BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018801
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33315.1| unknown [Lotus japonicus]                               70   8e-17
gb|ACU14088.1| unknown [Glycine max]                                   75   1e-16
ref|XP_003597086.1| Cytochrome b6-f complex iron-sulfur subunit ...    71   1e-15
sp|P26291.1|UCRIA_PEA RecName: Full=Cytochrome b6-f complex iron...    67   2e-14
ref|XP_003540878.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome b...    62   1e-13

>gb|AFK33315.1| unknown [Lotus japonicus]
          Length = 227

 Score = 70.5 bits (171), Expect(2) = 8e-17
 Identities = 38/51 (74%), Positives = 44/51 (86%), Gaps = 3/51 (5%)
 Frame = +3

Query: 114 RTQMMGKAKGMRMITCQASSIPADRVPDMQ---LMNLLLLGAISLPTAGML 257
           R QM+GKAKG+R I C A+SIPADRVPDM+   L+NLLLLGAISLP+AGML
Sbjct: 34  RNQMVGKAKGIR-IACMATSIPADRVPDMEKRKLLNLLLLGAISLPSAGML 83



 Score = 41.2 bits (95), Expect(2) = 8e-17
 Identities = 23/32 (71%), Positives = 25/32 (78%), Gaps = 3/32 (9%)
 Frame = +1

Query: 19  TTLSP---AQLCCGKSGILCPSHSQALVVKPA 105
           TTLSP   +QLC GKSGI CP  SQAL+VKPA
Sbjct: 4   TTLSPVTPSQLCSGKSGIFCP--SQALLVKPA 33


>gb|ACU14088.1| unknown [Glycine max]
          Length = 227

 Score = 75.1 bits (183), Expect(2) = 1e-16
 Identities = 41/51 (80%), Positives = 45/51 (88%), Gaps = 3/51 (5%)
 Frame = +3

Query: 114 RTQMMGKAKGMRMITCQASSIPADRVPDM---QLMNLLLLGAISLPTAGML 257
           + QMMGK+KGMR I CQA+SIPADRVPDM   QLMNLLLLGAISLP+AGML
Sbjct: 34  KRQMMGKSKGMR-IACQATSIPADRVPDMGKRQLMNLLLLGAISLPSAGML 83



 Score = 35.8 bits (81), Expect(2) = 1e-16
 Identities = 21/31 (67%), Positives = 23/31 (74%), Gaps = 3/31 (9%)
 Frame = +1

Query: 19  TTLSP---AQLCCGKSGILCPSHSQALVVKP 102
           TTLSP   +QLC GKSGI  P  SQAL+VKP
Sbjct: 4   TTLSPTTPSQLCSGKSGIFSP--SQALLVKP 32


>ref|XP_003597086.1| Cytochrome b6-f complex iron-sulfur subunit [Medicago truncatula]
           gi|217071232|gb|ACJ83976.1| unknown [Medicago
           truncatula] gi|355486134|gb|AES67337.1| Cytochrome b6-f
           complex iron-sulfur subunit [Medicago truncatula]
           gi|388498486|gb|AFK37309.1| unknown [Medicago
           truncatula]
          Length = 229

 Score = 71.2 bits (173), Expect(2) = 1e-15
 Identities = 38/51 (74%), Positives = 43/51 (84%), Gaps = 3/51 (5%)
 Frame = +3

Query: 114 RTQMMGKAKGMRMITCQASSIPADRVPDM---QLMNLLLLGAISLPTAGML 257
           RTQM+GK KGM  ITCQA+ IPADRVPDM   + +NLLLLGA+SLPTAGML
Sbjct: 34  RTQMIGKGKGMS-ITCQATGIPADRVPDMSKRETLNLLLLGALSLPTAGML 83



 Score = 36.6 bits (83), Expect(2) = 1e-15
 Identities = 22/34 (64%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
 Frame = +1

Query: 19  TTLSPA---QLCCGKSGILCPSHSQALVVKPAGT 111
           TTLSPA   QLC GKSGI CP  S  L+VKP  T
Sbjct: 4   TTLSPATPSQLCSGKSGISCP--SIGLLVKPTRT 35


>sp|P26291.1|UCRIA_PEA RecName: Full=Cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic; AltName:
           Full=Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein; AltName: Full=Rieske iron-sulfur
           protein; Short=ISP; Short=RISP; Flags: Precursor
           gi|20832|emb|CAA45151.1| chloroplast Rieske FeS protein
           [Pisum sativum]
          Length = 230

 Score = 67.0 bits (162), Expect(2) = 2e-14
 Identities = 38/52 (73%), Positives = 44/52 (84%), Gaps = 4/52 (7%)
 Frame = +3

Query: 114 RTQMMGKA-KGMRMITCQASSIPADRVPDM---QLMNLLLLGAISLPTAGML 257
           RTQM G+  KGM+ ITCQA+SIPADRVPDM   + +NLLLLGA+SLPTAGML
Sbjct: 34  RTQMTGRGNKGMK-ITCQATSIPADRVPDMSKRKTLNLLLLGALSLPTAGML 84



 Score = 37.0 bits (84), Expect(2) = 2e-14
 Identities = 22/34 (64%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
 Frame = +1

Query: 19  TTLSP---AQLCCGKSGILCPSHSQALVVKPAGT 111
           TTLSP   +QLC GKSGI CP  S AL+VKP  T
Sbjct: 4   TTLSPTTPSQLCSGKSGISCP--SIALLVKPTRT 35


>ref|XP_003540878.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome b6-f complex iron-sulfur
           subunit, chloroplastic-like [Glycine max]
          Length = 134

 Score = 62.0 bits (149), Expect(2) = 1e-13
 Identities = 34/51 (66%), Positives = 41/51 (80%), Gaps = 3/51 (5%)
 Frame = +3

Query: 114 RTQMMGKAKGMRMITCQASSIPADRVPDM---QLMNLLLLGAISLPTAGML 257
           ++QM GK KG+R IT QA+S PADR+PD+   QLMNLLLLGA SLPT+ ML
Sbjct: 34  KSQMXGKGKGVR-ITYQATSFPADRIPDIGKRQLMNLLLLGAXSLPTSSML 83



 Score = 38.9 bits (89), Expect(2) = 1e-13
 Identities = 22/31 (70%), Positives = 23/31 (74%), Gaps = 3/31 (9%)
 Frame = +1

Query: 19  TTLS---PAQLCCGKSGILCPSHSQALVVKP 102
           TTLS   P+QLC GKSGI CP  SQAL VKP
Sbjct: 4   TTLSAATPSQLCSGKSGIFCP--SQALFVKP 32