BLASTX nr result

ID: Glycyrrhiza23_contig00018756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018756
         (1137 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526877.1| PREDICTED: psbP domain-containing protein 2,...   277   3e-72
ref|XP_003523215.1| PREDICTED: psbP domain-containing protein 2,...   273   6e-71
ref|XP_003602661.1| PsbP domain-containing protein [Medicago tru...   268   2e-69
ref|XP_004147342.1| PREDICTED: psbP domain-containing protein 2,...   256   6e-66
ref|XP_002534226.1| conserved hypothetical protein [Ricinus comm...   254   2e-65

>ref|XP_003526877.1| PREDICTED: psbP domain-containing protein 2, chloroplastic-like
           [Glycine max]
          Length = 251

 Score =  277 bits (709), Expect = 3e-72
 Identities = 158/233 (67%), Positives = 170/233 (72%)
 Frame = +2

Query: 260 VSILFPKXXXXXXXXXXXXXCIIHEPSHKDMQLLSPCFSKRKXXXXXXXXXXXWGVLPPI 439
           VSIL PK             CI    S+KDM L +  FSKR            WG    +
Sbjct: 32  VSILLPKCTSPT--------CIYE--SNKDMHL-ALSFSKRNLNLSILLTTFLWGE-GVL 79

Query: 440 LPXXXXXXXXXXXXXXXRYTDSKEGFTLLTPSSWTKVDKPGATVLFQEENILGSNNIGVV 619
           +P               RYTDS+EGFTLLTPSSWTKVDK GATVLFQE + +GSNNIGVV
Sbjct: 80  MPNARDALLLAQELELQRYTDSEEGFTLLTPSSWTKVDKAGATVLFQEAD-MGSNNIGVV 138

Query: 620 VNPVRLATLGEFGTPQFVADKLLQAERRKESTNEAEVITVGERSGKGSLQIYEFEYRLDS 799
           VNPVRL TL EFGTPQFVADKLLQAERRKEST EAE+ITV ERSG+G LQIYEFEY++DS
Sbjct: 139 VNPVRLKTLEEFGTPQFVADKLLQAERRKESTKEAELITVAERSGEGGLQIYEFEYKVDS 198

Query: 800 TRGGMKRIFSAAFVASKKLYLLNIAHSDKPESPLDPQKRMILEQVLHSFDAAS 958
           TRGGMKRIFSAAFVASKKLYLLNI HSDKPESPLDP KRMILEQVLHSFDAA+
Sbjct: 199 TRGGMKRIFSAAFVASKKLYLLNIVHSDKPESPLDPHKRMILEQVLHSFDAAA 251


>ref|XP_003523215.1| PREDICTED: psbP domain-containing protein 2, chloroplastic-like
           [Glycine max]
          Length = 241

 Score =  273 bits (698), Expect = 6e-71
 Identities = 158/233 (67%), Positives = 169/233 (72%)
 Frame = +2

Query: 260 VSILFPKXXXXXXXXXXXXXCIIHEPSHKDMQLLSPCFSKRKXXXXXXXXXXXWGVLPPI 439
           VSILFP+               IHE SHKD+ L +P FSKR            WG    +
Sbjct: 26  VSILFPRSTSPTC---------IHE-SHKDIHL-APSFSKRSILLTTFL----WGQ-GML 69

Query: 440 LPXXXXXXXXXXXXXXXRYTDSKEGFTLLTPSSWTKVDKPGATVLFQEENILGSNNIGVV 619
           LP               RYTDS EGFTLLTPSSWTKVDK GATVLFQE + +GSNNIGVV
Sbjct: 70  LPNARDALLLAQELELQRYTDSDEGFTLLTPSSWTKVDKAGATVLFQEAD-MGSNNIGVV 128

Query: 620 VNPVRLATLGEFGTPQFVADKLLQAERRKESTNEAEVITVGERSGKGSLQIYEFEYRLDS 799
           VNPVRL TL EFGTPQFVADKLLQAERRKEST E E+ITV ERSG+G LQIYEFEY++DS
Sbjct: 129 VNPVRLKTLEEFGTPQFVADKLLQAERRKESTKEVELITVAERSGEGGLQIYEFEYKVDS 188

Query: 800 TRGGMKRIFSAAFVASKKLYLLNIAHSDKPESPLDPQKRMILEQVLHSFDAAS 958
           TRGGMKRIFSAAFVASKKLYLLNI HSDK E PLDP KRMILEQVLHSFDAA+
Sbjct: 189 TRGGMKRIFSAAFVASKKLYLLNIVHSDKLEIPLDPNKRMILEQVLHSFDAAA 241


>ref|XP_003602661.1| PsbP domain-containing protein [Medicago truncatula]
           gi|358348394|ref|XP_003638232.1| PsbP domain-containing
           protein [Medicago truncatula]
           gi|355491709|gb|AES72912.1| PsbP domain-containing
           protein [Medicago truncatula]
           gi|355504167|gb|AES85370.1| PsbP domain-containing
           protein [Medicago truncatula]
          Length = 237

 Score =  268 bits (684), Expect = 2e-69
 Identities = 157/265 (59%), Positives = 170/265 (64%)
 Frame = +2

Query: 164 MALKSFSTLSQTISTLXXXXXXXXXXXXXXXXVSILFPKXXXXXXXXXXXXXCIIHEPSH 343
           MALKSFSTLS   +TL                   L PK               IH+ SH
Sbjct: 1   MALKSFSTLSH--NTLFHKLIHASSSSPT------LIPKSTSPSC---------IHD-SH 42

Query: 344 KDMQLLSPCFSKRKXXXXXXXXXXXWGVLPPILPXXXXXXXXXXXXXXXRYTDSKEGFTL 523
           K M    PCF KRK           W V P +L                RYTDS EGFTL
Sbjct: 43  KQM----PCFGKRKLNLTLLLTPFLWSVFPNVL-----LSAQELITELQRYTDSNEGFTL 93

Query: 524 LTPSSWTKVDKPGATVLFQEENILGSNNIGVVVNPVRLATLGEFGTPQFVADKLLQAERR 703
             PSSWTKVDK GAT LFQ+ N  GSNNIGVVVNPVRL  LG+FGTPQFV DKLLQAERR
Sbjct: 94  QIPSSWTKVDKAGATALFQDPN-KGSNNIGVVVNPVRLTALGDFGTPQFVVDKLLQAERR 152

Query: 704 KESTNEAEVITVGERSGKGSLQIYEFEYRLDSTRGGMKRIFSAAFVASKKLYLLNIAHSD 883
           KEST EAEV+TV ERSGKG LQ+YEFEY++DSTRGG+KRIFSAAFVASKK+Y LNI HSD
Sbjct: 153 KESTKEAEVVTVAERSGKGGLQVYEFEYKIDSTRGGLKRIFSAAFVASKKIYFLNIVHSD 212

Query: 884 KPESPLDPQKRMILEQVLHSFDAAS 958
            PESPLD  KRM+LEQVLHSFD+ S
Sbjct: 213 NPESPLDQHKRMMLEQVLHSFDSTS 237


>ref|XP_004147342.1| PREDICTED: psbP domain-containing protein 2, chloroplastic-like
           [Cucumis sativus] gi|449523543|ref|XP_004168783.1|
           PREDICTED: psbP domain-containing protein 2,
           chloroplastic-like [Cucumis sativus]
          Length = 357

 Score =  256 bits (655), Expect = 6e-66
 Identities = 128/155 (82%), Positives = 141/155 (90%)
 Frame = +2

Query: 491 RYTDSKEGFTLLTPSSWTKVDKPGATVLFQEENILGSNNIGVVVNPVRLATLGEFGTPQF 670
           RYTDSKEGFTLL PSSW KVDK GATVLF+E N  GSNN+GVVVNPVRL +LGEFGTPQF
Sbjct: 201 RYTDSKEGFTLLRPSSWVKVDKAGATVLFEEGN-KGSNNVGVVVNPVRLTSLGEFGTPQF 259

Query: 671 VADKLLQAERRKESTNEAEVITVGERSGKGSLQIYEFEYRLDSTRGGMKRIFSAAFVASK 850
           VADKL+QAE+RKEST +A V+ V ERSG+G LQ+YEFEY +DSTRGGMKRIFSAAFVASK
Sbjct: 260 VADKLIQAEKRKESTKDAAVVGVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASK 319

Query: 851 KLYLLNIAHSDKPESPLDPQKRMILEQVLHSFDAA 955
           KLY+LNI+HSDKPESPLD QKRM+LEQVLHSFDAA
Sbjct: 320 KLYILNISHSDKPESPLDSQKRMMLEQVLHSFDAA 354


>ref|XP_002534226.1| conserved hypothetical protein [Ricinus communis]
           gi|223525676|gb|EEF28158.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 244

 Score =  254 bits (650), Expect = 2e-65
 Identities = 134/205 (65%), Positives = 154/205 (75%)
 Frame = +2

Query: 335 PSHKDMQLLSPCFSKRKXXXXXXXXXXXWGVLPPILPXXXXXXXXXXXXXXXRYTDSKEG 514
           P+ K+  +LS C+SKRK             ++P  +                RYTD+KEG
Sbjct: 43  PNRKEAVILSFCWSKRKLILALSINGSLLNIIPDTI-------LAIEMGELERYTDAKEG 95

Query: 515 FTLLTPSSWTKVDKPGATVLFQEENILGSNNIGVVVNPVRLATLGEFGTPQFVADKLLQA 694
           FTLL PS++ KVDK GATVLF+E N  GSNNIGVVVNPVRLATLGEFGTPQFVADKL+QA
Sbjct: 96  FTLLRPSTYVKVDKAGATVLFEEVN-KGSNNIGVVVNPVRLATLGEFGTPQFVADKLIQA 154

Query: 695 ERRKESTNEAEVITVGERSGKGSLQIYEFEYRLDSTRGGMKRIFSAAFVASKKLYLLNIA 874
           E+RKEST + E+I V ER G G LQ+YEFEYR+DSTRGG+KRIFSAAFVASKKLYLLNI 
Sbjct: 155 EKRKESTKDVELIGVAERPGHGGLQVYEFEYRVDSTRGGVKRIFSAAFVASKKLYLLNIT 214

Query: 875 HSDKPESPLDPQKRMILEQVLHSFD 949
           HSDKPESPLDP  RM+LE+VLHSFD
Sbjct: 215 HSDKPESPLDPHTRMMLEEVLHSFD 239


Top