BLASTX nr result

ID: Glycyrrhiza23_contig00018750 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018750
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543504.1| PREDICTED: cold-inducible RNA-binding protei...   135   4e-30
ref|XP_003597341.1| Cold-inducible RNA-binding protein [Medicago...   130   2e-28
ref|XP_003547422.1| PREDICTED: cold-inducible RNA-binding protei...   125   7e-27
ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protei...   117   1e-24
ref|XP_002533105.1| cold-inducible RNA binding protein, putative...   115   7e-24

>ref|XP_003543504.1| PREDICTED: cold-inducible RNA-binding protein-like [Glycine max]
          Length = 86

 Score =  135 bits (341), Expect = 4e-30
 Identities = 68/86 (79%), Positives = 78/86 (90%)
 Frame = +1

Query: 109 MTQRIGTKLFVSRLSFFTTKEQLMKLFSLFGAVTQANLVVDPRTQRPKGFGFVSYQSEIE 288
           M+QRIGTKLFV RLSF+TT+EQL KLFS FG VTQA+L +DP T+RPKGFGFVS++SEIE
Sbjct: 1   MSQRIGTKLFVHRLSFYTTQEQLKKLFSPFGLVTQADLALDPITKRPKGFGFVSFKSEIE 60

Query: 289 AEKAMKAMNGRIVDGRLIFVEPANKK 366
           AEKA KAMNGRIV+GRLI VEPAN+K
Sbjct: 61  AEKACKAMNGRIVNGRLILVEPANEK 86


>ref|XP_003597341.1| Cold-inducible RNA-binding protein [Medicago truncatula]
           gi|355486389|gb|AES67592.1| Cold-inducible RNA-binding
           protein [Medicago truncatula]
           gi|388509994|gb|AFK43063.1| unknown [Medicago
           truncatula]
          Length = 89

 Score =  130 bits (327), Expect = 2e-28
 Identities = 65/86 (75%), Positives = 74/86 (86%)
 Frame = +1

Query: 109 MTQRIGTKLFVSRLSFFTTKEQLMKLFSLFGAVTQANLVVDPRTQRPKGFGFVSYQSEIE 288
           M+QRIGTKLFVSRLSF+TT++QL  LFS FG +T+A L+ D  TQRPKGFGFVSY+SEIE
Sbjct: 1   MSQRIGTKLFVSRLSFYTTQQQLESLFSPFGVLTEATLITDQNTQRPKGFGFVSYKSEIE 60

Query: 289 AEKAMKAMNGRIVDGRLIFVEPANKK 366
           AEKA KA+NGRIVDGRLIFVE A  K
Sbjct: 61  AEKARKALNGRIVDGRLIFVEHAKPK 86


>ref|XP_003547422.1| PREDICTED: cold-inducible RNA-binding protein-like [Glycine max]
          Length = 86

 Score =  125 bits (313), Expect = 7e-27
 Identities = 62/86 (72%), Positives = 75/86 (87%)
 Frame = +1

Query: 109 MTQRIGTKLFVSRLSFFTTKEQLMKLFSLFGAVTQANLVVDPRTQRPKGFGFVSYQSEIE 288
           M++RIGTKLFV R+  +TT+EQL KLFS FG VTQA+L +DP T+RPKGFGFVS++SEIE
Sbjct: 1   MSRRIGTKLFVHRIMLYTTQEQLKKLFSPFGLVTQADLALDPITKRPKGFGFVSFKSEIE 60

Query: 289 AEKAMKAMNGRIVDGRLIFVEPANKK 366
           AEKA++AMNGRIV GRLI VE AN+K
Sbjct: 61  AEKALRAMNGRIVSGRLILVELANEK 86


>ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
           gi|297746123|emb|CBI16179.3| unnamed protein product
           [Vitis vinifera]
          Length = 112

 Score =  117 bits (294), Expect = 1e-24
 Identities = 56/88 (63%), Positives = 73/88 (82%)
 Frame = +1

Query: 115 QRIGTKLFVSRLSFFTTKEQLMKLFSLFGAVTQANLVVDPRTQRPKGFGFVSYQSEIEAE 294
           +R  +++FV+RLS +TT E+L+++FS FG VTQA L+ DP+TQRPKGFGFV ++SE++AE
Sbjct: 21  RRFSSEIFVTRLSGYTTNEELIEMFSPFGVVTQARLIKDPKTQRPKGFGFVKFESEVDAE 80

Query: 295 KAMKAMNGRIVDGRLIFVEPANKK*PGE 378
           KA+KAMNGRIV GRLIFVE A    PGE
Sbjct: 81  KALKAMNGRIVRGRLIFVEIAKTTRPGE 108


>ref|XP_002533105.1| cold-inducible RNA binding protein, putative [Ricinus communis]
           gi|223527096|gb|EEF29277.1| cold-inducible RNA binding
           protein, putative [Ricinus communis]
          Length = 94

 Score =  115 bits (287), Expect = 7e-24
 Identities = 57/90 (63%), Positives = 72/90 (80%)
 Frame = +1

Query: 109 MTQRIGTKLFVSRLSFFTTKEQLMKLFSLFGAVTQANLVVDPRTQRPKGFGFVSYQSEIE 288
           M  R+G++LFV RLS +TT ++L KLFS FG V +A LV+DPRTQ+PKGFGFV++ SE +
Sbjct: 1   MAIRLGSQLFVGRLSCYTTNQKLEKLFSPFGIVKEARLVLDPRTQKPKGFGFVTFDSESQ 60

Query: 289 AEKAMKAMNGRIVDGRLIFVEPANKK*PGE 378
           A+KA+KAMNGRIVDGRL+FVE A     GE
Sbjct: 61  AQKALKAMNGRIVDGRLLFVEVAKSINSGE 90


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