BLASTX nr result

ID: Glycyrrhiza23_contig00018743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00018743
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601352.1| Tir-nbs-lrr resistance protein [Medicago tru...    87   1e-15
ref|XP_003543819.1| PREDICTED: TMV resistance protein N-like [Gl...    73   3e-11
ref|XP_003594998.1| TMV resistance protein N [Medicago truncatul...    73   3e-11
gb|ABD33387.2| TIR [Medicago truncatula]                               73   3e-11
ref|XP_003595039.1| TMV resistance protein N [Medicago truncatul...    72   7e-11

>ref|XP_003601352.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
            gi|355490400|gb|AES71603.1| Tir-nbs-lrr resistance
            protein [Medicago truncatula]
          Length = 1545

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 64/179 (35%), Positives = 86/179 (48%), Gaps = 3/179 (1%)
 Frame = +1

Query: 1    LEELCIRDCEKLVXXXXXXXXXXQCLELINCSSTSLDT-QGPLLENMLQS-MSCIKSPAP 174
            LE LC+ +C KL             L   NC      + Q  +LENM+Q  ++  +  + 
Sbjct: 1276 LEWLCLDECRKLKFIPKLPVSLRN-LSAANCIYVDTGSVQRSMLENMIQRHLTNFRDRSN 1334

Query: 175  IIQNDGLRLSSYFFCVPGGQVPGMFEFHTTEASITIPPIPKSNLCGFIFCLILSGGTSVN 354
              Q         FF +PG Q+P  F F +TEASI IPPIPKS+LC  IFC+I S G +  
Sbjct: 1335 CFQE--------FFFLPGDQIPCEFYFQSTEASIVIPPIPKSDLCCLIFCIIFSEGLTFF 1386

Query: 355  DIFLDCYIYEHGKEVDGYCLGLYGCVHSPLISDHVL-LWWCGYDIQESGGNHNNSPSFS 528
               L C IY+H KEV  +           L SDHVL + WC Y+     G+   S  ++
Sbjct: 1387 YNNLCCTIYQHKKEVHQWDTNWGN--ERTLFSDHVLIICWCHYNKLVELGSERGSDDYN 1443


>ref|XP_003543819.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 970

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 58/160 (36%), Positives = 82/160 (51%), Gaps = 3/160 (1%)
 Frame = +1

Query: 22   DCEKLVXXXXXXXXXXQCLELINCSSTSLDT---QGPLLENMLQSMSCIKSPAPIIQNDG 192
            DC KLV          +   L  C+ TSLDT   Q  +L++MLQS        P ++   
Sbjct: 775  DCRKLVSLPELPLFLEK---LSACNCTSLDTKITQQQVLQHMLQSR------IPYLRKHY 825

Query: 193  LRLSSYFFCVPGGQVPGMFEFHTTEASITIPPIPKSNLCGFIFCLILSGGTSVNDIFLDC 372
            L+     +  PG  V     FHTT+ SITIP + K  LCGFI+C+ILS G  + +  + C
Sbjct: 826  LKCYDEEYFFPGDHVIDECRFHTTQNSITIPYLQKPELCGFIYCIILSMGPLL-ECDVSC 884

Query: 373  YIYEHGKEVDGYCLGLYGCVHSPLISDHVLLWWCGYDIQE 492
             +Y+ G  V G+   L    +  LISDHV++ +  +DI E
Sbjct: 885  SVYQDGIRV-GWLERL--LEYENLISDHVVILY--HDISE 919


>ref|XP_003594998.1| TMV resistance protein N [Medicago truncatula]
            gi|355484046|gb|AES65249.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1179

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 53/134 (39%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
 Frame = +1

Query: 76   LELINCSSTSLDT---QGPLLENMLQSMSCIKSPAPIIQNDGLRLSSYFFCV-PGGQVPG 243
            L  INC  T LDT   Q  +L+NML        P P           YF  + P  +VP 
Sbjct: 951  LSAINC--TYLDTNSIQREMLKNMLYRFR-FGEPFP----------EYFLSLLPVAEVPW 997

Query: 244  MFEFHTTEASITIPPIPKSNLCGFIFCLILSGGTSVNDIFLDCYIYEHGKEVDGYCLGLY 423
             F+F TTEASI IPPIPK  L   + C+ LS G ++    +DC IY HG   + + +   
Sbjct: 998  GFDFFTTEASIIIPPIPKDGLNQIVLCVFLSEGLNLTFSGVDCTIYNHGDRSNEWSISFV 1057

Query: 424  GCVHSPLISDHVLL 465
              V   +ISDHVLL
Sbjct: 1058 N-VSGAMISDHVLL 1070


>gb|ABD33387.2| TIR [Medicago truncatula]
          Length = 1208

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 53/134 (39%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
 Frame = +1

Query: 76   LELINCSSTSLDT---QGPLLENMLQSMSCIKSPAPIIQNDGLRLSSYFFCV-PGGQVPG 243
            L  INC  T LDT   Q  +L+NML        P P           YF  + P  +VP 
Sbjct: 980  LSAINC--TYLDTNSIQREMLKNMLYRFR-FGEPFP----------EYFLSLLPVAEVPW 1026

Query: 244  MFEFHTTEASITIPPIPKSNLCGFIFCLILSGGTSVNDIFLDCYIYEHGKEVDGYCLGLY 423
             F+F TTEASI IPPIPK  L   + C+ LS G ++    +DC IY HG   + + +   
Sbjct: 1027 GFDFFTTEASIIIPPIPKDGLNQIVLCVFLSEGLNLTFSGVDCTIYNHGDRSNEWSISFV 1086

Query: 424  GCVHSPLISDHVLL 465
              V   +ISDHVLL
Sbjct: 1087 N-VSGAMISDHVLL 1099


>ref|XP_003595039.1| TMV resistance protein N [Medicago truncatula]
            gi|355484087|gb|AES65290.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1128

 Score = 71.6 bits (174), Expect = 7e-11
 Identities = 50/135 (37%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
 Frame = +1

Query: 76   LELINCSSTSLDT---QGPLLENMLQSMSCIKS-PAPIIQNDGLRLSSYFFCVPGGQVPG 243
            L  INC  T LDT   Q  +LENML  +       +P I  +G     +   +P  +VP 
Sbjct: 854  LSAINC--TYLDTNSIQREMLENMLYRLRTGNHFGSPFISPEGF----FNLLLPVAEVPC 907

Query: 244  MFEFHTTEASITIPPIPKSNLCGFIFCLILSGGTSVNDIFLDCYIYEHGKEVDGYCLGLY 423
             F+F TTEASI IPPI K      + C+ LS G ++    ++C IY HG    G+ +  +
Sbjct: 908  GFDFFTTEASIIIPPISKYEFYHIVLCVFLSEGLNLTSSGVNCTIYNHGDRSGGWNIS-F 966

Query: 424  GCVHSPLISDHVLLW 468
              V   +ISDHV+L+
Sbjct: 967  EHVSGAMISDHVMLF 981


Top