD +T N H T KVTGMLLEMDQSEVIH
Sbjct: 517 PGGSLSNTFASALASATPENQHLMLAEHLYPLVDEITKNHHQTEKVTGMLLEMDQSEVIH 576

Query: 378 LIESPEDLKIKVSEALQVLREAASGS-EVGDQ 470
           L ESPEDLKIKV EA+Q L EAA  S EVGDQ
Sbjct: 577 LTESPEDLKIKVFEAMQALGEAAPDSEEVGDQ 608


>ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
            [Vitis vinifera]
          Length = 1093

 Score =  175 bits (443), Expect = 4e-42
 Identities = 91/159 (57%), Positives = 117/159 (73%), Gaps = 3/159 (1%)
 Frame = +3

Query: 3    GVRRNGNIQQVQQNQ--MLHRNSNQGFRYMANNRNGMDPSVVPQGLVGQMMPMAFDGSGV 176
            GVRR GN QQ+Q  Q  +LHRNSNQ +RYMAN RNG+DPS+VPQGL+G +MP+ FD SG+
Sbjct: 928  GVRRGGNSQQMQHQQQPLLHRNSNQSYRYMANGRNGVDPSMVPQGLMGPVMPLPFDVSGM 987

Query: 177  TAAPIDNQHPG-XXXXXXXXXXXXXXPENQRMMLGEHLYPLVDRLTPNQHTAKVTGMLLE 353
              +P+D Q  G               P+NQR+MLGE L+PLV+R+   +   KVTGMLLE
Sbjct: 988  PVSPMDIQRTGPVPMSTLASALASTTPDNQRLMLGEQLFPLVERI-ERETAGKVTGMLLE 1046

Query: 354  MDQSEVIHLIESPEDLKIKVSEALQVLREAASGSEVGDQ 470
            MDQ+EV+HLIESP+ LK KV+EA+ VLR ++SG++VGDQ
Sbjct: 1047 MDQTEVLHLIESPDALKNKVAEAMDVLRASSSGNDVGDQ 1085


>emb|CBI29360.3| unnamed protein product [Vitis vinifera]
          Length = 633

 Score =  175 bits (443), Expect = 4e-42
 Identities = 91/159 (57%), Positives = 117/159 (73%), Gaps = 3/159 (1%)
 Frame = +3

Query: 3   GVRRNGNIQQVQQNQ--MLHRNSNQGFRYMANNRNGMDPSVVPQGLVGQMMPMAFDGSGV 176
           GVRR GN QQ+Q  Q  +LHRNSNQ +RYMAN RNG+DPS+VPQGL+G +MP+ FD SG+
Sbjct: 468 GVRRGGNSQQMQHQQQPLLHRNSNQSYRYMANGRNGVDPSMVPQGLMGPVMPLPFDVSGM 527

Query: 177 TAAPIDNQHPG-XXXXXXXXXXXXXXPENQRMMLGEHLYPLVDRLTPNQHTAKVTGMLLE 353
             +P+D Q  G               P+NQR+MLGE L+PLV+R+   +   KVTGMLLE
Sbjct: 528 PVSPMDIQRTGPVPMSTLASALASTTPDNQRLMLGEQLFPLVERI-ERETAGKVTGMLLE 586

Query: 354 MDQSEVIHLIESPEDLKIKVSEALQVLREAASGSEVGDQ 470
           MDQ+EV+HLIESP+ LK KV+EA+ VLR ++SG++VGDQ
Sbjct: 587 MDQTEVLHLIESPDALKNKVAEAMDVLRASSSGNDVGDQ 625


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