BLASTX nr result
ID: Glycyrrhiza23_contig00018830
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00018830
(706 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003533370.1| PREDICTED: lysine-specific histone demethyla... 263 3e-68
ref|XP_003530008.1| PREDICTED: lysine-specific histone demethyla... 262 4e-68
ref|XP_002886450.1| amine oxidase family protein [Arabidopsis ly... 189 5e-46
gb|AAF19542.1|AC007190_10 F23N19.18 [Arabidopsis thaliana] 188 8e-46
ref|NP_176471.1| Lysine-specific histone demethylase 1-1 [Arabid... 188 8e-46
>ref|XP_003533370.1| PREDICTED: lysine-specific histone demethylase 1 homolog 1-like
[Glycine max]
Length = 1388
Score = 263 bits (671), Expect = 3e-68
Identities = 144/215 (66%), Positives = 155/215 (72%)
Frame = -2
Query: 645 PQPASPSNDVAMSPQNENPIILDLSEDQDSSLPIQTTPEPAVLXXXXXXXDHHXXXXXXX 466
PQ SP NDVAMSPQN SED DSSLP QTTPEPAV
Sbjct: 619 PQSGSPENDVAMSPQNS-------SEDPDSSLPTQTTPEPAV------------PDSPDS 659
Query: 465 XXXXNSGPPQPXXXXXXXKFFTELTATTSLAKNRRNEVAKDCDVEALIAISVGFPVDSLT 286
P P KFFTELT S RRN+VAKDCDVEALIAISVGFPVDSLT
Sbjct: 660 ATTRPDPNPPPRKRRRRKKFFTELTTGPS---TRRNDVAKDCDVEALIAISVGFPVDSLT 716
Query: 285 EEEIEANVVSTIGGSEQSNYIVVRNHILARWRSNVTTWLTYDRALRSIRSEHKGLVESAY 106
EEEIEANVVST+GGSEQSNYIVVRNHILARWRSNV+ WLT+DRALRSIRSEHKGLVE+AY
Sbjct: 717 EEEIEANVVSTVGGSEQSNYIVVRNHILARWRSNVSVWLTHDRALRSIRSEHKGLVETAY 776
Query: 105 RFLIEHGYINFGVAPEIKAAKSRPFDGPERGTVVV 1
RFL+EHGYINFG+A EI+ K +PFDG +RGTV+V
Sbjct: 777 RFLLEHGYINFGLAQEIQTLKLKPFDGSDRGTVIV 811
>ref|XP_003530008.1| PREDICTED: lysine-specific histone demethylase 1 homolog 1-like
[Glycine max]
Length = 1336
Score = 262 bits (670), Expect = 4e-68
Identities = 144/220 (65%), Positives = 157/220 (71%)
Frame = -2
Query: 660 PTSEAPQPASPSNDVAMSPQNENPIILDLSEDQDSSLPIQTTPEPAVLXXXXXXXDHHXX 481
P PQ SP NDVAMSP N + + + SED DSS P QTTPEPAV
Sbjct: 594 PPPPPPQSVSPENDVAMSPHNLD--LQNSSEDPDSSFPTQTTPEPAV------------P 639
Query: 480 XXXXXXXXXNSGPPQPXXXXXXXKFFTELTATTSLAKNRRNEVAKDCDVEALIAISVGFP 301
P P KFFTELT TS RRN+VAKDCDVEALIAISVGFP
Sbjct: 640 DSPDSTTTRPDPNPPPRKRRRRKKFFTELTTGTS---TRRNDVAKDCDVEALIAISVGFP 696
Query: 300 VDSLTEEEIEANVVSTIGGSEQSNYIVVRNHILARWRSNVTTWLTYDRALRSIRSEHKGL 121
VDSLTEEEIEANVVST+GGSEQSNYIVVRNHILARWRSNV+ WLT+D+ALRSIRSEHKGL
Sbjct: 697 VDSLTEEEIEANVVSTVGGSEQSNYIVVRNHILARWRSNVSVWLTHDQALRSIRSEHKGL 756
Query: 120 VESAYRFLIEHGYINFGVAPEIKAAKSRPFDGPERGTVVV 1
VE+AYRFL+EHGYINFG+A EIK K +PFDG RGTV+V
Sbjct: 757 VETAYRFLLEHGYINFGLAHEIKTLKQKPFDGSYRGTVIV 796
>ref|XP_002886450.1| amine oxidase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297332291|gb|EFH62709.1| amine oxidase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 840
Score = 189 bits (480), Expect = 5e-46
Identities = 94/136 (69%), Positives = 109/136 (80%)
Frame = -2
Query: 408 FFTELTATTSLAKNRRNEVAKDCDVEALIAISVGFPVDSLTEEEIEANVVSTIGGSEQSN 229
FFTE+ A + ++NRR V K+ D EALIA+SVGFPV SLTEEEIEANVVS IGG +Q+N
Sbjct: 131 FFTEINANPAFSRNRRTSVGKEVDSEALIAMSVGFPVYSLTEEEIEANVVSIIGGKDQAN 190
Query: 228 YIVVRNHILARWRSNVTTWLTYDRALRSIRSEHKGLVESAYRFLIEHGYINFGVAPEIKA 49
YIVVRNHI+A WRSNV+ WLT D AL SIR+EHK LV++AY FL+EHGYINFG+AP IK
Sbjct: 191 YIVVRNHIIALWRSNVSNWLTRDHALESIRAEHKNLVDTAYNFLLEHGYINFGLAPVIKE 250
Query: 48 AKSRPFDGPERGTVVV 1
AK R FDG E VVV
Sbjct: 251 AKLRSFDGVEPPNVVV 266
>gb|AAF19542.1|AC007190_10 F23N19.18 [Arabidopsis thaliana]
Length = 1794
Score = 188 bits (478), Expect = 8e-46
Identities = 94/136 (69%), Positives = 109/136 (80%)
Frame = -2
Query: 408 FFTELTATTSLAKNRRNEVAKDCDVEALIAISVGFPVDSLTEEEIEANVVSTIGGSEQSN 229
FFTE+ A + ++NRR V K+ D EALIA+SVGFPV SLTEEEIEANVVS IGG +Q+N
Sbjct: 135 FFTEINANPAFSRNRRTSVGKEVDSEALIAMSVGFPVYSLTEEEIEANVVSIIGGKDQAN 194
Query: 228 YIVVRNHILARWRSNVTTWLTYDRALRSIRSEHKGLVESAYRFLIEHGYINFGVAPEIKA 49
YIVVRNHI+A WRSNV+ WLT D AL SIR+EHK LV++AY FL+EHGYINFG+AP IK
Sbjct: 195 YIVVRNHIIALWRSNVSNWLTRDHALESIRAEHKTLVDTAYNFLLEHGYINFGLAPVIKE 254
Query: 48 AKSRPFDGPERGTVVV 1
AK R FDG E VVV
Sbjct: 255 AKLRSFDGVEPPNVVV 270
>ref|NP_176471.1| Lysine-specific histone demethylase 1-1 [Arabidopsis thaliana]
gi|75161368|sp|Q8VXV7.1|LDL1_ARATH RecName:
Full=Lysine-specific histone demethylase 1 homolog 1;
AltName: Full=Flavin-containing amine oxidase
domain-containing protein 1; AltName: Full=Protein
LSD1-LIKE 1 gi|18377829|gb|AAL67101.1|
At1g62830/F23N19_19 [Arabidopsis thaliana]
gi|23505983|gb|AAN28851.1| At1g62830/F23N19_19
[Arabidopsis thaliana] gi|332195889|gb|AEE34010.1|
Lysine-specific histone demethylase 1-1 [Arabidopsis
thaliana]
Length = 844
Score = 188 bits (478), Expect = 8e-46
Identities = 94/136 (69%), Positives = 109/136 (80%)
Frame = -2
Query: 408 FFTELTATTSLAKNRRNEVAKDCDVEALIAISVGFPVDSLTEEEIEANVVSTIGGSEQSN 229
FFTE+ A + ++NRR V K+ D EALIA+SVGFPV SLTEEEIEANVVS IGG +Q+N
Sbjct: 135 FFTEINANPAFSRNRRTSVGKEVDSEALIAMSVGFPVYSLTEEEIEANVVSIIGGKDQAN 194
Query: 228 YIVVRNHILARWRSNVTTWLTYDRALRSIRSEHKGLVESAYRFLIEHGYINFGVAPEIKA 49
YIVVRNHI+A WRSNV+ WLT D AL SIR+EHK LV++AY FL+EHGYINFG+AP IK
Sbjct: 195 YIVVRNHIIALWRSNVSNWLTRDHALESIRAEHKTLVDTAYNFLLEHGYINFGLAPVIKE 254
Query: 48 AKSRPFDGPERGTVVV 1
AK R FDG E VVV
Sbjct: 255 AKLRSFDGVEPPNVVV 270